RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SEPT14Q6ZU15 432 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 FBXO16Q8IX29 292 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 ARRDC4Q8NCT1 418 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 RDM1Q8NG50 284 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 IL31RAQ8NI17 732 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 PGBD1Q96JS3 809 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 SDF4Q9BRK5 362 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 ZNF577Q9BSK1 485 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 HDAC8Q9BY41 377 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 SEZ6LQ9BYH1 1024 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 RAB34Q9BZG1 259 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 MCOLN1Q9GZU1 580 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 CCDC113Q9H0I3 377 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 AP5M1Q9H0R1 490 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 KCNMB3Q9NPA1 279 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 KCNH7Q9NS40 1196 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 CHMP5Q9NZZ3 219 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 DDX20Q9UHI6 824 aaKnown RBP6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 TCHHQ07283 1943 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 MYH9P35579 1960 aaKnown RBP6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 KAT6AQ92794 2004 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 MYH15Q9Y2K3 1946 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 HTTP42858 3142 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 IPO5O00410 1097 aaKnown RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 ADAMTS3O15072 1205 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 SLC26A4O43511 780 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 EDIL3O43854 480 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 MARCH6O60337 910 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 DKC1O60832 514 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 DTNBO60941 627 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 PPFIA4O75335 1185 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 CABYRO75952 493 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 PAPLNO95428 1278 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 PRAMEF1O95521 474 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 YEATS4O95619 227 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 CCL5P13501 91 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 KCNA2P16389 499 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 CST5P28325 142 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 CNGA1P29973 690 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 SFNP31947 248 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 ADCYAP1R1P41586 468 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 CPT1AP50416 773 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 PMS1P54277 932 aaKnown RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 AUHQ13825 339 aaKnown RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 PDIA5Q14554 519 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 CALCRLQ16602 461 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 TMEM266Q2M3C6 531 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 EARS2Q5JPH6 523 aaKnown RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 PRAMEF19Q5SWL8 479 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 CELF3Q5SZQ8 465 aaKnown RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 ZPBP2Q6X784 338 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 EEPD1Q7L9B9 569 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 RNF180Q86T96 592 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 TLK2Q86UE8 772 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 DHX37Q8IY37 1157 aaKnown RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 SMAP1Q8IYB5 467 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 PCSK9Q8NBP7 692 aaKnown RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 TRPV1Q8NER1 839 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 PPTC7Q8NI37 304 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 ETNPPLQ8TBG4 499 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 SH3TC2Q8TF17 1288 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 SLC5A5Q92911 643 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 TNPO1Q92973 898 aaKnown RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 LENG9Q96B70 501 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 DEPDC7Q96QD5 511 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 MTMR9Q96QG7 549 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 TEKT3Q9BXF9 490 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 UPF3AQ9H1J1 476 aaKnown RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 MLXIPQ9HAP2 919 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 AGO4Q9HCK5 861 aaKnown RBP6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 GPATCH2Q9NW75 528 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 GFOD1Q9NXC2 390 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 SNTG2Q9NY99 539 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 RTEL1Q9NZ71 1219 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 SLAMF8Q9P0V8 285 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 SLC9A2Q9UBY0 812 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 DUSP13Q9UII6 198 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 CTNND2Q9UQB3 1225 aa6.15□□□□□ -1.42
HMGB1P44-201ENST00000508597 NOP56O00567 594 aaKnown RBP6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 MSH4O15457 936 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 GAS7O60861 476 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 PPP6R2O75170 966 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 PSMD10O75832 226 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 FARP2O94887 1054 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 ARIH2O95376 493 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 SGPL1O95470 568 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 TDP2O95551 362 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 GGPS1O95749 300 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 OR52Z1P0C646 297 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 ARP10275 920 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 MUTP22033 750 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 UBA1P22314 1058 aaKnown RBP6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 CCND3P30281 292 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 MCM7P33993 719 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 CTSKP43235 329 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 SLC26A2P50443 739 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 TOB1P50616 345 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 JAK3P52333 1124 aa6.14□□□□□ -1.43
HMGB1P44-201ENST00000508597 KRT85P78386 507 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms