RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C SNU23Q12368 194 aaPredicted RBP0.97□□□□□ -2.25
UBX4YMR067C BNI1P41832 1953 aa0.97□□□□□ -2.25
UBX4YMR067C SPT6P23615 1451 aaKnown RBP0.97□□□□□ -2.25
UBX4YMR067C RPA190P10964 1664 aaKnown RBP0.97□□□□□ -2.25
UBX4YMR067C ESC1Q03661 1658 aaKnown RBP0.97□□□□□ -2.25
UBX4YMR067C BUD4P47136 1447 aa0.97□□□□□ -2.25
UBX4YMR067C MYO2P19524 1574 aaKnown RBP0.96□□□□□ -2.26
UBX4YMR067C IRC20Q06554 1556 aa0.96□□□□□ -2.26
UBX4YMR067C CDC8P00572 216 aa0.96□□□□□ -2.26
UBX4YMR067C FZF1P32805 299 aa0.96□□□□□ -2.26
UBX4YMR067C KDX1P36005 433 aa0.96□□□□□ -2.26
UBX4YMR067C RRF1P38771 230 aa0.96□□□□□ -2.26
UBX4YMR067C PGD1P40356 397 aa0.96□□□□□ -2.26
UBX4YMR067C GPI8P49018 411 aa0.96□□□□□ -2.26
UBX4YMR067C RHO3Q00245 231 aaKnown RBP0.96□□□□□ -2.26
UBX4YMR067C SEI1Q06058 285 aa0.96□□□□□ -2.26
UBX4YMR067C DNF1P32660 1571 aa0.96□□□□□ -2.26
UBX4YMR067C YCF1P39109 1515 aaKnown RBP0.95□□□□□ -2.26
UBX4YMR067C QCR8P08525 94 aa0.95□□□□□ -2.26
UBX4YMR067C POL30P15873 258 aaKnown RBP0.95□□□□□ -2.26
UBX4YMR067C FCY2P17064 533 aa0.95□□□□□ -2.26
UBX4YMR067C YHR127WP38833 243 aaKnown RBP0.95□□□□□ -2.26
UBX4YMR067C BFR1P38934 470 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26 RIP-Chip
UBX4YMR067C YNL217WP40152 326 aa0.95□□□□□ -2.26
UBX4YMR067C ABF2Q02486 183 aa0.95□□□□□ -2.26
UBX4YMR067C SSQ1Q05931 657 aaPredicted RBP0.95□□□□□ -2.26
UBX4YMR067C CDC25P04821 1589 aa0.95□□□□□ -2.26
UBX4YMR067C SSK2P53599 1579 aa0.95□□□□□ -2.26
UBX4YMR067C ATG2P53855 1592 aa0.95□□□□□ -2.26
UBX4YMR067C RPL27BP0C2H7 136 aaKnown RBP0.94□□□□□ -2.26
UBX4YMR067C YBR063CP38083 404 aa0.94□□□□□ -2.26
UBX4YMR067C YER076CP40049 302 aa0.94□□□□□ -2.26
UBX4YMR067C CAT5P41735 233 aa0.94□□□□□ -2.26
UBX4YMR067C UBC7Q02159 165 aa0.94□□□□□ -2.26
UBX4YMR067C ANT1Q06497 328 aa0.94□□□□□ -2.26
UBX4YMR067C TY1B-BRQ12193 1756 aa0.93□□□□□ -2.26
UBX4YMR067C TY1B-GR3Q12316 1755 aa0.93□□□□□ -2.26
UBX4YMR067C TY1B-ORQ92393 1755 aa0.93□□□□□ -2.26
UBX4YMR067C DNF2Q12675 1612 aa0.93□□□□□ -2.26
UBX4YMR067C LTE1P07866 1435 aa0.93□□□□□ -2.26
UBX4YMR067C TAF2P23255 1407 aa0.93□□□□□ -2.26
UBX4YMR067C YKL075CP36083 450 aa0.93□□□□□ -2.26
UBX4YMR067C MEP1P40260 492 aa0.93□□□□□ -2.26
UBX4YMR067C YML096WQ04489 525 aa0.93□□□□□ -2.26
UBX4YMR067C SDO1Q07953 250 aaKnown RBP0.93□□□□□ -2.26
UBX4YMR067C YOR093CQ12275 1648 aa0.93□□□□□ -2.26
UBX4YMR067C RKR1Q04781 1562 aa0.92□□□□□ -2.26
UBX4YMR067C MET5P47169 1442 aa0.92□□□□□ -2.26
UBX4YMR067C NTE1Q04958 1679 aa0.92□□□□□ -2.26
UBX4YMR067C MRPL37P36532 105 aa0.92□□□□□ -2.26
UBX4YMR067C YMR144WP40214 342 aaKnown RBP0.92□□□□□ -2.26
UBX4YMR067C AIF1P52923 378 aa0.92□□□□□ -2.26
UBX4YMR067C YML108WQ03759 105 aa0.92□□□□□ -2.26
UBX4YMR067C MSA1Q08471 629 aa0.92□□□□□ -2.26
UBX4YMR067C PSF1Q12488 208 aa0.92□□□□□ -2.26
UBX4YMR067C TY2B-LR1P0C2J3 1770 aa0.92□□□□□ -2.26
UBX4YMR067C YRF1-1P0CX20 1796 aa0.92□□□□□ -2.26
UBX4YMR067C YRF1-5P0CX21 1796 aa0.92□□□□□ -2.26
UBX4YMR067C YRF1-8P0CX22 1796 aa0.92□□□□□ -2.26
UBX4YMR067C TY2B-FP0CX63 1770 aa0.92□□□□□ -2.26
UBX4YMR067C TY2B-GR2P0CX64 1770 aa0.92□□□□□ -2.26
UBX4YMR067C TY2B-CP25384 1770 aa0.92□□□□□ -2.26
UBX4YMR067C TY2B-DR2Q03494 1770 aa0.92□□□□□ -2.26
UBX4YMR067C TY1B-DR1Q03855 1755 aa0.92□□□□□ -2.26
UBX4YMR067C TY2B-DR3Q07791 1770 aaKnown RBP0.92□□□□□ -2.26
UBX4YMR067C TY2B-OR1Q12113 1770 aa0.92□□□□□ -2.26
UBX4YMR067C TY2B-DR1Q12472 1770 aa0.92□□□□□ -2.26
UBX4YMR067C TY2B-OR2Q12501 1770 aa0.92□□□□□ -2.26
UBX4YMR067C RPO31P04051 1460 aa0.92□□□□□ -2.26
UBX4YMR067C GEA2P39993 1459 aaKnown RBP0.92□□□□□ -2.26
UBX4YMR067C MMS1Q06211 1407 aa0.91□□□□□ -2.26
UBX4YMR067C TY1B-HO13535 1793 aa0.91□□□□□ -2.26
UBX4YMR067C TY1B-DR5P0C2I2 1755 aa0.91□□□□□ -2.26
UBX4YMR067C TY1B-DR6P0C2I3 1755 aa0.91□□□□□ -2.26
UBX4YMR067C TY1B-LR2P0C2I5 1755 aa0.91□□□□□ -2.26
UBX4YMR067C TY1B-LR3P0C2I6 1755 aaKnown RBP0.91□□□□□ -2.26
UBX4YMR067C TY1B-PR1P0C2I9 1755 aaKnown RBP0.91□□□□□ -2.26
UBX4YMR067C TY1B-PR2P0C2J0 1756 aa0.91□□□□□ -2.26
UBX4YMR067C TY1B-PR3P0C2J1 1755 aaKnown RBP0.91□□□□□ -2.26
UBX4YMR067C TY1B-JR1P47098 1755 aa0.91□□□□□ -2.26
UBX4YMR067C TY1B-ML2Q03434 1755 aaKnown RBP0.91□□□□□ -2.26
UBX4YMR067C TY1B-ER1Q03612 1755 aa0.91□□□□□ -2.26
UBX4YMR067C TY1B-ML1Q04711 1755 aaKnown RBP0.91□□□□□ -2.26
UBX4YMR067C TY1B-GR2Q12269 1755 aa0.91□□□□□ -2.26
UBX4YMR067C TY1B-OLQ12273 1755 aa0.91□□□□□ -2.26
UBX4YMR067C TY1B-PLQ12414 1755 aaKnown RBP0.91□□□□□ -2.26
UBX4YMR067C ESP1Q03018 1630 aa0.91□□□□□ -2.26
UBX4YMR067C MSF1P08425 469 aa0.91□□□□□ -2.26
UBX4YMR067C RPS5P26783 225 aaKnown RBP0.91□□□□□ -2.26
UBX4YMR067C MPP6P53725 186 aaPredicted RBP0.91□□□□□ -2.26
UBX4YMR067C DID2P69771 204 aa0.91□□□□□ -2.26
UBX4YMR067C TY2B-BQ12491 1770 aa0.91□□□□□ -2.26
UBX4YMR067C XRN1P22147 1528 aaKnown RBP0.9□□□□□ -2.26
UBX4YMR067C TVP38P36164 337 aa0.9□□□□□ -2.27
UBX4YMR067C BIG1P38813 335 aa0.9□□□□□ -2.27
UBX4YMR067C GAA1P39012 614 aa0.9□□□□□ -2.27
UBX4YMR067C DOC1P53068 250 aa0.9□□□□□ -2.27
UBX4YMR067C YMR007WQ03675 126 aa0.9□□□□□ -2.27
UBX4YMR067C TRM12Q04235 462 aa0.9□□□□□ -2.27
UBX4YMR067C BTS1Q12051 335 aa0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms