RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C RIB1P38066 345 aa3.31□□□□□ -1.88
VPS21YOR089C YHL044WP38727 235 aa3.31□□□□□ -1.88
VPS21YOR089C YHR127WP38833 243 aaKnown RBP3.31□□□□□ -1.88
VPS21YOR089C AVT2P39981 480 aa3.31□□□□□ -1.88
VPS21YOR089C PGU1P47180 361 aa3.31□□□□□ -1.88
VPS21YOR089C TSA2Q04120 196 aa3.31□□□□□ -1.88
VPS21YOR089C SPG4Q04438 115 aa3.31□□□□□ -1.88
VPS21YOR089C COQ10Q08058 207 aa3.31□□□□□ -1.88
VPS21YOR089C YPL225WQ08971 146 aaKnown RBP3.31□□□□□ -1.88
VPS21YOR089C YAL063C-AQ3E791 96 aa3.31□□□□□ -1.88
VPS21YOR089C YOL085CQ99345 113 aa3.31□□□□□ -1.88
VPS21YOR089C DPB2P24482 689 aaPredicted RBP3.3□□□□□ -1.88
VPS21YOR089C MID2P36027 376 aa3.3□□□□□ -1.88
VPS21YOR089C HMT1P38074 348 aa3.3□□□□□ -1.88
VPS21YOR089C SSH1P38353 490 aaKnown RBP3.3□□□□□ -1.88
VPS21YOR089C GOS1P38736 223 aa3.3□□□□□ -1.88
VPS21YOR089C AIM18P38884 321 aa3.3□□□□□ -1.88
VPS21YOR089C YHB1P39676 399 aaKnown RBP3.3□□□□□ -1.88
VPS21YOR089C RFC4P40339 323 aaKnown RBP3.3□□□□□ -1.88
VPS21YOR089C SYS1P41544 203 aa3.3□□□□□ -1.88
VPS21YOR089C MIC26P50087 233 aa3.3□□□□□ -1.88
VPS21YOR089C YGR067CP53243 804 aa3.3□□□□□ -1.88
VPS21YOR089C ACT1P60010 375 aaKnown RBP3.3□□□□□ -1.88
VPS21YOR089C ECM11Q04110 302 aa3.3□□□□□ -1.88
VPS21YOR089C YDR124WQ04608 324 aa3.3□□□□□ -1.88
VPS21YOR089C LOA1Q06508 300 aa3.3□□□□□ -1.88
VPS21YOR089C PLB3Q08108 686 aa3.3□□□□□ -1.88
VPS21YOR089C RRP40Q08285 240 aaKnown RBP3.3□□□□□ -1.88
VPS21YOR089C GET4Q12125 312 aa3.3□□□□□ -1.88
VPS21YOR089C FUS3P16892 353 aaKnown RBP3.29□□□□□ -1.88
VPS21YOR089C YCR102CP25608 368 aa3.29□□□□□ -1.88
VPS21YOR089C TKL2P33315 681 aa3.29□□□□□ -1.88
VPS21YOR089C GDH2P33327 1092 aaKnown RBP3.29□□□□□ -1.88
VPS21YOR089C ETR1P38071 380 aa3.29□□□□□ -1.88
VPS21YOR089C SLX1P38324 304 aa3.29□□□□□ -1.88
VPS21YOR089C SEO1P39709 593 aa3.29□□□□□ -1.88
VPS21YOR089C BDH1P39714 382 aa3.29□□□□□ -1.88
VPS21YOR089C YMR144WP40214 342 aaKnown RBP3.29□□□□□ -1.88
VPS21YOR089C TMA22P47089 198 aaPredicted RBP3.29□□□□□ -1.88
VPS21YOR089C RAD17P48581 401 aa3.29□□□□□ -1.88
VPS21YOR089C YGR018CP53211 109 aa3.29□□□□□ -1.88
VPS21YOR089C GOT1Q03554 138 aa3.29□□□□□ -1.88
VPS21YOR089C TVP15Q03860 143 aa3.29□□□□□ -1.88
VPS21YOR089C GPM2Q12008 311 aa3.29□□□□□ -1.88
VPS21YOR089C YDR524C-BQ3E6R4 66 aa3.29□□□□□ -1.88
VPS21YOR089C YEL009C-AA0A023PZF2 135 aa3.28□□□□□ -1.88
VPS21YOR089C HAP2P06774 265 aa3.28□□□□□ -1.88
VPS21YOR089C COX10P21592 462 aa3.28□□□□□ -1.88
VPS21YOR089C CBT1P36038 271 aaPredicted RBP3.28□□□□□ -1.88
VPS21YOR089C YKL075CP36083 450 aa3.28□□□□□ -1.88
VPS21YOR089C ERG28P40030 148 aa3.28□□□□□ -1.88
VPS21YOR089C UFD1P53044 361 aa3.28□□□□□ -1.88
VPS21YOR089C NSA1P53136 463 aaPredicted RBP3.28□□□□□ -1.88
VPS21YOR089C CUS2P53830 285 aaPredicted RBP3.28□□□□□ -1.88
VPS21YOR089C CTF19Q02732 369 aa3.28□□□□□ -1.88
VPS21YOR089C CDC123Q05791 360 aa3.28□□□□□ -1.88
VPS21YOR089C YET3Q07451 203 aa3.28□□□□□ -1.88
VPS21YOR089C HEM25Q07534 307 aa3.28□□□□□ -1.88
VPS21YOR089C SYC1Q08553 188 aaPredicted RBP3.28□□□□□ -1.88
VPS21YOR089C YLR053CQ12026 108 aa3.28□□□□□ -1.88
VPS21YOR089C TIR4Q12218 487 aaPredicted RBP3.28□□□□□ -1.88
VPS21YOR089C NOT5Q12514 560 aaPredicted RBP3.28□□□□□ -1.88
VPS21YOR089C BCY1P07278 416 aaKnown RBP3.27□□□□□ -1.89
VPS21YOR089C GPA2P10823 449 aa3.27□□□□□ -1.89
VPS21YOR089C CUP2P15315 225 aa3.27□□□□□ -1.89
VPS21YOR089C CPT1P17898 393 aa3.27□□□□□ -1.89
VPS21YOR089C YBR096WP38256 230 aa3.27□□□□□ -1.89
VPS21YOR089C RTC3P38804 111 aaPredicted RBP3.27□□□□□ -1.89
VPS21YOR089C MCM22P47167 239 aa3.27□□□□□ -1.89
VPS21YOR089C FLC3P53121 802 aa3.27□□□□□ -1.89
VPS21YOR089C MRH4P53166 561 aa3.27□□□□□ -1.89
VPS21YOR089C FYV6P53913 173 aa3.27□□□□□ -1.89
VPS21YOR089C YMR166CQ03829 368 aa3.27□□□□□ -1.89
VPS21YOR089C GRX8Q05926 109 aa3.27□□□□□ -1.89
VPS21YOR089C SLD7Q08457 257 aa3.27□□□□□ -1.89
VPS21YOR089C YDL211CQ12121 372 aa3.27□□□□□ -1.89
VPS21YOR089C YRA1Q12159 226 aaKnown RBP3.27□□□□□ -1.89
VPS21YOR089C JLP1Q12358 412 aa3.27□□□□□ -1.89
VPS21YOR089C YBL008W-AQ3E821 79 aa3.27□□□□□ -1.89
VPS21YOR089C RPL28P02406 149 aaKnown RBP3.26□□□□□ -1.89
VPS21YOR089C SPT3P06844 337 aa3.26□□□□□ -1.89
VPS21YOR089C RPB9P27999 122 aa3.26□□□□□ -1.89
VPS21YOR089C IDH1P28834 360 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
VPS21YOR089C URA8P38627 578 aaPredicted RBP3.26□□□□□ -1.89
VPS21YOR089C TRR2P38816 342 aa3.26□□□□□ -1.89
VPS21YOR089C TEM1P38987 245 aa3.26□□□□□ -1.89
VPS21YOR089C YEL028WP39989 153 aa3.26□□□□□ -1.89
VPS21YOR089C EDC3P39998 551 aaKnown RBP3.26□□□□□ -1.89
VPS21YOR089C RCF2P53721 224 aa3.26□□□□□ -1.89
VPS21YOR089C SMD1Q02260 146 aaPredicted RBP3.26□□□□□ -1.89
VPS21YOR089C YML108WQ03759 105 aa3.26□□□□□ -1.89
VPS21YOR089C FMN1Q03778 218 aa3.26□□□□□ -1.89
VPS21YOR089C SPG3Q04398 127 aaPredicted RBP3.26□□□□□ -1.89
VPS21YOR089C SPC24Q04477 213 aa3.26□□□□□ -1.89
VPS21YOR089C SEI1Q06058 285 aa3.26□□□□□ -1.89
VPS21YOR089C YLR126CQ12288 251 aa3.26□□□□□ -1.89
VPS21YOR089C YPS3Q12303 508 aa3.26□□□□□ -1.89
VPS21YOR089C SMT3Q12306 101 aaKnown RBP3.26□□□□□ -1.89
VPS21YOR089C DCN1Q12395 269 aa3.26□□□□□ -1.89
VPS21YOR089C OCA6Q12454 224 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms