RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W EMC4P53073 190 aa4.69□□□□□ -1.66
SPG4YMR107W RHO3Q00245 231 aaKnown RBP4.69□□□□□ -1.66
SPG4YMR107W RSM23Q01163 450 aa4.69□□□□□ -1.66
SPG4YMR107W EKI1Q03764 534 aa4.69□□□□□ -1.66
SPG4YMR107W RTT103Q05543 409 aa4.69□□□□□ -1.66
SPG4YMR107W SNT309Q06091 175 aaPredicted RBP4.69□□□□□ -1.66
SPG4YMR107W FDH1Q08911 376 aa4.69□□□□□ -1.66
SPG4YMR107W YPL272CQ08984 517 aa4.69□□□□□ -1.66
SPG4YMR107W YOR015WQ12169 119 aa4.69□□□□□ -1.66
SPG4YMR107W YLR146W-AQ2V2P1 62 aa4.69□□□□□ -1.66
SPG4YMR107W COA2Q3E823 68 aa4.69□□□□□ -1.66
SPG4YMR107W OLE1P21147 510 aaKnown RBP4.68□□□□□ -1.66
SPG4YMR107W ALK2P32789 676 aaPredicted RBP4.68□□□□□ -1.66
SPG4YMR107W UPS2P35200 230 aa4.68□□□□□ -1.66
SPG4YMR107W RPL14AP36105 138 aaKnown RBP4.68□□□□□ -1.66
SPG4YMR107W RPL14BP38754 138 aaKnown RBP4.68□□□□□ -1.66
SPG4YMR107W PFS1P38872 237 aa4.68□□□□□ -1.66
SPG4YMR107W APQ12P40532 138 aa4.68□□□□□ -1.66
SPG4YMR107W IKS1P47042 667 aa4.68□□□□□ -1.66
SPG4YMR107W YJL028WP47062 111 aa4.68□□□□□ -1.66
SPG4YMR107W BXI1P48558 297 aa4.68□□□□□ -1.66
SPG4YMR107W UPS3Q04006 179 aa4.68□□□□□ -1.66
SPG4YMR107W THI74Q04083 370 aa4.68□□□□□ -1.66
SPG4YMR107W DPB4Q04603 196 aaKnown RBP4.68□□□□□ -1.66
SPG4YMR107W ROY1Q04847 553 aa4.68□□□□□ -1.66
SPG4YMR107W FSH2Q05015 223 aa4.68□□□□□ -1.66
SPG4YMR107W YPR114WQ06107 315 aa4.68□□□□□ -1.66
SPG4YMR107W YLR179CQ06252 201 aaKnown RBP4.68□□□□□ -1.66
SPG4YMR107W LEA1Q08963 238 aaPredicted RBP4.68□□□□□ -1.66
SPG4YMR107W MCT1Q12283 360 aa4.68□□□□□ -1.66
SPG4YMR107W YPR064WQ12492 139 aa4.68□□□□□ -1.66
SPG4YMR107W MBF1O14467 151 aaKnown RBP4.67□□□□□ -1.66
SPG4YMR107W MES1P00958 751 aaKnown RBP4.67□□□□□ -1.66
SPG4YMR107W POR1P04840 283 aaKnown RBP4.67□□□□□ -1.66
SPG4YMR107W AUR1P36107 401 aaPredicted RBP4.67□□□□□ -1.66
SPG4YMR107W RIB5P38145 238 aa4.67□□□□□ -1.66
SPG4YMR107W ECM34P38728 170 aa4.67□□□□□ -1.66
SPG4YMR107W ANS1P38832 159 aa4.67□□□□□ -1.66
SPG4YMR107W CIN5P40917 295 aa4.67□□□□□ -1.66
SPG4YMR107W RPA34P47006 233 aaPredicted RBP4.67□□□□□ -1.66
SPG4YMR107W NSA1P53136 463 aaPredicted RBP4.67□□□□□ -1.66
SPG4YMR107W ALG12P53730 551 aa4.67□□□□□ -1.66
SPG4YMR107W CWC27Q02770 301 aa4.67□□□□□ -1.66
SPG4YMR107W YML018CQ03730 393 aa4.67□□□□□ -1.66
SPG4YMR107W RTN1Q04947 295 aaKnown RBP4.67□□□□□ -1.66
SPG4YMR107W PAU23Q07987 124 aa4.67□□□□□ -1.66
SPG4YMR107W CSI2Q08054 341 aa4.67□□□□□ -1.66
SPG4YMR107W YDL157CQ12082 118 aa4.67□□□□□ -1.66
SPG4YMR107W YCT1Q12235 531 aa4.67□□□□□ -1.66
SPG4YMR107W PAU17Q12370 124 aa4.67□□□□□ -1.66
SPG4YMR107W YDR157WA0A023PZE8 133 aa4.66□□□□□ -1.66
SPG4YMR107W COX2P00410 251 aa4.66□□□□□ -1.66
SPG4YMR107W ADE8P04161 214 aa4.66□□□□□ -1.66
SPG4YMR107W RFA1P22336 621 aaKnown RBP4.66□□□□□ -1.66
SPG4YMR107W SUA7P29055 345 aaPredicted RBP4.66□□□□□ -1.66
SPG4YMR107W AHT1P29589 182 aa4.66□□□□□ -1.66
SPG4YMR107W PRE2P30656 287 aaKnown RBP4.66□□□□□ -1.66
SPG4YMR107W MDH3P32419 343 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
SPG4YMR107W TIM12P32830 109 aa4.66□□□□□ -1.66
SPG4YMR107W ARC40P38328 384 aaKnown RBP4.66□□□□□ -1.66
SPG4YMR107W MXR1P40029 184 aa4.66□□□□□ -1.66
SPG4YMR107W GIP2P40036 548 aa4.66□□□□□ -1.66
SPG4YMR107W SFH5P47008 294 aa4.66□□□□□ -1.66
SPG4YMR107W NNF1P47149 201 aa4.66□□□□□ -1.66
SPG4YMR107W LST7P53237 242 aa4.66□□□□□ -1.66
SPG4YMR107W MRP51Q02950 344 aa4.66□□□□□ -1.66
SPG4YMR107W NAT4Q04751 285 aa4.66□□□□□ -1.66
SPG4YMR107W MRL1Q06815 381 aa4.66□□□□□ -1.66
SPG4YMR107W YDR215CQ12240 137 aa4.66□□□□□ -1.66
SPG4YMR107W SUL2Q12325 893 aa4.66□□□□□ -1.66
SPG4YMR107W MSW1P04803 379 aa4.65□□□□□ -1.67
SPG4YMR107W OPI3P05375 206 aa4.65□□□□□ -1.67
SPG4YMR107W RPB5P20434 215 aa4.65□□□□□ -1.67
SPG4YMR107W MCK1P21965 375 aaKnown RBP4.65□□□□□ -1.67
SPG4YMR107W SLC1P33333 303 aa4.65□□□□□ -1.67
SPG4YMR107W YIL067CP40514 678 aa4.65□□□□□ -1.67
SPG4YMR107W GLC8P41818 229 aa4.65□□□□□ -1.67
SPG4YMR107W YPL067CQ02754 198 aa4.65□□□□□ -1.67
SPG4YMR107W RCE1Q03530 315 aa4.65□□□□□ -1.67
SPG4YMR107W INP1Q03694 420 aa4.65□□□□□ -1.67
SPG4YMR107W YPQ1Q12010 308 aa4.65□□□□□ -1.67
SPG4YMR107W FCF2Q12035 217 aaPredicted RBP4.65□□□□□ -1.67
SPG4YMR107W RDL1Q12305 139 aaKnown RBP4.65□□□□□ -1.67
SPG4YMR107W PRR2Q12310 699 aa4.65□□□□□ -1.67
SPG4YMR107W YMR084WA2P2R3 262 aa4.64□□□□□ -1.67
SPG4YMR107W STE7P06784 515 aa4.64□□□□□ -1.67
SPG4YMR107W HAP3P13434 144 aa4.64□□□□□ -1.67
SPG4YMR107W STP22P25604 385 aa4.64□□□□□ -1.67
SPG4YMR107W GCS1P35197 352 aa4.64□□□□□ -1.67
SPG4YMR107W MRPL11P36521 249 aaPredicted RBP4.64□□□□□ -1.67
SPG4YMR107W PEX7P39108 375 aa4.64□□□□□ -1.67
SPG4YMR107W JHD1P40034 492 aa4.64□□□□□ -1.67
SPG4YMR107W YIL169CP40442 995 aa4.64□□□□□ -1.67
SPG4YMR107W GPP1P41277 250 aaKnown RBP4.64□□□□□ -1.67
SPG4YMR107W PRY1P47032 299 aa4.64□□□□□ -1.67
SPG4YMR107W SGF73P53165 657 aa4.64□□□□□ -1.67
SPG4YMR107W SCW4P53334 386 aaKnown RBP4.64□□□□□ -1.67
SPG4YMR107W PDR16P53860 351 aaKnown RBP4.64□□□□□ -1.67
SPG4YMR107W RNH201P53942 307 aa4.64□□□□□ -1.67
SPG4YMR107W CTF19Q02732 369 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms