RNA–Protein interactions for RNA: ENST00000463584.1

PFDN6-206, Transcript of prefoldin subunit 6, humanhuman

TSL 3 BASIC

Gene PFDN6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-206ENST00000463584 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.15■□□□□ 0.82
PFDN6-206ENST00000463584 SFI1A8K8P3 1242 aa20.15■□□□□ 0.82
PFDN6-206ENST00000463584 PROZP22891 400 aa20.15■□□□□ 0.82
PFDN6-206ENST00000463584 PABPC1LQ4VXU2 614 aaKnown RBP20.15■□□□□ 0.82
PFDN6-206ENST00000463584 RTL10Q7L3V2 364 aa20.15■□□□□ 0.82
PFDN6-206ENST00000463584 CDK5RAP3Q96JB5 506 aa20.15■□□□□ 0.82
PFDN6-206ENST00000463584 HCFC1R1Q9NWW0 138 aa20.15■□□□□ 0.82
PFDN6-206ENST00000463584 PTPRZ1P23471 2315 aaPredicted RBP20.14■□□□□ 0.82
PFDN6-206ENST00000463584 H3BQV1 296 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 DDIT3P35638 169 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 SMTNP53814 917 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 ITFG1Q8TB96 612 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 SNX21Q969T3 373 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 ZMAT2Q96NC0 199 aaKnown RBP20.14■□□□□ 0.81
PFDN6-206ENST00000463584 CNTN3Q9P232 1028 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 NUB1Q9Y5A7 615 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 PDCD11Q14690 1871 aaKnown RBP20.14■□□□□ 0.81
PFDN6-206ENST00000463584 FAM186AA6NE01 2351 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 VWA3AA6NCI4 1184 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 PLS3P13797 630 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 KCNE1P15382 129 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 NOLC1Q14978 699 aaKnown RBP eCLIP20.14■□□□□ 0.81
PFDN6-206ENST00000463584 SPECC1Q5M775 1068 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 VARS2Q5ST30 1063 aaKnown RBP20.14■□□□□ 0.81
PFDN6-206ENST00000463584 PHLDB3Q6NSJ2 640 aa20.14■□□□□ 0.81
PFDN6-206ENST00000463584 RPP25Q9BUL9 199 aaKnown RBP20.14■□□□□ 0.81
PFDN6-206ENST00000463584 ABLIM1O14639 778 aa20.13■□□□□ 0.81
PFDN6-206ENST00000463584 TOM1L1O75674 476 aa20.13■□□□□ 0.81
PFDN6-206ENST00000463584 ROR1Q01973 937 aa20.13■□□□□ 0.81
PFDN6-206ENST00000463584 HYIQ5T013 277 aa20.13■□□□□ 0.81
PFDN6-206ENST00000463584 SLC8B1Q6J4K2 584 aa20.13■□□□□ 0.81
PFDN6-206ENST00000463584 KCTD17Q8N5Z5 321 aa20.13■□□□□ 0.81
PFDN6-206ENST00000463584 SPIRE2Q8WWL2 714 aa20.13■□□□□ 0.81
PFDN6-206ENST00000463584 PLIN2Q99541 437 aa20.13■□□□□ 0.81
PFDN6-206ENST00000463584 DNMT3BQ9UBC3 853 aaKnown RBP20.13■□□□□ 0.81
PFDN6-206ENST00000463584 KCNH3Q9ULD8 1083 aa20.13■□□□□ 0.81
PFDN6-206ENST00000463584 SIT1Q9Y3P8 196 aa20.13■□□□□ 0.81
PFDN6-206ENST00000463584 SYN3O14994 580 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 RPL9P32969 192 aaKnown RBP20.12■□□□□ 0.81
PFDN6-206ENST00000463584 GPC5P78333 572 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 NPAS3Q8IXF0 933 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 SYT2Q8N9I0 419 aaPredicted RBP20.12■□□□□ 0.81
PFDN6-206ENST00000463584 ZNF461Q8TAF7 563 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 ING5Q8WYH8 240 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 C18orf25Q96B23 403 aaPredicted RBP20.12■□□□□ 0.81
PFDN6-206ENST00000463584 SHDQ96IW2 340 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 PNMA5Q96PV4 448 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 NTPCRQ9BSD7 190 aaKnown RBP20.12■□□□□ 0.81
PFDN6-206ENST00000463584 KCND2Q9NZV8 630 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 MRPS23Q9Y3D9 190 aaKnown RBP20.12■□□□□ 0.81
PFDN6-206ENST00000463584 NOTCH4Q99466 2003 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 PRRG1O14668 218 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 LRG1P02750 347 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 GJB2P29033 226 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 ELF1P32519 619 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 CT47A1Q5JQC4 288 aaPredicted RBP20.12■□□□□ 0.81
PFDN6-206ENST00000463584 TMEM161BQ8NDZ6 487 aa20.12■□□□□ 0.81
PFDN6-206ENST00000463584 ZBTB45Q96K62 511 aaPredicted RBP20.12■□□□□ 0.81
PFDN6-206ENST00000463584 H7C4K7 107 aa20.11■□□□□ 0.81
PFDN6-206ENST00000463584 DCNP07585 359 aaKnown RBP20.11■□□□□ 0.81
PFDN6-206ENST00000463584 MAPTP10636 758 aaKnown RBP20.11■□□□□ 0.81
PFDN6-206ENST00000463584 MATR3P43243 847 aaKnown RBP eCLIP20.11■□□□□ 0.81
PFDN6-206ENST00000463584 ARPP19P56211 112 aa20.11■□□□□ 0.81
PFDN6-206ENST00000463584 ZPBP2Q6X784 338 aa20.11■□□□□ 0.81
PFDN6-206ENST00000463584 KXD1Q9BQD3 176 aa20.11■□□□□ 0.81
PFDN6-206ENST00000463584 WDR27A2RRH5 827 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 RHOP08100 348 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 PLA2G4BP0C869 781 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 SLC12A3P55017 1021 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 CUL4AQ13619 759 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 KLHL40Q2TBA0 621 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 SEZ6Q53EL9 994 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 ARL6IP4Q66PJ3 421 aaKnown RBP20.1■□□□□ 0.81
PFDN6-206ENST00000463584 PJA1Q8NG27 643 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 BICD1Q96G01 975 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 FOXQ1Q9C009 403 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 LARSQ9P2J5 1176 aaKnown RBP20.1■□□□□ 0.81
PFDN6-206ENST00000463584 MORC2Q9Y6X9 1032 aaPredicted RBP20.1■□□□□ 0.81
PFDN6-206ENST00000463584 MIA3Q5JRA6 1907 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 CLDN3O15551 220 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 SYCP1Q15431 976 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 ICE2Q659A1 982 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 TSC1Q92574 1164 aa20.1■□□□□ 0.81
PFDN6-206ENST00000463584 SPTBN4Q9H254 2564 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 ARHGEF37A1IGU5 675 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 H0YCG3 227 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 MEFVO15553 781 aaPredicted RBP20.09■□□□□ 0.81
PFDN6-206ENST00000463584 ABLIM3O94929 683 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 ATF2P15336 505 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 PFKPQ01813 784 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 CACNB1Q02641 598 aaPredicted RBP20.09■□□□□ 0.81
PFDN6-206ENST00000463584 SNW1Q13573 536 aaKnown RBP20.09■□□□□ 0.81
PFDN6-206ENST00000463584 SLC10A6Q3KNW5 377 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 CTXN3Q4LDR2 81 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 TMEM119Q4V9L6 283 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 ZNF280DQ6N043 979 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 SUSD3Q96L08 255 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 CYP4F11Q9HBI6 524 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 TUBGCP4Q9UGJ1 667 aa20.09■□□□□ 0.81
PFDN6-206ENST00000463584 FBXL5Q9UKA1 691 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms