RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 GJA8P48165 433 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 SNRNP35Q16560 246 aaKnown RBP13.79□□□□□ -0.2
C9orf3-201ENST00000277198 MAP3K21Q5TCX8 1036 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 TTC27Q6P3X3 843 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 KCNV1Q6PIU1 500 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 TAOK1Q7L7X3 1001 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 CCDC105Q8IYK2 499 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 PPM1KQ8N3J5 372 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 ANKS4BQ8N8V4 417 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 SHCBP1Q8NEM2 672 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 PLEKHO2Q8TD55 490 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 HELQQ8TDG4 1101 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 PARD3BQ8TEW8 1205 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 SPIRE2Q8WWL2 714 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 NT5C1BQ96P26 610 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 ZNF317Q96PQ6 595 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-201ENST00000277198 NTPCRQ9BSD7 190 aaKnown RBP13.79□□□□□ -0.2
C9orf3-201ENST00000277198 NUP85Q9BW27 656 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.79□□□□□ -0.2
C9orf3-201ENST00000277198 SLC38A10Q9HBR0 1119 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 WHRNQ9P202 907 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 TBX20Q9UMR3 447 aa13.79□□□□□ -0.2
C9orf3-201ENST00000277198 FSCN2O14926 492 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 CYP26A1O43174 497 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 RIPK2O43353 540 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 RASSF9O75901 435 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 ECEL1O95672 775 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 SHBGP04278 402 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 COPB2P35606 906 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 SLC1A1P43005 524 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 PEX3P56589 373 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 KRT76Q01546 638 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 CALCOCO2Q13137 446 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 ITIH4Q14624 930 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 ACAD10Q6JQN1 1059 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 XRRA1Q6P2D8 792 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 ZDHHC14Q8IZN3 488 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 FBXL13Q8NEE6 735 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 TRPV1Q8NER1 839 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 MFSD14AQ96MC6 490 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 TEX13BQ9BXU2 312 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 HOMER2Q9NSB8 354 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 VGLL3A8MV65 326 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 WDR64B1ANS9 1081 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 TISP43B9A030 160 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 HOXC6P09630 235 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 MYBL1P10243 752 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 MARCKSL1P49006 195 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 GCNT1Q02742 428 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 SIX1Q15475 284 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-201ENST00000277198 QPCTQ16769 361 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 ZNF568Q3ZCX4 644 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 MAEAQ7L5Y9 396 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 DPP9Q86TI2 863 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 SLC47A2Q86VL8 602 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 ZNF677Q86XU0 584 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 CCDC50Q8IVM0 306 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 TMEM161BQ8NDZ6 487 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 ZNF653Q96CK0 615 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 TRIM11Q96F44 468 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 AGBL1Q96MI9 1066 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 MMP19Q99542 508 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 OSBPL7Q9BZF2 842 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 SEMA4AQ9H3S1 761 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 MROH8Q9H579 483 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 AVENQ9NQS1 362 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-201ENST00000277198 RAB20Q9NX57 234 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 COL20A1Q9P218 1284 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 KCNG1Q9UIX4 513 aa13.78□□□□□ -0.2
C9orf3-201ENST00000277198 TMEM110-MUSTN1A8MSY1 372 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 RASGRF2O14827 1237 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 SLC16A4O15374 487 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 DKC1O60832 514 aaKnown RBP eCLIP13.77□□□□□ -0.21
C9orf3-201ENST00000277198 IGHA2P01877 340 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 ADRB2P07550 413 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 MMEP08473 750 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 RARAP10276 462 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 CHN1P15882 459 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 ITIH2P19823 946 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 CNGA1P29973 690 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 ATP5DP30049 168 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 ADSSP30520 456 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 MRPS9P82933 396 aaKnown RBP13.77□□□□□ -0.21
C9orf3-201ENST00000277198 CAV1Q03135 178 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 DMP1Q13316 513 aaPredicted RBP13.77□□□□□ -0.21
C9orf3-201ENST00000277198 ANKRD20A8PQ5CZ79 823 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 PRAMEF19Q5SWL8 479 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 ZNF746Q6NUN9 644 aaPredicted RBP13.77□□□□□ -0.21
C9orf3-201ENST00000277198 AADACL2Q6P093 401 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 CCDC197Q8NCU1 140 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 SYTL5Q8TDW5 730 aaPredicted RBP13.77□□□□□ -0.21
C9orf3-201ENST00000277198 DIS3LQ8TF46 1054 aaKnown RBP13.77□□□□□ -0.21
C9orf3-201ENST00000277198 ATXN2LQ8WWM7 1075 aaKnown RBP13.77□□□□□ -0.21
C9orf3-201ENST00000277198 DDX1Q92499 740 aaKnown RBP13.77□□□□□ -0.21
C9orf3-201ENST00000277198 DHX38Q92620 1227 aaKnown RBP13.77□□□□□ -0.21
C9orf3-201ENST00000277198 ADAM7Q9H2U9 754 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 HOMER3Q9NSC5 361 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 TCEAL9Q9UHQ7 104 aa13.77□□□□□ -0.21
C9orf3-201ENST00000277198 NFIBO00712 420 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 MAFGO15525 162 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms