RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C PAU3P25610 124 aa6.56□□□□□ -1.36
AFG2YLR397C AGP2P38090 596 aa6.56□□□□□ -1.36
AFG2YLR397C THI2P38141 450 aa6.56□□□□□ -1.36
AFG2YLR397C SPC25P40014 221 aa6.56□□□□□ -1.36
AFG2YLR397C YLR460CP54007 376 aa6.56□□□□□ -1.36
AFG2YLR397C BUD25P85052 153 aa6.56□□□□□ -1.36
AFG2YLR397C YDR344CQ05510 147 aa6.56□□□□□ -1.36
AFG2YLR397C DIC1Q06143 298 aa6.56□□□□□ -1.36
AFG2YLR397C ISU2Q12056 156 aa6.56□□□□□ -1.36
AFG2YLR397C TRM13Q12383 476 aa6.56□□□□□ -1.36
AFG2YLR397C ISD11Q6Q560 94 aa6.56□□□□□ -1.36
AFG2YLR397C ADH1P00330 348 aaKnown RBP6.56□□□□□ -1.36
AFG2YLR397C ATS1P31386 333 aa6.56□□□□□ -1.36
AFG2YLR397C ARO4P32449 370 aaKnown RBP6.56□□□□□ -1.36
AFG2YLR397C NNK1P36003 928 aa6.56□□□□□ -1.36
AFG2YLR397C RPL14AP36105 138 aaKnown RBP6.56□□□□□ -1.36
AFG2YLR397C RPL14BP38754 138 aaKnown RBP6.56□□□□□ -1.36
AFG2YLR397C SEC72P39742 193 aaKnown RBP6.56□□□□□ -1.36
AFG2YLR397C BIT61P47041 543 aa6.56□□□□□ -1.36
AFG2YLR397C UBX6P47049 396 aa6.56□□□□□ -1.36
AFG2YLR397C YJR015WP47090 510 aa6.56□□□□□ -1.36
AFG2YLR397C UBP8P50102 471 aa6.56□□□□□ -1.36
AFG2YLR397C MTO1P53070 669 aa6.56□□□□□ -1.36
AFG2YLR397C ARR3Q06598 404 aa6.56□□□□□ -1.36
AFG2YLR397C ACK1Q07622 623 aaPredicted RBP6.56□□□□□ -1.36
AFG2YLR397C ENB1Q08299 606 aa6.56□□□□□ -1.36
AFG2YLR397C MRH1Q12117 320 aaPredicted RBP6.56□□□□□ -1.36
AFG2YLR397C ICT1Q12385 394 aa6.56□□□□□ -1.36
AFG2YLR397C TDH2P00358 332 aaKnown RBP6.55□□□□□ -1.36
AFG2YLR397C VAR1P02381 398 aa6.55□□□□□ -1.36
AFG2YLR397C ATP10P18496 279 aa6.55□□□□□ -1.36
AFG2YLR397C FLO5P38894 1075 aa6.55□□□□□ -1.36
AFG2YLR397C YJL132WP47014 750 aa6.55□□□□□ -1.36
AFG2YLR397C MTR3P48240 250 aaPredicted RBP6.55□□□□□ -1.36
AFG2YLR397C APJ1P53940 528 aa6.55□□□□□ -1.36
AFG2YLR397C UTP23Q12339 254 aaKnown RBP6.55□□□□□ -1.36
AFG2YLR397C GEP5Q12393 293 aa6.55□□□□□ -1.36
AFG2YLR397C YCR023CP25351 611 aa6.55□□□□□ -1.36
AFG2YLR397C MDH3P32419 343 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
AFG2YLR397C RML2P32611 393 aa6.55□□□□□ -1.36
AFG2YLR397C COT1P32798 439 aa6.55□□□□□ -1.36
AFG2YLR397C CBP4P37267 147 aa6.55□□□□□ -1.36
AFG2YLR397C PRM5P40476 318 aa6.55□□□□□ -1.36
AFG2YLR397C LST7P53237 242 aa6.55□□□□□ -1.36
AFG2YLR397C VHT1P53241 593 aa6.55□□□□□ -1.36
AFG2YLR397C TSA2Q04120 196 aa6.55□□□□□ -1.36
AFG2YLR397C YLR040CQ07988 224 aa6.55□□□□□ -1.36
AFG2YLR397C NRT1Q08485 598 aa6.55□□□□□ -1.36
AFG2YLR397C NDD1Q08887 554 aa6.55□□□□□ -1.36
AFG2YLR397C YLR118CQ12354 227 aa6.55□□□□□ -1.36
AFG2YLR397C TFB5Q3E7C1 72 aaPredicted RBP6.55□□□□□ -1.36
AFG2YLR397C TKL1P23254 680 aaKnown RBP6.54□□□□□ -1.36
AFG2YLR397C SCD5P34758 872 aa6.54□□□□□ -1.36
AFG2YLR397C SOR1P35497 357 aaKnown RBP6.54□□□□□ -1.36
AFG2YLR397C YMC2P38087 329 aa6.54□□□□□ -1.36
AFG2YLR397C YEL028WP39989 153 aa6.54□□□□□ -1.36
AFG2YLR397C PIC2P40035 300 aa6.54□□□□□ -1.36
AFG2YLR397C AYR1P40471 297 aa6.54□□□□□ -1.36
AFG2YLR397C GTS1P40956 396 aa6.54□□□□□ -1.36
AFG2YLR397C PFD1P46988 109 aa6.54□□□□□ -1.36
AFG2YLR397C YNL140CP53910 189 aa6.54□□□□□ -1.36
AFG2YLR397C MET31Q03081 177 aa6.54□□□□□ -1.36
AFG2YLR397C SOR2Q07786 357 aa6.54□□□□□ -1.36
AFG2YLR397C PAM18Q07914 168 aa6.54□□□□□ -1.36
AFG2YLR397C BSC1Q12140 328 aa6.54□□□□□ -1.36
AFG2YLR397C YPR015CQ12531 247 aa6.54□□□□□ -1.36
AFG2YLR397C POR1P04840 283 aaKnown RBP6.54□□□□□ -1.36
AFG2YLR397C YFL068WP0CX99 160 aa6.54□□□□□ -1.36
AFG2YLR397C YLL066W-AP0CY00 160 aa6.54□□□□□ -1.36
AFG2YLR397C YLL067W-AP0CY01 160 aa6.54□□□□□ -1.36
AFG2YLR397C ANB1P19211 157 aa6.54□□□□□ -1.36
AFG2YLR397C ADK2P26364 225 aa6.54□□□□□ -1.36
AFG2YLR397C YKL187CP34231 750 aa6.54□□□□□ -1.36
AFG2YLR397C PAU24P38155 120 aa6.54□□□□□ -1.36
AFG2YLR397C ERG28P40030 148 aa6.54□□□□□ -1.36
AFG2YLR397C COX18P53239 316 aa6.54□□□□□ -1.36
AFG2YLR397C NCE103P53615 221 aa6.54□□□□□ -1.36
AFG2YLR397C BIO5P53744 561 aaKnown RBP6.54□□□□□ -1.36
AFG2YLR397C GAS5Q08193 484 aa6.54□□□□□ -1.36
AFG2YLR397C YLR146W-AQ2V2P1 62 aa6.54□□□□□ -1.36
AFG2YLR397C HTA1P04911 132 aaKnown RBP6.53□□□□□ -1.36
AFG2YLR397C HEM2P05373 342 aa6.53□□□□□ -1.36
AFG2YLR397C TIR2P33890 251 aa6.53□□□□□ -1.36
AFG2YLR397C HSP10P38910 106 aa6.53□□□□□ -1.36
AFG2YLR397C PSD1P39006 500 aa6.53□□□□□ -1.36
AFG2YLR397C YEA6P39953 335 aa6.53□□□□□ -1.36
AFG2YLR397C IRC22P40006 225 aa6.53□□□□□ -1.36
AFG2YLR397C PAU5P43575 122 aa6.53□□□□□ -1.36
AFG2YLR397C ATG27P46989 271 aa6.53□□□□□ -1.36
AFG2YLR397C YMR210WQ03649 449 aa6.53□□□□□ -1.36
AFG2YLR397C ARA2Q04212 335 aa6.53□□□□□ -1.36
AFG2YLR397C YLR456WQ06199 204 aa6.53□□□□□ -1.36
AFG2YLR397C TFS1P14306 219 aa6.53□□□□□ -1.36
AFG2YLR397C DRE2P36152 348 aa6.53□□□□□ -1.36
AFG2YLR397C YND1P40009 630 aa6.53□□□□□ -1.36
AFG2YLR397C AIR1P40507 360 aaKnown RBP6.53□□□□□ -1.36
AFG2YLR397C IKS1P47042 667 aa6.53□□□□□ -1.36
AFG2YLR397C TIS11P47977 285 aa6.53□□□□□ -1.36
AFG2YLR397C YGL262WP53054 175 aa6.53□□□□□ -1.36
AFG2YLR397C TMA23Q03525 211 aa6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms