RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 ZACNQ401N2 412 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 RUFY4Q6ZNE9 571 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 TSHZ1Q6ZSZ6 1077 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 CBWD2Q8IUF1 395 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 PRPF31Q8WWY3 499 aaKnown RBP11.46□□□□□ -0.57
CDCA3-201ENST00000229265 CTNNBL1Q8WYA6 563 aaPredicted RBP11.46□□□□□ -0.57
CDCA3-201ENST00000229265 VCPIP1Q96JH7 1222 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 OSBPL9Q96SU4 736 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 PARD6BQ9BYG5 372 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 RNPEPQ9H4A4 650 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 FAM53CQ9NYF3 392 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 TRIM10Q9UDY6 481 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 GTF2IRD1Q9UHL9 959 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 LCMT1Q9UIC8 334 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 TTC7AQ9ULT0 858 aaPredicted RBP11.46□□□□□ -0.57
CDCA3-201ENST00000229265 CNTN6Q9UQ52 1028 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 STXBP5LQ9Y2K9 1186 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 MICAL3Q7RTP6 2002 aa11.46□□□□□ -0.57
CDCA3-201ENST00000229265 LRRIQ4A6NIV6 560 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 OGTO15294 1046 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 MOCS3O95396 460 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 LGALS2P05162 132 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 GPC5P78333 572 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 ADAM17P78536 824 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 ARID5AQ03989 594 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 MCL1Q07820 350 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 LAMTOR4Q0VGL1 99 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 RPS6KA1Q15418 735 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 PTGISQ16647 500 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 MAP9Q49MG5 647 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 ZNF618Q5T7W0 954 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 NFRKBQ6P4R8 1299 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 SESTD1Q86VW0 696 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 WDR49Q8IV35 697 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 HELQQ8TDG4 1101 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 RFFLQ8WZ73 363 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 TMEM143Q96AN5 459 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 RPS6KC1Q96S38 1066 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 TSPAN18Q96SJ8 248 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 ACO2Q99798 780 aaKnown RBP11.45□□□□□ -0.58
CDCA3-201ENST00000229265 SH2D3AQ9BRG2 576 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 FAM213AQ9BRX8 229 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 TLR10Q9BXR5 811 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 CCDC113Q9H0I3 377 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 PRDM12Q9H4Q4 367 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 CERS4Q9HA82 394 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 ABCB6Q9NP58 842 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 PRMT7Q9NVM4 692 aaPredicted RBP11.45□□□□□ -0.58
CDCA3-201ENST00000229265 PCDHB2Q9Y5E7 798 aa11.45□□□□□ -0.58
CDCA3-201ENST00000229265 MROH7Q68CQ1 1323 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 ADGRA3Q8IWK6 1321 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 MIF4GDA9UHW6 222 aaKnown RBP11.44□□□□□ -0.58
CDCA3-201ENST00000229265 ZRANB2O95218 330 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDCA3-201ENST00000229265 IL18RAPO95256 599 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 CKBP12277 381 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 PROZP22891 400 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 GALCP54803 685 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 PTENP60484 403 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 PPIGQ13427 754 aaKnown RBP eCLIP11.44□□□□□ -0.581e-6■■■■□ 25.5
CDCA3-201ENST00000229265 CAPSQ13938 189 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 DUOXA2Q1HG44 320 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 SGSM1Q2NKQ1 1148 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 MARCH8Q5T0T0 291 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 CCDC181Q5TID7 509 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 CRELD2Q6UXH1 353 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-201ENST00000229265 TRIM72Q6ZMU5 477 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDCA3-201ENST00000229265 APBB1IPQ7Z5R6 666 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-201ENST00000229265 NT5DC4Q86YG4 428 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 CD302Q8IX05 232 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 PLEKHO2Q8TD55 490 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 ACTRT1Q8TDG2 376 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 ASAP3Q8TDY4 903 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 TRAPPC12Q8WVT3 735 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 TRIM11Q96F44 468 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 NAP1L3Q99457 506 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-201ENST00000229265 CGRRF1Q99675 332 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 MSTO1Q9BUK6 570 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 IKZF4Q9H2S9 585 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 PTPRHQ9HD43 1115 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 SETD4Q9NVD3 440 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 UVRAGQ9P2Y5 699 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 TNFSF13BQ9Y275 285 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 CAPN6Q9Y6Q1 641 aa11.44□□□□□ -0.58
CDCA3-201ENST00000229265 NCANO14594 1321 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 ENC1O14682 589 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 TLR3O15455 904 aaKnown RBP11.43□□□□□ -0.58
CDCA3-201ENST00000229265 PALMO75781 387 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 FGBP02675 491 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 ADRB2P07550 413 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 SMIM10L2AP0DMW4 78 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 SMIM10L2BP0DMW5 78 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 MYBL1P10243 752 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 TNNI1P19237 187 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 PHKA2P46019 1235 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 NOP2P46087 812 aaKnown RBP11.43□□□□□ -0.58
CDCA3-201ENST00000229265 CDR2Q01850 454 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 GPS2Q13227 327 aa11.43□□□□□ -0.58
CDCA3-201ENST00000229265 NAA30Q147X3 362 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms