RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CORO1BQ9BR76 489 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 BCO2Q9BYV7 579 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 PCDHB8Q9UN66 801 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 MYH11P35749 1972 aa25.35■■□□□ 1.65
COL27A1-208ENST00000494780 H3BQV1 296 aa25.34■■□□□ 1.65
COL27A1-208ENST00000494780 SLC26A4O43511 780 aa25.34■■□□□ 1.65
COL27A1-208ENST00000494780 CLTAP09496 248 aa25.34■■□□□ 1.65
COL27A1-208ENST00000494780 GJB2P29033 226 aa25.34■■□□□ 1.65
COL27A1-208ENST00000494780 NCKAP1LP55160 1127 aa25.34■■□□□ 1.65
COL27A1-208ENST00000494780 FOXK2Q01167 660 aa25.34■■□□□ 1.65
COL27A1-208ENST00000494780 UBXN2BQ14CS0 331 aa25.34■■□□□ 1.65
COL27A1-208ENST00000494780 ELSPBP1Q96BH3 223 aa25.34■■□□□ 1.65
COL27A1-208ENST00000494780 TUBGCP4Q9UGJ1 667 aa25.34■■□□□ 1.65
COL27A1-208ENST00000494780 AFF4Q9UHB7 1163 aaKnown RBP25.34■■□□□ 1.65
COL27A1-208ENST00000494780 PDCD11Q14690 1871 aaKnown RBP25.34■■□□□ 1.65
COL27A1-208ENST00000494780 CXCL8P10145 99 aa25.33■■□□□ 1.65
COL27A1-208ENST00000494780 MARCKSP29966 332 aaPredicted RBP25.33■■□□□ 1.65
COL27A1-208ENST00000494780 MATR3P43243 847 aaKnown RBP eCLIP25.33■■□□□ 1.65
COL27A1-208ENST00000494780 MAGEA9P43362 315 aa25.33■■□□□ 1.65
COL27A1-208ENST00000494780 ARSHQ5FYA8 562 aa25.33■■□□□ 1.65
COL27A1-208ENST00000494780 POTEHQ6S545 545 aa25.33■■□□□ 1.65
COL27A1-208ENST00000494780 ELMOD1Q8N336 334 aa25.33■■□□□ 1.65
COL27A1-208ENST00000494780 AK8Q96MA6 479 aa25.33■■□□□ 1.65
COL27A1-208ENST00000494780 PLA2G2FQ9BZM2 168 aa25.33■■□□□ 1.65
COL27A1-208ENST00000494780 LTB4R2Q9NPC1 389 aa25.33■■□□□ 1.65
COL27A1-208ENST00000494780 ODF2LQ9ULJ1 636 aa25.33■■□□□ 1.65
COL27A1-208ENST00000494780 MIA3Q5JRA6 1907 aa25.33■■□□□ 1.65
COL27A1-208ENST00000494780 NPHP3-ACAD11A0A0J9YXS1 232 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 TTC26A0AVF1 554 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 FAM170BA6NMN3 283 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 CYP3A5P20815 502 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 SCP2P22307 547 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 LRPAP1P30533 357 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 CACNB1Q02641 598 aaPredicted RBP25.32■■□□□ 1.64
COL27A1-208ENST00000494780 ADCY1Q08828 1119 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 KYAT1Q16773 422 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 CYP4A22Q5TCH4 519 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 TANGO2Q6ICL3 276 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 IQCEQ6IPM2 695 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 PDZD4Q76G19 769 aaPredicted RBP25.32■■□□□ 1.64
COL27A1-208ENST00000494780 HAUS6Q7Z4H7 955 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 MAML2Q8IZL2 1156 aaPredicted RBP25.32■■□□□ 1.64
COL27A1-208ENST00000494780 BICD1Q96G01 975 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 NELL2Q99435 816 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 HAPLN2Q9GZV7 340 aa25.32■■□□□ 1.64
COL27A1-208ENST00000494780 MTF2Q9Y483 593 aaPredicted RBP25.32■■□□□ 1.64
COL27A1-208ENST00000494780 M0QZQ0 153 aa25.31■■□□□ 1.64
COL27A1-208ENST00000494780 ZBTB6Q15916 424 aa25.31■■□□□ 1.64
COL27A1-208ENST00000494780 TPRG1Q6ZUI0 275 aa25.31■■□□□ 1.64
COL27A1-208ENST00000494780 LEMD2Q8NC56 503 aa25.31■■□□□ 1.64
COL27A1-208ENST00000494780 DNASE1L2Q92874 299 aa25.31■■□□□ 1.64
COL27A1-208ENST00000494780 TCEAL4Q96EI5 215 aa25.31■■□□□ 1.64
COL27A1-208ENST00000494780 KIF12Q96FN5 646 aa25.31■■□□□ 1.64
COL27A1-208ENST00000494780 ZNF512Q96ME7 567 aaPredicted RBP25.31■■□□□ 1.64
COL27A1-208ENST00000494780 OXCT2Q9BYC2 517 aaPredicted RBP25.31■■□□□ 1.64
COL27A1-208ENST00000494780 SPATA6Q9NWH7 488 aaPredicted RBP25.31■■□□□ 1.64
COL27A1-208ENST00000494780 UBQLN1Q9UMX0 589 aaKnown RBP25.31■■□□□ 1.64
COL27A1-208ENST00000494780 COL4A3Q01955 1670 aa25.31■■□□□ 1.64
COL27A1-208ENST00000494780 LAMTOR5O43504 91 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 OAZ2O95190 189 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 CPB1P15086 417 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 FCARP24071 287 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 LIG4P49917 911 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 PPP2R3AQ06190 1150 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 SPAG1Q07617 926 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 ZNF528Q3MIS6 628 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 ZBTB41Q5SVQ8 909 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 CALML4Q96GE6 196 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 TSPAN18Q96SJ8 248 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 ZFP14Q9HCL3 533 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 FBXO4Q9UKT5 387 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 CACNA1IQ9P0X4 2223 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 VPS13AQ96RL7 3174 aa25.3■■□□□ 1.64
COL27A1-208ENST00000494780 EP300Q09472 2414 aaPredicted RBP25.29■■□□□ 1.64
COL27A1-208ENST00000494780 FANCMQ8IYD8 2048 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 NCAM2O15394 837 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 XPOTO43592 962 aaKnown RBP25.29■■□□□ 1.64
COL27A1-208ENST00000494780 CD72P21854 359 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 CCR2P41597 374 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 ID4P47928 161 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 AARSP49588 968 aaKnown RBP eCLIP25.29■■□□□ 1.64
COL27A1-208ENST00000494780 YWHAHQ04917 246 aaPredicted RBP25.29■■□□□ 1.64
COL27A1-208ENST00000494780 TWF1Q12792 350 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 FAM78AQ5JUQ0 283 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 ZNF852Q6ZMS4 543 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 RNF19BQ6ZMZ0 732 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 GPBP1Q86WP2 473 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 CLDN23Q96B33 292 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 BORCS6Q96GS4 357 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 REEP2Q9BRK0 252 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 CEP72Q9P209 647 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 TBX20Q9UMR3 447 aa25.29■■□□□ 1.64
COL27A1-208ENST00000494780 MRPS17Q9Y2R5 130 aaKnown RBP25.29■■□□□ 1.64
COL27A1-208ENST00000494780 PIGRP01833 764 aa25.28■■□□□ 1.64
COL27A1-208ENST00000494780 UBA7P41226 1012 aa25.28■■□□□ 1.64
COL27A1-208ENST00000494780 TNFSF9P41273 254 aa25.28■■□□□ 1.64
COL27A1-208ENST00000494780 MCM2P49736 904 aa25.28■■□□□ 1.64
COL27A1-208ENST00000494780 EPHA5P54756 1037 aa25.28■■□□□ 1.64
COL27A1-208ENST00000494780 BEST2Q8NFU1 509 aa25.28■■□□□ 1.64
COL27A1-208ENST00000494780 ASB16Q96NS5 453 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms