RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeastyeast

Gene YPT6, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT6YLR262C MRPL50P53724 139 aa1.43□□□□□ -2.18
YPT6YLR262C YNR062CP53748 327 aa1.43□□□□□ -2.18
YPT6YLR262C NUP49Q02199 472 aa1.43□□□□□ -2.18
YPT6YLR262C TRM12Q04235 462 aa1.43□□□□□ -2.18
YPT6YLR262C SML1Q04964 104 aa1.43□□□□□ -2.18
YPT6YLR262C CDC8P00572 216 aa1.42□□□□□ -2.18
YPT6YLR262C LDB7P38210 180 aa1.42□□□□□ -2.18
YPT6YLR262C RPL33BP41056 107 aaKnown RBP1.42□□□□□ -2.18
YPT6YLR262C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
YPT6YLR262C CFT1Q06632 1357 aaKnown RBP1.42□□□□□ -2.18
YPT6YLR262C UBR2Q07963 1872 aa1.41□□□□□ -2.18
YPT6YLR262C PEX17P40155 199 aa1.41□□□□□ -2.18
YPT6YLR262C TOS8P53147 276 aa1.41□□□□□ -2.18
YPT6YLR262C YJR149WP47177 404 aa1.4□□□□□ -2.19
YPT6YLR262C YLR162WQ06235 118 aa1.4□□□□□ -2.19
YPT6YLR262C YGL010WP25338 174 aa1.39□□□□□ -2.19
YPT6YLR262C NSA1P53136 463 aaPredicted RBP1.39□□□□□ -2.19
YPT6YLR262C BUD25P85052 153 aa1.39□□□□□ -2.19
YPT6YLR262C TPO4Q12256 659 aa1.39□□□□□ -2.19
YPT6YLR262C RPL2AP0CX45 254 aaKnown RBP1.38□□□□□ -2.19
YPT6YLR262C RPL2BP0CX46 254 aaKnown RBP1.38□□□□□ -2.19
YPT6YLR262C MATALPHA1P0CY06 175 aa1.38□□□□□ -2.19
YPT6YLR262C HMLALPHA1P0CY07 175 aa1.38□□□□□ -2.19
YPT6YLR262C MRPL25P23369 157 aa1.38□□□□□ -2.19
YPT6YLR262C YBR220CP38318 560 aa1.38□□□□□ -2.19
YPT6YLR262C AIF1P52923 378 aa1.38□□□□□ -2.19
YPT6YLR262C BOL2P53082 120 aa1.38□□□□□ -2.19
YPT6YLR262C MED4Q12343 284 aa1.38□□□□□ -2.19
YPT6YLR262C FPR1P20081 114 aaKnown RBP1.37□□□□□ -2.19
YPT6YLR262C CDC10P25342 322 aaKnown RBP1.37□□□□□ -2.19
YPT6YLR262C MEI4P29467 408 aa1.37□□□□□ -2.19
YPT6YLR262C MSN4P33749 630 aa1.37□□□□□ -2.19
YPT6YLR262C CUE1P38428 203 aa1.37□□□□□ -2.19
YPT6YLR262C SVP26P38869 228 aa1.37□□□□□ -2.19
YPT6YLR262C PGD1P40356 397 aa1.37□□□□□ -2.19
YPT6YLR262C TIR3P40552 269 aa1.37□□□□□ -2.19
YPT6YLR262C ABF2Q02486 183 aa1.37□□□□□ -2.19
YPT6YLR262C PET117Q02771 107 aa1.37□□□□□ -2.19
YPT6YLR262C SRL4Q03085 281 aa1.37□□□□□ -2.19
YPT6YLR262C YMD8Q03697 442 aa1.37□□□□□ -2.19
YPT6YLR262C KRE28Q04431 385 aa1.37□□□□□ -2.19
YPT6YLR262C DRS2P39524 1355 aa1.36□□□□□ -2.19
YPT6YLR262C SRB4P32569 687 aa1.36□□□□□ -2.19
YPT6YLR262C NTF2P33331 125 aaKnown RBP1.36□□□□□ -2.19
YPT6YLR262C MCM22P47167 239 aa1.36□□□□□ -2.19
YPT6YLR262C PSF1Q12488 208 aa1.36□□□□□ -2.19
YPT6YLR262C RPL27BP0C2H7 136 aaKnown RBP1.35□□□□□ -2.19
YPT6YLR262C RPO26P20435 155 aa1.35□□□□□ -2.19
YPT6YLR262C YCR016WP25617 290 aaKnown RBP1.35□□□□□ -2.19
YPT6YLR262C FZF1P32805 299 aa1.35□□□□□ -2.19
YPT6YLR262C IRC22P40006 225 aa1.35□□□□□ -2.19
YPT6YLR262C YRB2P40517 327 aa1.35□□□□□ -2.19
YPT6YLR262C YNR077CP53758 84 aa1.35□□□□□ -2.19
YPT6YLR262C DOG2P38773 246 aa1.34□□□□□ -2.19
YPT6YLR262C FMC1P40491 155 aa1.34□□□□□ -2.19
YPT6YLR262C ICE2P40499 491 aa1.34□□□□□ -2.19
YPT6YLR262C RRN5Q02983 363 aa1.34□□□□□ -2.19
YPT6YLR262C LPP1Q04396 274 aa1.34□□□□□ -2.19
YPT6YLR262C BCY1P07278 416 aaKnown RBP1.33□□□□□ -2.2
YPT6YLR262C ATG22P25568 528 aa1.33□□□□□ -2.2
YPT6YLR262C URA8P38627 578 aaPredicted RBP1.33□□□□□ -2.2
YPT6YLR262C YNL217WP40152 326 aa1.33□□□□□ -2.2
YPT6YLR262C RPL13BP40212 199 aaKnown RBP1.33□□□□□ -2.2
YPT6YLR262C RPL13AQ12690 199 aaPredicted RBP1.33□□□□□ -2.2
YPT6YLR262C PDR18P53756 1333 aa1.33□□□□□ -2.2
YPT6YLR262C MET5P47169 1442 aa1.32□□□□□ -2.2
YPT6YLR262C REP2P03872 296 aa1.32□□□□□ -2.2
YPT6YLR262C YLR156WP0CE96 114 aa1.32□□□□□ -2.2
YPT6YLR262C YLR159WP0CE97 114 aa1.32□□□□□ -2.2
YPT6YLR262C YLR161WP0CE98 114 aa1.32□□□□□ -2.2
YPT6YLR262C SRY1P36007 326 aa1.32□□□□□ -2.2
YPT6YLR262C VPS21P36017 210 aaKnown RBP1.32□□□□□ -2.2
YPT6YLR262C RSM25P40496 264 aa1.32□□□□□ -2.2
YPT6YLR262C NUP84P52891 726 aa1.32□□□□□ -2.2
YPT6YLR262C YNL010WP53981 241 aaKnown RBP1.32□□□□□ -2.2
YPT6YLR262C SNZ1Q03148 297 aa1.32□□□□□ -2.2
YPT6YLR262C QCR8P08525 94 aa1.31□□□□□ -2.2
YPT6YLR262C MRPS28P21771 286 aa1.31□□□□□ -2.2
YPT6YLR262C NOP13P53883 403 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
YPT6YLR262C MZM1Q03429 123 aaPredicted RBP1.31□□□□□ -2.2
YPT6YLR262C GAS3Q03655 524 aa1.31□□□□□ -2.2
YPT6YLR262C CDC28P00546 298 aaKnown RBP1.3□□□□□ -2.2
YPT6YLR262C RHO1P06780 209 aaKnown RBP1.3□□□□□ -2.2
YPT6YLR262C URA6P15700 204 aa1.3□□□□□ -2.2
YPT6YLR262C UPS2P35200 230 aa1.3□□□□□ -2.2
YPT6YLR262C LIA1P47120 325 aaKnown RBP1.3□□□□□ -2.2
YPT6YLR262C ALG13P53178 202 aa1.3□□□□□ -2.2
YPT6YLR262C TUS1Q06412 1307 aa1.3□□□□□ -2.2
YPT6YLR262C YIL177CP40434 1758 aa1.29□□□□□ -2.2
YPT6YLR262C YJL225CP40889 1758 aa1.29□□□□□ -2.2
YPT6YLR262C CYR1P08678 2026 aaKnown RBP1.29□□□□□ -2.2
YPT6YLR262C GPA2P10823 449 aa1.29□□□□□ -2.2
YPT6YLR262C POP4P38336 279 aa1.29□□□□□ -2.2
YPT6YLR262C MIC12P38341 106 aa1.29□□□□□ -2.2
YPT6YLR262C GAA1P39012 614 aa1.29□□□□□ -2.2
YPT6YLR262C EAF6P47128 113 aa1.29□□□□□ -2.2
YPT6YLR262C DOC1P53068 250 aa1.29□□□□□ -2.2
YPT6YLR262C CDC123Q05791 360 aa1.29□□□□□ -2.2
YPT6YLR262C LSO2Q3E772 92 aaKnown RBP1.29□□□□□ -2.2
YPT6YLR262C TDA8Q6B2U8 126 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms