RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C ZEO1Q08245 113 aa4.67□□□□□ -1.66
RAT1YOR048C SWM1Q12379 170 aa4.67□□□□□ -1.66
RAT1YOR048C YCR025CP25352 136 aa4.67□□□□□ -1.66
RAT1YOR048C PTC7P38797 343 aa4.67□□□□□ -1.66
RAT1YOR048C ELO1P39540 310 aa4.67□□□□□ -1.66
RAT1YOR048C SHO1P40073 367 aa4.67□□□□□ -1.66
RAT1YOR048C PEF1P53238 335 aa4.67□□□□□ -1.66
RAT1YOR048C COX19Q3E731 98 aa4.67□□□□□ -1.66
RAT1YOR048C YIL134C-AQ45U18 67 aa4.67□□□□□ -1.66
RAT1YOR048C CYT1P07143 309 aa4.67□□□□□ -1.66
RAT1YOR048C SEC62P21825 274 aa4.67□□□□□ -1.66
RAT1YOR048C SRX1P36077 127 aa4.67□□□□□ -1.66
RAT1YOR048C PRP39P39682 629 aaKnown RBP4.67□□□□□ -1.66
RAT1YOR048C HIT1P46973 164 aa4.67□□□□□ -1.66
RAT1YOR048C SUN4P53616 420 aa4.67□□□□□ -1.66
RAT1YOR048C PKR1Q03880 122 aaKnown RBP4.67□□□□□ -1.66
RAT1YOR048C ATG5Q12380 294 aa4.67□□□□□ -1.66
RAT1YOR048C HAA1Q12753 694 aaKnown RBP4.67□□□□□ -1.66
RAT1YOR048C YAL064W-BO13512 126 aa4.66□□□□□ -1.66
RAT1YOR048C SWD2P36104 329 aaPredicted RBP4.66□□□□□ -1.66
RAT1YOR048C SHB17P36136 271 aaKnown RBP4.66□□□□□ -1.66
RAT1YOR048C WSC4P38739 605 aa4.66□□□□□ -1.66
RAT1YOR048C YJL193WP39542 402 aa4.66□□□□□ -1.66
RAT1YOR048C TOK1P40310 691 aa4.66□□□□□ -1.66
RAT1YOR048C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
RAT1YOR048C MDM30Q05930 598 aa4.66□□□□□ -1.66
RAT1YOR048C MRX9Q07349 420 aaKnown RBP4.66□□□□□ -1.66
RAT1YOR048C COQ10Q08058 207 aa4.66□□□□□ -1.66
RAT1YOR048C VAM3Q12241 283 aa4.66□□□□□ -1.66
RAT1YOR048C LAS17Q12446 633 aa4.66□□□□□ -1.66
RAT1YOR048C YDR034W-BQ6Q5X2 51 aa4.66□□□□□ -1.66
RAT1YOR048C UBA3Q99344 299 aa4.66□□□□□ -1.66
RAT1YOR048C TRA1P38811 3744 aa4.66□□□□□ -1.66
RAT1YOR048C MES1P00958 751 aaKnown RBP4.66□□□□□ -1.66
RAT1YOR048C ADH3P07246 375 aaKnown RBP4.66□□□□□ -1.66
RAT1YOR048C YCR006CP25350 157 aa4.66□□□□□ -1.66
RAT1YOR048C ERG2P32352 222 aa4.66□□□□□ -1.66
RAT1YOR048C SCM4P32564 187 aa4.66□□□□□ -1.66
RAT1YOR048C PIG2P40187 538 aa4.66□□□□□ -1.66
RAT1YOR048C RTS2P40962 232 aa4.66□□□□□ -1.66
RAT1YOR048C YJR012CP47087 207 aa4.66□□□□□ -1.66
RAT1YOR048C APJ1P53940 528 aa4.66□□□□□ -1.66
RAT1YOR048C MHR1Q06630 226 aa4.66□□□□□ -1.66
RAT1YOR048C FRE7Q12333 620 aa4.66□□□□□ -1.66
RAT1YOR048C TAD3Q9URQ3 322 aa4.66□□□□□ -1.66
RAT1YOR048C GLC7P32598 312 aaKnown RBP4.65□□□□□ -1.66
RAT1YOR048C PAC2P39937 518 aa4.65□□□□□ -1.66
RAT1YOR048C HUA1P40325 198 aa4.65□□□□□ -1.66
RAT1YOR048C IDP2P41939 412 aa4.65□□□□□ -1.66
RAT1YOR048C SWS2P53937 143 aa4.65□□□□□ -1.66
RAT1YOR048C TMA23Q03525 211 aa4.65□□□□□ -1.66
RAT1YOR048C FSH2Q05015 223 aa4.65□□□□□ -1.66
RAT1YOR048C BNA5Q05979 453 aa4.65□□□□□ -1.66
RAT1YOR048C SME1Q12330 94 aaPredicted RBP4.65□□□□□ -1.66
RAT1YOR048C ISA2Q12425 185 aa4.65□□□□□ -1.66
RAT1YOR048C YHR214C-EQ8TGK0 99 aa4.65□□□□□ -1.66
RAT1YOR048C CPR4P25334 318 aa4.65□□□□□ -1.67
RAT1YOR048C LNP1P38878 278 aa4.65□□□□□ -1.67
RAT1YOR048C YIL169CP40442 995 aa4.65□□□□□ -1.67
RAT1YOR048C FLX1P40464 311 aa4.65□□□□□ -1.67
RAT1YOR048C YPL108WQ02872 168 aaPredicted RBP4.65□□□□□ -1.67
RAT1YOR048C YPL039WQ03080 316 aa4.65□□□□□ -1.67
RAT1YOR048C YMR090WQ04304 227 aaKnown RBP4.65□□□□□ -1.67
RAT1YOR048C SDO1Q07953 250 aaKnown RBP4.65□□□□□ -1.67
RAT1YOR048C MCP1Q12106 302 aa4.65□□□□□ -1.67
RAT1YOR048C YCT1Q12235 531 aa4.65□□□□□ -1.67
RAT1YOR048C GLO4Q12320 285 aa4.65□□□□□ -1.67
RAT1YOR048C QCR2P07257 368 aa4.64□□□□□ -1.67
RAT1YOR048C POG1P40473 351 aa4.64□□□□□ -1.67
RAT1YOR048C MID1P41821 548 aa4.64□□□□□ -1.67
RAT1YOR048C SHR5P41912 237 aa4.64□□□□□ -1.67
RAT1YOR048C FIT1Q04433 528 aa4.64□□□□□ -1.67
RAT1YOR048C MRPL51Q06090 140 aaPredicted RBP4.64□□□□□ -1.67
RAT1YOR048C YDL242WQ07746 117 aa4.64□□□□□ -1.67
RAT1YOR048C HUG1Q6Q5K6 68 aa4.64□□□□□ -1.67
RAT1YOR048C COQ3P27680 312 aa4.64□□□□□ -1.67
RAT1YOR048C CWP1P28319 239 aa4.64□□□□□ -1.67
RAT1YOR048C LAC1P28496 418 aa4.64□□□□□ -1.67
RAT1YOR048C CLB6P32943 380 aa4.64□□□□□ -1.67
RAT1YOR048C SRB7P47822 140 aa4.64□□□□□ -1.67
RAT1YOR048C AVO2Q04749 426 aa4.64□□□□□ -1.67
RAT1YOR048C HOF1Q05080 669 aa4.64□□□□□ -1.67
RAT1YOR048C THI73Q07904 523 aa4.64□□□□□ -1.67
RAT1YOR048C AIM45Q12480 344 aaKnown RBP4.64□□□□□ -1.67
RAT1YOR048C TMA7Q3E764 64 aaKnown RBP4.64□□□□□ -1.67
RAT1YOR048C YPR014CQ6B0W2 109 aa4.64□□□□□ -1.67
RAT1YOR048C MPD2Q99316 277 aa4.64□□□□□ -1.67
RAT1YOR048C MSW1P04803 379 aa4.64□□□□□ -1.67
RAT1YOR048C IMG1P25626 169 aa4.64□□□□□ -1.67
RAT1YOR048C SLZ1P40167 298 aa4.64□□□□□ -1.67
RAT1YOR048C GWT1P47026 490 aa4.64□□□□□ -1.67
RAT1YOR048C TIM21P53220 239 aa4.64□□□□□ -1.67
RAT1YOR048C IRC19Q07843 230 aa4.64□□□□□ -1.67
RAT1YOR048C IRC13Q08630 104 aa4.64□□□□□ -1.67
RAT1YOR048C RDL2Q08742 149 aaKnown RBP4.64□□□□□ -1.67
RAT1YOR048C GLT1Q12680 2145 aaKnown RBP4.64□□□□□ -1.67
RAT1YOR048C TRP4P07285 380 aaPredicted RBP4.63□□□□□ -1.67
RAT1YOR048C FAT1P38225 669 aa4.63□□□□□ -1.67
RAT1YOR048C YGR149WP48236 432 aa4.63□□□□□ -1.67
RAT1YOR048C YMR265CQ03508 461 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms