RNA–Protein interactions for RNA: YMR213W

CEF1, Transcript of Essential splicing factor, yeast

Gene CEF1, Length 1,773 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CEF1	YMR213W	DCG1	P32460	244 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	PPZ2	P33329	710 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	QDR3	P38227	689 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	ICS2	P38284	255 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	DOG1	P38774	246 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	CDC40	P40968	455 aa	Predicted RBP	5.68	□□□□□ -1.5
CEF1	YMR213W	PMT3	P47190	753 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	MUP1	P50276	574 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	NIF3	P53081	288 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	HHT1	P61830	136 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	MTQ2	Q03920	221 aa	Predicted RBP	5.68	□□□□□ -1.5
CEF1	YMR213W	SPG3	Q04398	127 aa	Predicted RBP	5.68	□□□□□ -1.5
CEF1	YMR213W	GAS5	Q08193	484 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	NDD1	Q08887	554 aa		5.68	□□□□□ -1.5
CEF1	YMR213W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
CEF1	YMR213W	AIR2	Q12476	344 aa	Known RBP	5.68	□□□□□ -1.5
CEF1	YMR213W	CYC7	P00045	113 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	DAL82	P21705	255 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	CWP1	P28319	239 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	ERG3	P32353	365 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	YHL041W	P38730	149 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	PEX7	P39108	375 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	SNU13	P39990	126 aa	Known RBP	5.67	□□□□□ -1.5
CEF1	YMR213W	HMF1	P40037	129 aa	Known RBP	5.67	□□□□□ -1.5
CEF1	YMR213W	YIL067C	P40514	678 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	OTU1	P43558	301 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	YDR444W	Q04093	687 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	YML053C	Q04978	212 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	RAX2	Q12465	1220 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	ATG27	P46989	271 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	ELC1	Q03071	99 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	MET32	Q12041	191 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	YOR338W	Q99326	363 aa		5.67	□□□□□ -1.5
CEF1	YMR213W	YPR096C	O13587	100 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
CEF1	YMR213W	STF1	P01098	86 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	RPB5	P20434	215 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	FMT1	P32785	401 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	THI80	P35202	319 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	FMO1	P38866	432 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	HSP10	P38910	106 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	VPS25	P47142	202 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	YPL062W	Q02781	134 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	YPL077C	Q02831	240 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	ECM22	Q05958	814 aa	Predicted RBP	5.66	□□□□□ -1.5
CEF1	YMR213W	BSC6	Q08280	497 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	YDL157C	Q12082	118 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	RPL13A	Q12690	199 aa	Predicted RBP	5.66	□□□□□ -1.5
CEF1	YMR213W	YLR149C	Q99296	730 aa		5.66	□□□□□ -1.5
CEF1	YMR213W	CDC21	P06785	304 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	EMP70	P32802	667 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	YKL187C	P34231	750 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	MRPL27	P36526	146 aa	Predicted RBP	5.65	□□□□□ -1.5
CEF1	YMR213W	YBR071W	P38243	211 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	PAC2	P39937	518 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	YIL060W	P40519	144 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	SGF73	P53165	657 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	HST3	P53687	447 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	YNR061C	P53747	219 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	MSC2	Q03455	724 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	ASM4	Q05166	528 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	HRI1	Q05905	244 aa	Known RBP	5.65	□□□□□ -1.5
CEF1	YMR213W	TGS1	Q12052	315 aa		5.65	□□□□□ -1.5
CEF1	YMR213W	YLR050C	Q12155	161 aa	Known RBP	5.65	□□□□□ -1.5
CEF1	YMR213W	TPT1	Q12272	230 aa	Known RBP	5.65	□□□□□ -1.5
CEF1	YMR213W	COX9	P07255	59 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	CPA1	P07258	411 aa	Known RBP	5.65	□□□□□ -1.51
CEF1	YMR213W	TIR1	P10863	254 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	SCH9	P11792	824 aa	Known RBP	5.65	□□□□□ -1.51
CEF1	YMR213W	MKK1	P32490	508 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	YKL107W	P34251	309 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	MCR1	P36060	302 aa	Known RBP	5.65	□□□□□ -1.51
CEF1	YMR213W	ARC40	P38328	384 aa	Known RBP	5.65	□□□□□ -1.51
CEF1	YMR213W	YBR292C	P38357	123 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	YEA6	P39953	335 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	GPP1	P41277	250 aa	Known RBP	5.65	□□□□□ -1.51
CEF1	YMR213W	SMK1	P41808	388 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	SMD3	P43321	101 aa	Known RBP	5.65	□□□□□ -1.51
CEF1	YMR213W	BAT2	P47176	376 aa	Known RBP	5.65	□□□□□ -1.51
CEF1	YMR213W	YNL260C	P53846	198 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	SMX3	P54999	86 aa	Predicted RBP	5.65	□□□□□ -1.51
CEF1	YMR213W	SEI1	Q06058	285 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	LOA1	Q06508	300 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	TAZ1	Q06510	381 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	ODC2	Q99297	307 aa		5.65	□□□□□ -1.51
CEF1	YMR213W	MBF1	O14467	151 aa	Known RBP	5.64	□□□□□ -1.51
CEF1	YMR213W	INH1	P01097	85 aa		5.64	□□□□□ -1.51
CEF1	YMR213W	YFL068W	P0CX99	160 aa		5.64	□□□□□ -1.51
CEF1	YMR213W	YLL066W-A	P0CY00	160 aa		5.64	□□□□□ -1.51
CEF1	YMR213W	YLL067W-A	P0CY01	160 aa		5.64	□□□□□ -1.51
CEF1	YMR213W	URK1	P27515	501 aa		5.64	□□□□□ -1.51
CEF1	YMR213W	IDH2	P28241	369 aa	Known RBP	5.64	□□□□□ -1.51
CEF1	YMR213W	RPL14A	P36105	138 aa	Known RBP	5.64	□□□□□ -1.51
CEF1	YMR213W	GEX2	P36173	615 aa		5.64	□□□□□ -1.51
CEF1	YMR213W	RPL14B	P38754	138 aa	Known RBP	5.64	□□□□□ -1.51
CEF1	YMR213W	YPT35	P38815	214 aa	Known RBP	5.64	□□□□□ -1.51
CEF1	YMR213W	HEM14	P40012	539 aa		5.64	□□□□□ -1.51
CEF1	YMR213W	IST3	P40565	148 aa	Predicted RBP	5.64	□□□□□ -1.51
CEF1	YMR213W	YGR015C	P53208	328 aa		5.64	□□□□□ -1.51
CEF1	YMR213W	YGR035C	P53222	116 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms