RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeast

Gene YOP1, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOP1	YPR028W	RPL24B	P24000	155 aa	Known RBP	0.94	□□□□□ -2.26
YOP1	YPR028W	OAC1	P32332	324 aa		0.94	□□□□□ -2.26
YOP1	YPR028W	SSO1	P32867	290 aa		0.94	□□□□□ -2.26
YOP1	YPR028W	ECM33	P38248	429 aa	Known RBP	0.94	□□□□□ -2.26
YOP1	YPR028W	PHO88	P38264	188 aa	Predicted RBP	0.94	□□□□□ -2.26
YOP1	YPR028W	ERV15	P38312	142 aa		0.94	□□□□□ -2.26
YOP1	YPR028W	VTC1	P40046	129 aa	RIP-Chip data	0.94	□□□□□ -2.26	not detected
YOP1	YPR028W	PEX17	P40155	199 aa		0.94	□□□□□ -2.26
YOP1	YPR028W	PEP8	P40335	379 aa		0.94	□□□□□ -2.26
YOP1	YPR028W	ERV29	P53337	310 aa		0.94	□□□□□ -2.26
YOP1	YPR028W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.94	□□□□□ -2.26	not detected
YOP1	YPR028W	ARR2	Q06597	130 aa		0.94	□□□□□ -2.26
YOP1	YPR028W	HEM25	Q07534	307 aa		0.94	□□□□□ -2.26
YOP1	YPR028W	USB1	Q12208	290 aa	Known RBP	0.94	□□□□□ -2.26
YOP1	YPR028W	LSO2	Q3E772	92 aa	Known RBP	0.94	□□□□□ -2.26
YOP1	YPR028W	CDC8	P00572	216 aa		0.93	□□□□□ -2.26
YOP1	YPR028W	VMA6	P32366	345 aa	Known RBP	0.93	□□□□□ -2.26
YOP1	YPR028W	BMH2	P34730	273 aa	Known RBP	0.93	□□□□□ -2.26
YOP1	YPR028W	YHR022C	P38763	256 aa		0.93	□□□□□ -2.26
YOP1	YPR028W	BMT5	P40493	336 aa		0.93	□□□□□ -2.26
YOP1	YPR028W	YKE4	P40544	346 aa		0.93	□□□□□ -2.26
YOP1	YPR028W	YFR054C	P43622	192 aa		0.93	□□□□□ -2.26
YOP1	YPR028W	MIC26	P50087	233 aa		0.93	□□□□□ -2.26
YOP1	YPR028W	TOS8	P53147	276 aa		0.93	□□□□□ -2.26
YOP1	YPR028W	FYV6	P53913	173 aa		0.93	□□□□□ -2.26
YOP1	YPR028W	CDC123	Q05791	360 aa		0.93	□□□□□ -2.26
YOP1	YPR028W	YHR139C-A	O13536	103 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	THP2	O13539	261 aa	Known RBP	0.92	□□□□□ -2.26
YOP1	YPR028W	RAS2	P01120	322 aa	Known RBP	0.92	□□□□□ -2.26
YOP1	YPR028W	RHO1	P06780	209 aa	Known RBP	0.92	□□□□□ -2.26
YOP1	YPR028W	YPR170W-B	P0C5R9	85 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	URA6	P15700	204 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	MDH2	P22133	377 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	PPA2	P28239	310 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	TCD1	P38756	429 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	DOG2	P38773	246 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	DSE2	P38844	325 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	YHR180W	P38868	163 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	LSM4	P40070	187 aa	Known RBP	0.92	□□□□□ -2.26
YOP1	YPR028W	PRM8	P53174	237 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	YNL010W	P53981	241 aa	Known RBP	0.92	□□□□□ -2.26
YOP1	YPR028W	CYT2	Q00873	224 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	PSF1	Q12488	208 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	DRS2	P39524	1355 aa		0.92	□□□□□ -2.26
YOP1	YPR028W	CDC7	P06243	507 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	PET9	P18239	318 aa	Known RBP	0.91	□□□□□ -2.26
YOP1	YPR028W	YMR31	P19955	123 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	ATG22	P25568	528 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	MEI4	P29467	408 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	SVP26	P38869	228 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	IRC22	P40006	225 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	RTR1	P40084	226 aa	Predicted RBP	0.91	□□□□□ -2.26
YOP1	YPR028W	ICE2	P40499	491 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	RPL33B	P41056	107 aa	Known RBP	0.91	□□□□□ -2.26
YOP1	YPR028W	YRB1	P41920	201 aa	Known RBP	0.91	□□□□□ -2.26
YOP1	YPR028W	PRM10	P42946	383 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	OTU1	P43558	301 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	BRR6	P53062	197 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	YNR062C	P53748	327 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	LPP1	Q04396	274 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	RUD3	Q12234	484 aa	Known RBP	0.91	□□□□□ -2.26
YOP1	YPR028W	DCN1	Q12395	269 aa		0.91	□□□□□ -2.26
YOP1	YPR028W	CDC28	P00546	298 aa	Known RBP	0.9	□□□□□ -2.27
YOP1	YPR028W	RPL28	P02406	149 aa	Known RBP	0.9	□□□□□ -2.27
YOP1	YPR028W	REP2	P03872	296 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	YBR121C-A	P0C5L4	52 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	DDI2	P0CH63	225 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	DDI3	P0CH64	225 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	NHP6B	P11633	99 aa	Known RBP	0.9	□□□□□ -2.27
YOP1	YPR028W	MRPS28	P21771	286 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	SRY1	P36007	326 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	POP4	P38336	279 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	MIC12	P38341	106 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	URA8	P38627	578 aa	Predicted RBP	0.9	□□□□□ -2.27
YOP1	YPR028W	PGD1	P40356	397 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	AGE2	P40529	298 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	TIR3	P40552	269 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	GCN20	P43535	752 aa	Known RBP	0.9	□□□□□ -2.27
YOP1	YPR028W	FAR7	P43592	221 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	BXI1	P48558	297 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	NUP57	P48837	541 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	AIF1	P52923	378 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	ALG13	P53178	202 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	BUD25	P85052	153 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	SNZ1	Q03148	297 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	YDR248C	Q03786	193 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	TRM12	Q04235	462 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	NCB2	Q92317	146 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	SEY1	Q99287	776 aa		0.9	□□□□□ -2.27
YOP1	YPR028W	YLR156W	P0CE96	114 aa		0.89	□□□□□ -2.27
YOP1	YPR028W	YLR159W	P0CE97	114 aa		0.89	□□□□□ -2.27
YOP1	YPR028W	YLR161W	P0CE98	114 aa		0.89	□□□□□ -2.27
YOP1	YPR028W	COQ1	P18900	473 aa		0.89	□□□□□ -2.27
YOP1	YPR028W	DBF2	P22204	572 aa		0.89	□□□□□ -2.27
YOP1	YPR028W	PBN1	P25580	416 aa		0.89	□□□□□ -2.27
YOP1	YPR028W	APS1	P35181	156 aa		0.89	□□□□□ -2.27
YOP1	YPR028W	SKG1	P36169	355 aa		0.89	□□□□□ -2.27
YOP1	YPR028W	MRPL28	P36527	147 aa		0.89	□□□□□ -2.27
YOP1	YPR028W	RTC3	P38804	111 aa	Predicted RBP	0.89	□□□□□ -2.27
YOP1	YPR028W	AVT2	P39981	480 aa		0.89	□□□□□ -2.27

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