RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 SLC38A7Q9NVC3 462 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 CNTN3Q9P232 1028 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 MTRRQ9UBK8 725 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 CDV3Q9UKY7 258 aaKnown RBP14.8□□□□□ -0.04
SCAF11-203ENST00000395453 ODF2LQ9ULJ1 636 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 CFAP47Q6ZTR5 3102 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 DOCK6Q96HP0 2047 aa14.8□□□□□ -0.04
SCAF11-203ENST00000395453 ZFHX4Q86UP3 3567 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 NPHP3-ACAD11A0A0J9YXS1 232 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 TRAPPC3O43617 180 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 HNRNPA1P09651 372 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCAF11-203ENST00000395453 LONP1P36776 959 aaKnown RBP14.79□□□□□ -0.04
SCAF11-203ENST00000395453 UBA7P41226 1012 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 NCKAP1LP55160 1127 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 LMNB2Q03252 620 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 GRIN1Q05586 938 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 MCL1Q07820 350 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 STRN3Q13033 797 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 HTR4Q13639 388 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 UVSSAQ2YD98 709 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 SLC10A6Q3KNW5 377 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 ATRIPQ8WXE1 791 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 SPATA6Q9NWH7 488 aaPredicted RBP14.79□□□□□ -0.04
SCAF11-203ENST00000395453 LARSQ9P2J5 1176 aaKnown RBP14.79□□□□□ -0.04
SCAF11-203ENST00000395453 PCDHGA2Q9Y5H1 932 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 ZFP37Q9Y6Q3 630 aaPredicted RBP14.79□□□□□ -0.04
SCAF11-203ENST00000395453 NUMBLQ9Y6R0 609 aa14.79□□□□□ -0.04
SCAF11-203ENST00000395453 MAP1BP46821 2468 aaKnown RBP14.79□□□□□ -0.04
SCAF11-203ENST00000395453 TKTP29401 623 aaKnown RBP14.78□□□□□ -0.04
SCAF11-203ENST00000395453 HOXA9P31269 272 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 RPL9P32969 192 aaKnown RBP14.78□□□□□ -0.04
SCAF11-203ENST00000395453 OR1D2P34982 312 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 PSEN1P49768 467 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 ZNF131P52739 623 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 SF3A1Q15459 793 aaKnown RBP14.78□□□□□ -0.04
SCAF11-203ENST00000395453 ST3GAL2Q16842 350 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 RSPO2Q6UXX9 243 aaPredicted RBP14.78□□□□□ -0.04
SCAF11-203ENST00000395453 RTL10Q7L3V2 364 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 GET4Q7L5D6 327 aaPredicted RBP14.78□□□□□ -0.04
SCAF11-203ENST00000395453 CALML4Q96GE6 196 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 REEP2Q9BRK0 252 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 RTKNQ9BST9 563 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 HAPLN2Q9GZV7 340 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 BACE2Q9Y5Z0 518 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 CHD8Q9HCK8 2581 aa14.78□□□□□ -0.04
SCAF11-203ENST00000395453 KANSL1LA0AUZ9 987 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 H0YCG3 227 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 CLDN3O15551 220 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 TBC1D4O60343 1298 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 LRRN2O75325 713 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 POU2F2P09086 479 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 PDCP20941 246 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 SCP2P22307 547 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 BRCC3P46736 316 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 NOLC1Q14978 699 aaKnown RBP eCLIP14.77□□□□□ -0.04
SCAF11-203ENST00000395453 ANKS3Q6ZW76 656 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 HAUS6Q7Z4H7 955 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 GPBP1Q86WP2 473 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 C18orf25Q96B23 403 aaPredicted RBP14.77□□□□□ -0.04
SCAF11-203ENST00000395453 OSBPL6Q9BZF3 934 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 CCSER1Q9C0I3 900 aa14.77□□□□□ -0.04
SCAF11-203ENST00000395453 PDCD11Q14690 1871 aaKnown RBP14.77□□□□□ -0.05
SCAF11-203ENST00000395453 CHD6Q8TD26 2715 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 I3L4J1 428 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 PODXLO00592 558 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 C8AP07357 584 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 PLCG1P19174 1290 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 DDIT3P35638 169 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 MAGEA9P43362 315 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 GPC5P78333 572 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 PRKCQQ04759 706 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 CSTF1Q05048 431 aaKnown RBP14.76□□□□□ -0.05
SCAF11-203ENST00000395453 SNW1Q13573 536 aaKnown RBP14.76□□□□□ -0.05
SCAF11-203ENST00000395453 MRPL58Q14197 206 aaKnown RBP14.76□□□□□ -0.05
SCAF11-203ENST00000395453 MCM6Q14566 821 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 KARSQ15046 597 aaKnown RBP14.76□□□□□ -0.05
SCAF11-203ENST00000395453 PTPAQ15257 358 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 SEZ6Q53EL9 994 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 PPM1LQ5SGD2 360 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 AXDND1Q5T1B0 1012 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-203ENST00000395453 LIN9Q5TKA1 542 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 SLC8B1Q6J4K2 584 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 ZBTB44Q8NCP5 570 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 RAD54LQ92698 747 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 FIZ1Q96SL8 496 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 BACH2Q9BYV9 841 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 PLEKHA5Q9HAU0 1116 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 ZSCAN32Q9NX65 697 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 SMG5Q9UPR3 1016 aaKnown RBP14.76□□□□□ -0.05
SCAF11-203ENST00000395453 CLIC4Q9Y696 253 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 CDY1Q9Y6F8 540 aa14.76□□□□□ -0.05
SCAF11-203ENST00000395453 MIA3Q5JRA6 1907 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 NOTCH4Q99466 2003 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 TTC26A0AVF1 554 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 VPS37CA5D8V6 355 aaPredicted RBP14.75□□□□□ -0.05
SCAF11-203ENST00000395453 SYN3O14994 580 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 FAM189A1O60320 539 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 ABLIM3O94929 683 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 PIGRP01833 764 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 ADRB2P07550 413 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms