RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	SMM1	P53720	384 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	ATG4	P53867	494 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	YNL092W	P53934	400 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	RNH201	P53942	307 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	SMX3	P54999	86 aa	Predicted RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	MTQ2	Q03920	221 aa	Predicted RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	CAB5	Q03941	241 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	TY1A-MR1	Q04215	440 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	SDH7	Q04401	133 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	HRI1	Q05905	244 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	YLR456W	Q06199	204 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	LOA1	Q06508	300 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	SUE1	Q06524	206 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	PRP11	Q07350	266 aa	Predicted RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	YOR385W	Q08909	290 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	TGL5	Q12043	749 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	PIN2	Q12057	282 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	YDL157C	Q12082	118 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	WTM2	Q12206	467 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	YDL177C	Q12257	170 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	TPT1	Q12272	230 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	FRE7	Q12333	620 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	SWM1	Q12379	170 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	PAR32	Q12515	295 aa	Known RBP	2.38	□□□□□ -2.03
LCL1	YPL056C	ISD11	Q6Q560	94 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	IZH4	Q99393	312 aa		2.38	□□□□□ -2.03
LCL1	YPL056C	YIH1	P25637	258 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	TIP1	P27654	210 aa	Predicted RBP	2.37	□□□□□ -2.03
LCL1	YPL056C	MRP49	P32388	137 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
LCL1	YPL056C	MTH1	P35198	433 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	YOR062C	P36025	268 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	SHE1	P38200	338 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	UBS1	P38290	277 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	DER1	P38307	211 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	SAF1	P38352	637 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	DOG2	P38773	246 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	DOG1	P38774	246 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	YPT35	P38815	214 aa	Known RBP	2.37	□□□□□ -2.03
LCL1	YPL056C	YHR127W	P38833	243 aa	Known RBP	2.37	□□□□□ -2.03
LCL1	YPL056C	IRC22	P40006	225 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	YER085C	P40058	173 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	COX15	P40086	486 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	RPL13B	P40212	199 aa	Known RBP	2.37	□□□□□ -2.03
LCL1	YPL056C	ATF1	P40353	525 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	FIS1	P40515	155 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	GTS1	P40956	396 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	OYE3	P41816	400 aa	Predicted RBP	2.37	□□□□□ -2.03
LCL1	YPL056C	YCH1	P42937	148 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	PET130	P47065	347 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	STE24	P47154	453 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	LYS5	P50113	272 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	MUP1	P50276	574 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	YGL262W	P53054	175 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	YGL235W	P53071	178 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	RMD9	P53140	646 aa	Known RBP	2.37	□□□□□ -2.03
LCL1	YPL056C	TYW3	P53177	273 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	TAM41	P53230	385 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	COX18	P53239	316 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	VHT1	P53241	593 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	RTT102	P53330	157 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	YGR283C	P53336	341 aa	Predicted RBP	2.37	□□□□□ -2.03
LCL1	YPL056C	IBD2	P53892	351 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	YNL034W	P53963	612 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	ATG21	Q02887	496 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	TMA23	Q03525	211 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	UTP15	Q04305	513 aa	Known RBP	2.37	□□□□□ -2.03
LCL1	YPL056C	AGE1	Q04412	482 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	YML053C	Q04978	212 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	MRX8	Q05473	314 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	DPP1	Q05521	289 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	POS5	Q06892	414 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	NRT1	Q08485	598 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	DCI1	Q08558	271 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	PER33	Q12144	273 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	UBX3	Q12229	455 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	YCT1	Q12235	531 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	LAS17	Q12446	633 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	RAX2	Q12465	1220 aa		2.37	□□□□□ -2.03
LCL1	YPL056C	DET1	Q99288	334 aa	Known RBP	2.37	□□□□□ -2.03
LCL1	YPL056C	HEM2	P05373	342 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	RPL27A	P0C2H6	136 aa	Known RBP	2.36	□□□□□ -2.03
LCL1	YPL056C	RPL27B	P0C2H7	136 aa	Known RBP	2.36	□□□□□ -2.03
LCL1	YPL056C	HEM13	P11353	328 aa	Known RBP	2.36	□□□□□ -2.03
LCL1	YPL056C	CUP2	P15315	225 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	YCR007C	P25354	239 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	FUB1	P25659	250 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	CNE1	P27825	502 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	ATS1	P31386	333 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	ALK2	P32789	676 aa	Predicted RBP	2.36	□□□□□ -2.03
LCL1	YPL056C	SLC1	P33333	303 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	SOR1	P35497	357 aa	Known RBP	2.36	□□□□□ -2.03
LCL1	YPL056C	PAU16	P35994	123 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	KKQ8	P36004	724 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	PAN3	P36102	679 aa	Predicted RBP	2.36	□□□□□ -2.03
LCL1	YPL056C	MRPL24	P36525	258 aa	Predicted RBP	2.36	□□□□□ -2.03
LCL1	YPL056C	MIX23	P38162	196 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	ECM33	P38248	429 aa	Known RBP	2.36	□□□□□ -2.03
LCL1	YPL056C	TAE1	P38340	232 aa		2.36	□□□□□ -2.03
LCL1	YPL056C	YHL041W	P38730	149 aa		2.36	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms