RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 C11orf70Q9BRQ4 267 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 DCLK3Q9C098 648 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 CHST7Q9NS84 486 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 GGA3Q9NZ52 723 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 CNTNAP2Q9UHC6 1331 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 DOCK5Q9H7D0 1870 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 GSTTP1A0A1W2PQM5 241 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 ADCY3O60266 1144 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 UBA1P22314 1058 aaKnown RBP17.63■□□□□ 0.41
VCAN-204ENST00000502527 MMP13P45452 471 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 AP3M2P53677 418 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 PPARDQ03181 441 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 C1QBPQ07021 282 aaKnown RBP17.63■□□□□ 0.41
VCAN-204ENST00000502527 MAMLD1Q13495 774 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 NCOA4Q13772 614 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 TARBP2Q15633 366 aaKnown RBP17.63■□□□□ 0.41
VCAN-204ENST00000502527 C2CD6Q53TS8 623 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 CCDC25Q86WR0 208 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 PASD1Q8IV76 773 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 ATL2Q8NHH9 583 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 TRPM4Q8TD43 1214 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 IMPG2Q9BZV3 1241 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 ROPN1BQ9BZX4 212 aaPredicted RBP17.63■□□□□ 0.41
VCAN-204ENST00000502527 ROPN1Q9HAT0 212 aaPredicted RBP17.63■□□□□ 0.41
VCAN-204ENST00000502527 NUB1Q9Y5A7 615 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 ZNFX1Q9P2E3 1918 aaKnown RBP17.63■□□□□ 0.41
VCAN-204ENST00000502527 UMODL1Q5DID0 1318 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 SMIM23A6NLE4 172 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 RASGRF2O14827 1237 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 THAP12O43422 761 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 FARP2O94887 1054 aaPredicted RBP17.63■□□□□ 0.41
VCAN-204ENST00000502527 CAV1Q03135 178 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 CAPSQ13938 189 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 NEDD9Q14511 834 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 ERMARDQ5T6L9 678 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 PLEKHA7Q6IQ23 1121 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 LLGL2Q6P1M3 1020 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 ZPBP2Q6X784 338 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 CCDC50Q8IVM0 306 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 OR5B17Q8NGF7 314 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.63■□□□□ 0.41
VCAN-204ENST00000502527 ATG4AQ8WYN0 398 aa17.63■□□□□ 0.41
VCAN-204ENST00000502527 XPO6Q96QU8 1125 aaKnown RBP17.63■□□□□ 0.41
VCAN-204ENST00000502527 C5orf60A6NFR6 353 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 CFHP08603 1231 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 STAT5BP51692 787 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 EFNA5P52803 228 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 LBX2Q6XYB7 198 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 KATNAL2Q8IYT4 538 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 MDM1Q8TC05 714 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 PCYT2Q99447 389 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 DDX20Q9UHI6 824 aaKnown RBP17.62■□□□□ 0.41
VCAN-204ENST00000502527 MAFO75444 373 aaPredicted RBP17.62■□□□□ 0.41
VCAN-204ENST00000502527 GRM1Q13255 1194 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 ZNF568Q3ZCX4 644 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 MFSD5Q6N075 450 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 RHBDF2Q6PJF5 856 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 C6orf89Q6UWU4 347 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 MMS22LQ6ZRQ5 1243 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 PACS2Q86VP3 889 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 RIOX2Q8IUF8 465 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 BRSK2Q8IWQ3 736 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 UHMK1Q8TAS1 419 aaKnown RBP17.62■□□□□ 0.41
VCAN-204ENST00000502527 EPS8L3Q8TE67 593 aaKnown RBP17.62■□□□□ 0.41
VCAN-204ENST00000502527 SELENOSQ9BQE4 189 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 MTFR1LQ9H019 292 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 PARVAQ9NVD7 372 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 TMEM51Q9NW97 253 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 PPME1Q9Y570 386 aa17.62■□□□□ 0.41
VCAN-204ENST00000502527 BRCA1P38398 1863 aaKnown RBP17.62■□□□□ 0.41
VCAN-204ENST00000502527 MYH9P35579 1960 aaKnown RBP17.61■□□□□ 0.41
VCAN-204ENST00000502527 TP73O15350 636 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 EDN1P05305 212 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 RALAP11233 206 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 HARSP12081 509 aaKnown RBP17.61■□□□□ 0.41
VCAN-204ENST00000502527 ATF2P15336 505 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 CHN1P15882 459 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 EDNRBP24530 442 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 IVDP26440 423 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 IFI35P80217 286 aaPredicted RBP17.61■□□□□ 0.41
VCAN-204ENST00000502527 IFT88Q13099 833 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 KLF1Q13351 362 aaPredicted RBP17.61■□□□□ 0.41
VCAN-204ENST00000502527 CCNG2Q16589 344 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 UBAP2Q5T6F2 1119 aaKnown RBP17.61■□□□□ 0.41
VCAN-204ENST00000502527 RNF187Q5TA31 235 aaPredicted RBP17.61■□□□□ 0.41
VCAN-204ENST00000502527 CPLX4Q7Z7G2 160 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 EXD1Q8NHP7 514 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 CHMP6Q96FZ7 201 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 CCDC114Q96M63 670 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 HERPUD2Q9BSE4 406 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 GPRC5DQ9NZD1 345 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 SSC5DA1L4H1 1573 aa17.61■□□□□ 0.41
VCAN-204ENST00000502527 TLR3O15455 904 aaKnown RBP17.6■□□□□ 0.41
VCAN-204ENST00000502527 TGFB3P10600 412 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 ADCY8P40145 1251 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 CETN2P41208 172 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 ZNF132P52740 706 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 AUHQ13825 339 aaKnown RBP17.6■□□□□ 0.41
VCAN-204ENST00000502527 PRKG1Q13976 671 aa17.6■□□□□ 0.41
VCAN-204ENST00000502527 TNFAIP8L3Q5GJ75 292 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms