RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 IPP1P00817 287 aaKnown RBP-0.7□□□□□ -2.52
snR55snR55 GCD2P12754 651 aaPredicted RBP-0.7□□□□□ -2.52
snR55snR55 FMP33P46998 180 aa-0.7□□□□□ -2.52
snR55snR55 YJR012CP47087 207 aa-0.7□□□□□ -2.52
snR55snR55 SPO19Q03029 223 aa-0.7□□□□□ -2.52
snR55snR55 SPG4Q04438 115 aa-0.7□□□□□ -2.52
snR55snR55 YOR029WQ12243 111 aa-0.7□□□□□ -2.52
snR55snR55 SIR2P06700 562 aa-0.71□□□□□ -2.52
snR55snR55 RPS5P26783 225 aaKnown RBP-0.71□□□□□ -2.52
snR55snR55 YBR096WP38256 230 aa-0.71□□□□□ -2.52
snR55snR55 YBR209WP38311 105 aa-0.71□□□□□ -2.52
snR55snR55 GOS1P38736 223 aa-0.71□□□□□ -2.52
snR55snR55 YEL008WP40001 126 aa-0.71□□□□□ -2.52
snR55snR55 HYR1P40581 163 aaKnown RBP-0.71□□□□□ -2.52
snR55snR55 YFH7P43591 353 aa-0.71□□□□□ -2.52
snR55snR55 GCD14P46959 383 aaPredicted RBP-0.71□□□□□ -2.52
snR55snR55 GLG2P47011 380 aa-0.71□□□□□ -2.52
snR55snR55 ALG11P53954 548 aaKnown RBP-0.71□□□□□ -2.52
snR55snR55 YPL229WQ99395 206 aa-0.71□□□□□ -2.52
snR55snR55 MET16P18408 261 aaPredicted RBP-0.72□□□□□ -2.52
snR55snR55 VPS3P23643 1011 aa-0.72□□□□□ -2.52
snR55snR55 YBR063CP38083 404 aa-0.72□□□□□ -2.52
snR55snR55 VMA22P38784 181 aa-0.72□□□□□ -2.52
snR55snR55 DDI1P40087 428 aa-0.72□□□□□ -2.52
snR55snR55 COA1P40452 197 aa-0.72□□□□□ -2.52
snR55snR55 HAM1P47119 197 aaKnown RBP-0.72□□□□□ -2.52
snR55snR55 SNZ2P53824 298 aa-0.72□□□□□ -2.52
snR55snR55 YLR460CP54007 376 aa-0.72□□□□□ -2.52
snR55snR55 REP2P03872 296 aa-0.73□□□□□ -2.53
snR55snR55 PRX1P34227 261 aaKnown RBP-0.73□□□□□ -2.53
snR55snR55 MRPL39P36533 70 aa-0.73□□□□□ -2.53
snR55snR55 KAP114P53067 1004 aa-0.73□□□□□ -2.53
snR55snR55 MRPS28P21771 286 aa-0.74□□□□□ -2.53
snR55snR55 MEK1P24719 497 aaPredicted RBP-0.74□□□□□ -2.53
snR55snR55 MRPL40P36534 297 aa-0.74□□□□□ -2.53
snR55snR55 UMP1P38293 148 aa-0.74□□□□□ -2.53
snR55snR55 SMB1P40018 196 aaKnown RBP-0.74□□□□□ -2.53
snR55snR55 MGR3Q04472 501 aa-0.74□□□□□ -2.53
snR55snR55 ERV41Q04651 352 aa-0.74□□□□□ -2.53
snR55snR55 FSF1Q12029 327 aaKnown RBP-0.74□□□□□ -2.53
snR55snR55 YLR236CA0A023PZG4 107 aa-0.75□□□□□ -2.53
snR55snR55 SEC11P15367 167 aa-0.75□□□□□ -2.53
snR55snR55 ERD2P18414 219 aa-0.75□□□□□ -2.53
snR55snR55 CAT5P41735 233 aa-0.75□□□□□ -2.53
snR55snR55 MRX5P47007 382 aa-0.75□□□□□ -2.53
snR55snR55 PNC1P53184 216 aaKnown RBP-0.75□□□□□ -2.53
snR55snR55 OST6Q03723 332 aa-0.75□□□□□ -2.53
snR55snR55 YHR007C-AQ07074 71 aa-0.75□□□□□ -2.53
snR55snR55 COA3Q3E7B2 85 aa-0.75□□□□□ -2.53
snR55snR55 ATG40Q99325 256 aa-0.75□□□□□ -2.53
snR55snR55 TUS1Q06412 1307 aa-0.75□□□□□ -2.53
snR55snR55 YNL010WP53981 241 aaKnown RBP-0.76□□□□□ -2.53
snR55snR55 YPR098CQ06089 161 aa-0.76□□□□□ -2.53
snR55snR55 HIS1P00498 297 aaKnown RBP-0.78□□□□□ -2.53
snR55snR55 CDC36P06100 191 aaPredicted RBP-0.78□□□□□ -2.53
snR55snR55 HOM6P31116 359 aaKnown RBP-0.78□□□□□ -2.53
snR55snR55 SGE1P33335 543 aa-0.78□□□□□ -2.53
snR55snR55 YPR203WQ08994 102 aa-0.78□□□□□ -2.53
snR55snR55 CCW12Q12127 133 aa-0.78□□□□□ -2.53
snR55snR55 FMP16Q12497 93 aa-0.78□□□□□ -2.53
snR55snR55 MDM35O60200 86 aa-0.79□□□□□ -2.54
snR55snR55 YPR170W-BP0C5R9 85 aa-0.79□□□□□ -2.54
snR55snR55 MRPL15P36523 253 aa-0.79□□□□□ -2.54
snR55snR55 MRPL17P36528 281 aa-0.79□□□□□ -2.54
snR55snR55 PRS2P38620 318 aaKnown RBP-0.79□□□□□ -2.54
snR55snR55 URA8P38627 578 aaPredicted RBP-0.79□□□□□ -2.54
snR55snR55 IRC22P40006 225 aa-0.79□□□□□ -2.54
snR55snR55 OSW5P40219 148 aa-0.79□□□□□ -2.54
snR55snR55 EAF6P47128 113 aa-0.79□□□□□ -2.54
snR55snR55 YDR391CQ04170 232 aa-0.79□□□□□ -2.54
snR55snR55 SSQ1Q05931 657 aaPredicted RBP-0.79□□□□□ -2.54
snR55snR55 GMC2Q06201 188 aa-0.79□□□□□ -2.54
snR55snR55 RAD28Q12021 506 aa-0.79□□□□□ -2.54
snR55snR55 YRA1Q12159 226 aaKnown RBP-0.79□□□□□ -2.54
snR55snR55 DBF2P22204 572 aa-0.8□□□□□ -2.54
snR55snR55 SNC2P33328 115 aa-0.8□□□□□ -2.54
snR55snR55 SHE2P36068 246 aaKnown RBP RIP-Chip data-0.8□□□□□ -2.54not detected
snR55snR55 ABF2Q02486 183 aa-0.8□□□□□ -2.54
snR55snR55 YML096WQ04489 525 aa-0.8□□□□□ -2.54
snR55snR55 PRM3Q08931 133 aa-0.8□□□□□ -2.54
snR55snR55 YHL037CP38733 133 aa-0.81□□□□□ -2.54
snR55snR55 PRE6P40303 254 aaKnown RBP-0.81□□□□□ -2.54
snR55snR55 YIL102CP40488 101 aa-0.81□□□□□ -2.54
snR55snR55 SWP1Q02795 286 aa-0.81□□□□□ -2.54
snR55snR55 CUE4Q04201 117 aaPredicted RBP-0.81□□□□□ -2.54
snR55snR55 YDR286CQ05530 114 aa-0.81□□□□□ -2.54
snR55snR55 SEI1Q06058 285 aa-0.81□□□□□ -2.54
snR55snR55 GPM2Q12008 311 aa-0.81□□□□□ -2.54
snR55snR55 YLR156WP0CE96 114 aa-0.82□□□□□ -2.54
snR55snR55 YLR159WP0CE97 114 aa-0.82□□□□□ -2.54
snR55snR55 YLR161WP0CE98 114 aa-0.82□□□□□ -2.54
snR55snR55 RPT5P33297 434 aaKnown RBP-0.82□□□□□ -2.54
snR55snR55 ILM1P47155 203 aa-0.82□□□□□ -2.54
snR55snR55 YDR248CQ03786 193 aa-0.82□□□□□ -2.54
snR55snR55 PGC1Q08959 321 aa-0.82□□□□□ -2.54
snR55snR55 CDC10P25342 322 aaKnown RBP-0.83□□□□□ -2.54
snR55snR55 RIB1P38066 345 aa-0.83□□□□□ -2.54
snR55snR55 HPA3P39979 161 aa-0.83□□□□□ -2.54
snR55snR55 YER034WP40022 185 aaKnown RBP-0.83□□□□□ -2.54
snR55snR55 SSK22P25390 1331 aaPredicted RBP-0.84□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 63.8 ms