RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C HNT1Q04344 158 aaKnown RBP3.9□□□□□ -1.79
CDC42YLR229C RBS1Q05672 457 aaKnown RBP3.9□□□□□ -1.79
CDC42YLR229C YPR174CQ06616 221 aaPredicted RBP3.9□□□□□ -1.79
CDC42YLR229C FYV7Q12247 151 aa3.9□□□□□ -1.79
CDC42YLR229C YJR112W-AQ3E743 109 aa3.9□□□□□ -1.79
CDC42YLR229C YMR084WA2P2R3 262 aa3.89□□□□□ -1.79
CDC42YLR229C MATALPHA1P0CY06 175 aa3.89□□□□□ -1.79
CDC42YLR229C HMLALPHA1P0CY07 175 aa3.89□□□□□ -1.79
CDC42YLR229C GPI12P23797 304 aa3.89□□□□□ -1.79
CDC42YLR229C MXR2P25566 168 aa3.89□□□□□ -1.79
CDC42YLR229C STP22P25604 385 aa3.89□□□□□ -1.79
CDC42YLR229C TIP1P27654 210 aaPredicted RBP3.89□□□□□ -1.79
CDC42YLR229C CWP1P28319 239 aa3.89□□□□□ -1.79
CDC42YLR229C TRR1P29509 319 aaKnown RBP3.89□□□□□ -1.79
CDC42YLR229C DBF20P32328 564 aa3.89□□□□□ -1.79
CDC42YLR229C ACP1P32463 125 aa3.89□□□□□ -1.79
CDC42YLR229C SCM4P32564 187 aa3.89□□□□□ -1.79
CDC42YLR229C SPT10P35208 640 aa3.89□□□□□ -1.79
CDC42YLR229C YNK1P36010 153 aaKnown RBP3.89□□□□□ -1.79
CDC42YLR229C MIA40P36046 403 aa3.89□□□□□ -1.79
CDC42YLR229C MRPL27P36526 146 aaPredicted RBP3.89□□□□□ -1.79
CDC42YLR229C SDS24P38314 527 aa3.89□□□□□ -1.79
CDC42YLR229C DLS1P40366 167 aa3.89□□□□□ -1.79
CDC42YLR229C POP1P41812 875 aa3.89□□□□□ -1.79
CDC42YLR229C PAM16P42949 149 aa3.89□□□□□ -1.79
CDC42YLR229C YJR056CP47115 236 aa3.89□□□□□ -1.79
CDC42YLR229C DAN1P47178 298 aa3.89□□□□□ -1.79
CDC42YLR229C SEH1P53011 349 aaKnown RBP3.89□□□□□ -1.79
CDC42YLR229C YGR042WP53227 271 aa3.89□□□□□ -1.79
CDC42YLR229C HCH1P53834 153 aa3.89□□□□□ -1.79
CDC42YLR229C NCE101Q02820 53 aa3.89□□□□□ -1.79
CDC42YLR229C TMA23Q03525 211 aa3.89□□□□□ -1.79
CDC42YLR229C CUE4Q04201 117 aaPredicted RBP3.89□□□□□ -1.79
CDC42YLR229C DIC1Q06143 298 aa3.89□□□□□ -1.79
CDC42YLR229C MRX9Q07349 420 aaKnown RBP3.89□□□□□ -1.79
CDC42YLR229C VAM3Q12241 283 aa3.89□□□□□ -1.79
CDC42YLR229C PRS5Q12265 496 aaKnown RBP3.89□□□□□ -1.79
CDC42YLR229C YPR145C-AQ2V2P0 78 aa3.89□□□□□ -1.79
CDC42YLR229C YIL002W-AQ3E7Z5 69 aa3.89□□□□□ -1.79
CDC42YLR229C YCL001W-BQ96VH2 84 aa3.89□□□□□ -1.79
CDC42YLR229C PET20Q99373 253 aa3.89□□□□□ -1.79
CDC42YLR229C FAB1P34756 2278 aa3.89□□□□□ -1.79
CDC42YLR229C CDC28P00546 298 aaKnown RBP3.88□□□□□ -1.79
CDC42YLR229C RPL20AP0CX23 172 aaKnown RBP3.88□□□□□ -1.79
CDC42YLR229C RPL20BP0CX24 172 aaPredicted RBP3.88□□□□□ -1.79
CDC42YLR229C RPL1AP0CX43 217 aaKnown RBP3.88□□□□□ -1.79
CDC42YLR229C RPL1BP0CX44 217 aaKnown RBP3.88□□□□□ -1.79
CDC42YLR229C ADH7P25377 361 aa3.88□□□□□ -1.79
CDC42YLR229C POP5P28005 173 aa3.88□□□□□ -1.79
CDC42YLR229C LAC1P28496 418 aa3.88□□□□□ -1.79
CDC42YLR229C PRE2P30656 287 aaKnown RBP3.88□□□□□ -1.79
CDC42YLR229C AFG1P32317 509 aa3.88□□□□□ -1.79
CDC42YLR229C GPX1P36014 167 aa3.88□□□□□ -1.79
CDC42YLR229C MRPS9P38120 278 aa3.88□□□□□ -1.79
CDC42YLR229C IRC22P40006 225 aa3.88□□□□□ -1.79
CDC42YLR229C SLZ1P40167 298 aa3.88□□□□□ -1.79
CDC42YLR229C YIL152WP40455 235 aa3.88□□□□□ -1.79
CDC42YLR229C FLX1P40464 311 aa3.88□□□□□ -1.79
CDC42YLR229C YIL086CP40503 102 aa3.88□□□□□ -1.79
CDC42YLR229C CFD1P40558 293 aa3.88□□□□□ -1.79
CDC42YLR229C YHC3P47040 408 aa3.88□□□□□ -1.79
CDC42YLR229C YGL262WP53054 175 aa3.88□□□□□ -1.79
CDC42YLR229C NSA1P53136 463 aaPredicted RBP3.88□□□□□ -1.79
CDC42YLR229C SCW4P53334 386 aaKnown RBP3.88□□□□□ -1.79
CDC42YLR229C MPA43P53583 542 aaPredicted RBP3.88□□□□□ -1.79
CDC42YLR229C YIF1P53845 314 aaKnown RBP3.88□□□□□ -1.79
CDC42YLR229C MRPL51Q06090 140 aaPredicted RBP3.88□□□□□ -1.79
CDC42YLR229C YLR456WQ06199 204 aa3.88□□□□□ -1.79
CDC42YLR229C TAZ1Q06510 381 aa3.88□□□□□ -1.79
CDC42YLR229C HEM25Q07534 307 aa3.88□□□□□ -1.79
CDC42YLR229C BSC6Q08280 497 aa3.88□□□□□ -1.79
CDC42YLR229C HMS1Q12398 434 aa3.88□□□□□ -1.79
CDC42YLR229C COX19Q3E731 98 aa3.88□□□□□ -1.79
CDC42YLR229C ODC2Q99297 307 aa3.88□□□□□ -1.79
CDC42YLR229C TPI1P00942 248 aaKnown RBP3.87□□□□□ -1.79
CDC42YLR229C YSF3P0C074 85 aaPredicted RBP3.87□□□□□ -1.79
CDC42YLR229C FUN14P18411 198 aa3.87□□□□□ -1.79
CDC42YLR229C STE4P18851 423 aa3.87□□□□□ -1.79
CDC42YLR229C VMA16P23968 213 aa3.87□□□□□ -1.79
CDC42YLR229C TRS65P32893 560 aa3.87□□□□□ -1.79
CDC42YLR229C SNC2P33328 115 aa3.87□□□□□ -1.79
CDC42YLR229C SLC1P33333 303 aa3.87□□□□□ -1.79
CDC42YLR229C YKL075CP36083 450 aa3.87□□□□□ -1.79
CDC42YLR229C YKL071WP36086 256 aa3.87□□□□□ -1.79
CDC42YLR229C RTS2P40962 232 aa3.87□□□□□ -1.79
CDC42YLR229C GLC8P41818 229 aa3.87□□□□□ -1.79
CDC42YLR229C OTU1P43558 301 aa3.87□□□□□ -1.79
CDC42YLR229C RPA34P47006 233 aaPredicted RBP3.87□□□□□ -1.79
CDC42YLR229C GPI14P47088 403 aaKnown RBP3.87□□□□□ -1.79
CDC42YLR229C LYS20P48570 428 aaKnown RBP3.87□□□□□ -1.79
CDC42YLR229C TRM9P49957 279 aa3.87□□□□□ -1.79
CDC42YLR229C YGL185CP53100 379 aa3.87□□□□□ -1.79
CDC42YLR229C YNR066CP53752 436 aa3.87□□□□□ -1.79
CDC42YLR229C YLR460CP54007 376 aa3.87□□□□□ -1.79
CDC42YLR229C MOT3P54785 490 aaKnown RBP3.87□□□□□ -1.79
CDC42YLR229C YML018CQ03730 393 aa3.87□□□□□ -1.79
CDC42YLR229C AVO2Q04749 426 aa3.87□□□□□ -1.79
CDC42YLR229C ERP1Q05359 219 aaKnown RBP3.87□□□□□ -1.79
CDC42YLR229C ARR2Q06597 130 aa3.87□□□□□ -1.79
CDC42YLR229C SRL2Q12020 392 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms