RNA–Protein interactions for RNA: YNL325C

FIG4, Transcript of Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase, yeast

Gene FIG4, Length 2,640 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIG4	YNL325C	SFC1	P33303	322 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	RPL10	P41805	221 aa	Known RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	SMD3	P43321	101 aa	Known RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	YJL028W	P47062	111 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	YJL016W	P47072	561 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	EMC2	P47133	292 aa	Known RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	TIM21	P53220	239 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
FIG4	YNL325C	CGI121	Q03705	181 aa	Known RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	YMR114C	Q04471	368 aa	Known RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	YOL019W	Q08157	551 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	VPS3	P23643	1011 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	YKR032W	P36127	104 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	CTR2	P38865	189 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	SPT8	P38915	602 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	NBP1	P52919	319 aa	Predicted RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	SLX9	P53251	210 aa	Predicted RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	COS6	P53344	381 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	ASI3	P53983	676 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	CTF19	Q02732	369 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	OST6	Q03723	332 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	YDR114C	Q04597	100 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	PEX10	Q05568	337 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	CTR3	Q06686	241 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	PLB3	Q08108	686 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	RSR1	P13856	272 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	RPS5	P26783	225 aa	Known RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	RIP-Chip
FIG4	YNL325C	TRS20	P38334	175 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	GOS1	P38736	223 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	DOG1	P38774	246 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	YJL118W	P47022	219 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	YJR012C	P47087	207 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	SYF2	P53277	215 aa	Predicted RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	SSU72	P53538	206 aa	Predicted RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	EBS1	Q03466	884 aa	Known RBP	0.85	□□□□□ -2.27
FIG4	YNL325C	PEX12	Q04370	399 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	YLR283W	Q05867	314 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	YOR186W	Q08560	144 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	MSH5	Q12175	901 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	GEP5	Q12393	293 aa		0.85	□□□□□ -2.27
FIG4	YNL325C	COX5A	P00424	153 aa		0.84	□□□□□ -2.27
FIG4	YNL325C	CDC36	P06100	191 aa	Predicted RBP	0.84	□□□□□ -2.27
FIG4	YNL325C	RAD3	P06839	778 aa		0.84	□□□□□ -2.27
FIG4	YNL325C	SCM4	P32564	187 aa		0.84	□□□□□ -2.27
FIG4	YNL325C	HOC1	P47124	396 aa		0.84	□□□□□ -2.27
FIG4	YNL325C	MPP6	P53725	186 aa	Predicted RBP	0.84	□□□□□ -2.27
FIG4	YNL325C	KRE28	Q04431	385 aa		0.84	□□□□□ -2.27
FIG4	YNL325C	DCR2	Q05924	578 aa		0.84	□□□□□ -2.27
FIG4	YNL325C	BOP2	Q06150	570 aa		0.84	□□□□□ -2.27
FIG4	YNL325C	SYC1	Q08553	188 aa	Predicted RBP	0.84	□□□□□ -2.27
FIG4	YNL325C	YEL009C-A	A0A023PZF2	135 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	YLR462W	O13556	202 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	HAP2	P06774	265 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	RAD10	P06838	210 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	ERD2	P18414	219 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	JEN1	P36035	616 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	MED6	P38782	295 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	BIG1	P38813	335 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	YEL075C	P39972	122 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	FCY21	P40039	528 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	YER189W	P40104	122 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	MNN5	P46982	586 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	YJR149W	P47177	404 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	FAR8	Q05040	523 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	YLR173W	Q06247	608 aa		0.84	□□□□□ -2.28
FIG4	YNL325C	YKR104W	P0CE69	306 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	RPS24A	P0CX31	135 aa	Known RBP	0.83	□□□□□ -2.28
FIG4	YNL325C	RPS24B	P0CX32	135 aa	Known RBP	0.83	□□□□□ -2.28
FIG4	YNL325C	RNP1	P32385	249 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	YUH1	P35127	236 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	SNZ3	P43545	298 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	OST2	P46964	130 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	YJR079W	P47126	109 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	YNL046W	P53956	172 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	DID2	P69771	204 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	GRH1	Q04410	372 aa	Known RBP	0.83	□□□□□ -2.28
FIG4	YNL325C	SEI1	Q06058	285 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	YOR283W	Q12040	230 aa	Known RBP	0.83	□□□□□ -2.28
FIG4	YNL325C	YCT1	Q12235	531 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	YPL119C-A	Q3E751	87 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	Q0255	P03881	472 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	RNA15	P25299	296 aa	Predicted RBP	0.83	□□□□□ -2.28
FIG4	YNL325C	YHB1	P39676	399 aa	Known RBP	0.83	□□□□□ -2.28
FIG4	YNL325C	HMF1	P40037	129 aa	Known RBP	0.83	□□□□□ -2.28
FIG4	YNL325C	RPA43	P46669	326 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	GON7	P46984	123 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	MIX17	Q03667	156 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	SPG4	Q04438	115 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	ATG17	Q06410	417 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	EMC6	Q12431	108 aa		0.83	□□□□□ -2.28
FIG4	YNL325C	SNF6	P18888	332 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	SEC22	P22214	214 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	PEX34	P25584	144 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	DOA4	P32571	926 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
FIG4	YNL325C	COS8	P38723	381 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	YER188W	P40103	239 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	RPC17	P47076	161 aa		0.82	□□□□□ -2.28
FIG4	YNL325C	RRN5	Q02983	363 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms