RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C RPC17P47076 161 aa1.83□□□□□ -2.12
CUP9YPL177C NSA1P53136 463 aaPredicted RBP1.83□□□□□ -2.12
CUP9YPL177C SSQ1Q05931 657 aaPredicted RBP1.83□□□□□ -2.12
CUP9YPL177C NEJ1Q06148 342 aa1.83□□□□□ -2.12
CUP9YPL177C BCY1P07278 416 aaKnown RBP1.82□□□□□ -2.12
CUP9YPL177C OAC1P32332 324 aa1.82□□□□□ -2.12
CUP9YPL177C PHO88P38264 188 aaPredicted RBP1.82□□□□□ -2.12
CUP9YPL177C GCN20P43535 752 aaKnown RBP1.82□□□□□ -2.12
CUP9YPL177C CYT2Q00873 224 aa1.82□□□□□ -2.12
CUP9YPL177C BOL1Q3E793 110 aa1.82□□□□□ -2.12
CUP9YPL177C YPR170W-BP0C5R9 85 aa1.81□□□□□ -2.12
CUP9YPL177C YHR022CP38763 256 aa1.81□□□□□ -2.12
CUP9YPL177C CWC21Q03375 135 aaKnown RBP1.81□□□□□ -2.12
CUP9YPL177C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
CUP9YPL177C TPO4Q12256 659 aa1.81□□□□□ -2.12
CUP9YPL177C SRY1P36007 326 aa1.8□□□□□ -2.12
CUP9YPL177C ERV15P38312 142 aa1.8□□□□□ -2.12
CUP9YPL177C MIC12P38341 106 aa1.8□□□□□ -2.12
CUP9YPL177C ALG13P53178 202 aa1.8□□□□□ -2.12
CUP9YPL177C THP2O13539 261 aaKnown RBP1.79□□□□□ -2.12
CUP9YPL177C CDC8P00572 216 aa1.79□□□□□ -2.12
CUP9YPL177C SPT3P06844 337 aa1.79□□□□□ -2.12
CUP9YPL177C URA6P15700 204 aa1.79□□□□□ -2.12
CUP9YPL177C PEP8P40335 379 aa1.79□□□□□ -2.12
CUP9YPL177C BMT5P40493 336 aa1.79□□□□□ -2.12
CUP9YPL177C YKE4P40544 346 aa1.79□□□□□ -2.12
CUP9YPL177C ABF2Q02486 183 aa1.79□□□□□ -2.12
CUP9YPL177C TRM12Q04235 462 aa1.79□□□□□ -2.12
CUP9YPL177C CDC123Q05791 360 aa1.79□□□□□ -2.12
CUP9YPL177C YMR31P19955 123 aa1.78□□□□□ -2.12
CUP9YPL177C NTG1P31378 399 aa1.78□□□□□ -2.12
CUP9YPL177C VMA6P32366 345 aaKnown RBP1.78□□□□□ -2.12
CUP9YPL177C BMH2P34730 273 aaKnown RBP1.78□□□□□ -2.12
CUP9YPL177C URA8P38627 578 aaPredicted RBP1.78□□□□□ -2.12
CUP9YPL177C TCD1P38756 429 aa1.78□□□□□ -2.12
CUP9YPL177C IRC22P40006 225 aa1.78□□□□□ -2.12
CUP9YPL177C RTR1P40084 226 aaPredicted RBP1.78□□□□□ -2.12
CUP9YPL177C COX15P40086 486 aa1.78□□□□□ -2.12
CUP9YPL177C PRE6P40303 254 aaKnown RBP1.78□□□□□ -2.12
CUP9YPL177C PRM10P42946 383 aa1.78□□□□□ -2.12
CUP9YPL177C OTU1P43558 301 aa1.78□□□□□ -2.12
CUP9YPL177C ERG25P53045 309 aa1.78□□□□□ -2.12
CUP9YPL177C YMD8Q03697 442 aa1.78□□□□□ -2.12
CUP9YPL177C SPG3Q04398 127 aaPredicted RBP1.78□□□□□ -2.12
CUP9YPL177C DRS2P39524 1355 aa1.77□□□□□ -2.13
CUP9YPL177C BEM2P39960 2167 aaKnown RBP1.77□□□□□ -2.13
CUP9YPL177C CDC28P00546 298 aaKnown RBP1.77□□□□□ -2.13
CUP9YPL177C CDC7P06243 507 aa1.77□□□□□ -2.13
CUP9YPL177C DDI2P0CH63 225 aa1.77□□□□□ -2.13
CUP9YPL177C DDI3P0CH64 225 aa1.77□□□□□ -2.13
CUP9YPL177C RPL24BP24000 155 aaKnown RBP1.77□□□□□ -2.13
CUP9YPL177C PPA2P28239 310 aa1.77□□□□□ -2.13
CUP9YPL177C MSS2P40990 351 aa1.77□□□□□ -2.13
CUP9YPL177C YNR062CP53748 327 aa1.77□□□□□ -2.13
CUP9YPL177C FYV6P53913 173 aa1.77□□□□□ -2.13
CUP9YPL177C YNL010WP53981 241 aaKnown RBP1.77□□□□□ -2.13
CUP9YPL177C PSF1Q12488 208 aa1.77□□□□□ -2.13
CUP9YPL177C PET9P18239 318 aaKnown RBP1.76□□□□□ -2.13
CUP9YPL177C RPB4P20433 221 aaPredicted RBP1.76□□□□□ -2.13
CUP9YPL177C DBF2P22204 572 aa1.76□□□□□ -2.13
CUP9YPL177C YKT6P36015 200 aaKnown RBP1.76□□□□□ -2.13
CUP9YPL177C DOG2P38773 246 aa1.76□□□□□ -2.13
CUP9YPL177C RTC3P38804 111 aaPredicted RBP1.76□□□□□ -2.13
CUP9YPL177C MIC26P50087 233 aa1.76□□□□□ -2.13
CUP9YPL177C LPP1Q04396 274 aa1.76□□□□□ -2.13
CUP9YPL177C USB1Q12208 290 aaKnown RBP1.76□□□□□ -2.13
CUP9YPL177C ARG80P07249 177 aa1.75□□□□□ -2.13
CUP9YPL177C PBN1P25580 416 aa1.75□□□□□ -2.13
CUP9YPL177C SSO1P32867 290 aa1.75□□□□□ -2.13
CUP9YPL177C DSE2P38844 325 aa1.75□□□□□ -2.13
CUP9YPL177C AGE2P40529 298 aa1.75□□□□□ -2.13
CUP9YPL177C RPL33BP41056 107 aaKnown RBP1.75□□□□□ -2.13
CUP9YPL177C PGA2P53903 129 aa1.75□□□□□ -2.13
CUP9YPL177C MDH2P22133 377 aa1.74□□□□□ -2.13
CUP9YPL177C VTC1P40046 129 aaRIP-Chip data1.74□□□□□ -2.13not detected
CUP9YPL177C RSM25P40496 264 aa1.74□□□□□ -2.13
CUP9YPL177C BRR6P53062 197 aa1.74□□□□□ -2.13
CUP9YPL177C DID2P69771 204 aa1.74□□□□□ -2.13
CUP9YPL177C ADF1Q2V2Q1 113 aa1.74□□□□□ -2.13
CUP9YPL177C YKL183C-AQ3E765 70 aa1.74□□□□□ -2.13
CUP9YPL177C LSO2Q3E772 92 aaKnown RBP1.74□□□□□ -2.13
CUP9YPL177C JIP3O13555 125 aa1.73□□□□□ -2.13
CUP9YPL177C RPL28P02406 149 aaKnown RBP1.73□□□□□ -2.13
CUP9YPL177C REP2P03872 296 aa1.73□□□□□ -2.13
CUP9YPL177C YLR156WP0CE96 114 aa1.73□□□□□ -2.13
CUP9YPL177C YLR159WP0CE97 114 aa1.73□□□□□ -2.13
CUP9YPL177C YLR161WP0CE98 114 aa1.73□□□□□ -2.13
CUP9YPL177C NHP6BP11633 99 aaKnown RBP1.73□□□□□ -2.13
CUP9YPL177C ATG22P25568 528 aa1.73□□□□□ -2.13
CUP9YPL177C MEI4P29467 408 aa1.73□□□□□ -2.13
CUP9YPL177C ERG28P40030 148 aa1.73□□□□□ -2.13
CUP9YPL177C BXI1P48558 297 aa1.73□□□□□ -2.13
CUP9YPL177C NUP57P48837 541 aa1.73□□□□□ -2.13
CUP9YPL177C AIF1P52923 378 aa1.73□□□□□ -2.13
CUP9YPL177C YML108WQ03759 105 aa1.73□□□□□ -2.13
CUP9YPL177C YDR248CQ03786 193 aa1.73□□□□□ -2.13
CUP9YPL177C DCN1Q12395 269 aa1.73□□□□□ -2.13
CUP9YPL177C GIS3Q12418 502 aa1.73□□□□□ -2.13
CUP9YPL177C TDA8Q6B2U8 126 aa1.73□□□□□ -2.13
CUP9YPL177C SEY1Q99287 776 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 90.5 ms