RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C TOK1P40310 691 aa9.75□□□□□ -0.85
SPT8YLR055C CUP9P41817 306 aa9.75□□□□□ -0.85
SPT8YLR055C PUS4P48567 403 aaKnown RBP9.75□□□□□ -0.85
SPT8YLR055C RMD9P53140 646 aaKnown RBP9.75□□□□□ -0.85
SPT8YLR055C AKR2Q12013 749 aa9.75□□□□□ -0.85
SPT8YLR055C RPL13AQ12690 199 aaPredicted RBP9.75□□□□□ -0.85
SPT8YLR055C KRR1P25586 316 aaPredicted RBP9.74□□□□□ -0.85
SPT8YLR055C LDB16P25587 256 aa9.74□□□□□ -0.85
SPT8YLR055C OM14P38325 134 aa9.74□□□□□ -0.85
SPT8YLR055C AIR1P40507 360 aaKnown RBP9.74□□□□□ -0.85
SPT8YLR055C YFR054CP43622 192 aa9.74□□□□□ -0.85
SPT8YLR055C AVT4P50944 713 aa9.74□□□□□ -0.85
SPT8YLR055C DFG5Q05031 458 aa9.74□□□□□ -0.85
SPT8YLR055C PML1Q07930 204 aaPredicted RBP9.74□□□□□ -0.85
SPT8YLR055C AGA2P32781 87 aa9.73□□□□□ -0.85
SPT8YLR055C FRM2P37261 193 aa9.73□□□□□ -0.85
SPT8YLR055C ARC40P38328 384 aaKnown RBP9.73□□□□□ -0.85
SPT8YLR055C VPS28Q02767 242 aa9.73□□□□□ -0.85
SPT8YLR055C YDR415CQ04033 374 aaPredicted RBP9.73□□□□□ -0.85
SPT8YLR055C YOR343CQ12484 108 aa9.73□□□□□ -0.85
SPT8YLR055C ACP1P32463 125 aa9.72□□□□□ -0.85
SPT8YLR055C YEA4P40004 342 aa9.72□□□□□ -0.85
SPT8YLR055C LSM4P40070 187 aaKnown RBP9.72□□□□□ -0.85
SPT8YLR055C PAU15P40585 124 aa9.72□□□□□ -0.85
SPT8YLR055C ERV14P53173 138 aa9.72□□□□□ -0.85
SPT8YLR055C SAM50P53969 484 aa9.72□□□□□ -0.85
SPT8YLR055C GMC1Q04399 608 aa9.72□□□□□ -0.85
SPT8YLR055C YOR015WQ12169 119 aa9.72□□□□□ -0.85
SPT8YLR055C DCN1Q12395 269 aa9.72□□□□□ -0.85
SPT8YLR055C PRP46Q12417 451 aaPredicted RBP9.72□□□□□ -0.85
SPT8YLR055C AIM45Q12480 344 aaKnown RBP9.72□□□□□ -0.85
SPT8YLR055C UBA3Q99344 299 aa9.72□□□□□ -0.85
SPT8YLR055C DAT1P13483 248 aaKnown RBP9.72□□□□□ -0.85
SPT8YLR055C LAC1P28496 418 aa9.72□□□□□ -0.85
SPT8YLR055C IKS1P47042 667 aa9.72□□□□□ -0.85
SPT8YLR055C RNH201P53942 307 aa9.72□□□□□ -0.85
SPT8YLR055C THI74Q04083 370 aa9.72□□□□□ -0.85
SPT8YLR055C YPL278CQ08990 100 aa9.72□□□□□ -0.85
SPT8YLR055C MET3P08536 511 aa9.71□□□□□ -0.85
SPT8YLR055C RFA3P26755 122 aaKnown RBP9.71□□□□□ -0.85
SPT8YLR055C SOL3P38858 249 aa9.71□□□□□ -0.85
SPT8YLR055C GET2P40056 285 aa9.71□□□□□ -0.85
SPT8YLR055C YGL114WP53134 725 aa9.71□□□□□ -0.85
SPT8YLR055C BSC5P53755 489 aa9.71□□□□□ -0.85
SPT8YLR055C TEX1P53851 422 aaKnown RBP9.71□□□□□ -0.85
SPT8YLR055C OCA2P53949 197 aa9.71□□□□□ -0.85
SPT8YLR055C YLR460CP54007 376 aa9.71□□□□□ -0.85
SPT8YLR055C ARR2Q06597 130 aa9.71□□□□□ -0.85
SPT8YLR055C MRS4P23500 304 aa9.7□□□□□ -0.86
SPT8YLR055C MIR1P23641 311 aaKnown RBP9.7□□□□□ -0.86
SPT8YLR055C POP5P28005 173 aa9.7□□□□□ -0.86
SPT8YLR055C YPT31P38555 223 aaKnown RBP9.7□□□□□ -0.86
SPT8YLR055C GPP1P41277 250 aaKnown RBP9.7□□□□□ -0.86
SPT8YLR055C SEH1P53011 349 aaKnown RBP9.7□□□□□ -0.86
SPT8YLR055C YGL185CP53100 379 aa9.7□□□□□ -0.86
SPT8YLR055C NUP53Q03790 475 aa9.7□□□□□ -0.86
SPT8YLR055C AGE1Q04412 482 aa9.7□□□□□ -0.86
SPT8YLR055C SEN15Q04675 128 aa9.7□□□□□ -0.86
SPT8YLR055C HOF1Q05080 669 aa9.7□□□□□ -0.86
SPT8YLR055C ASM4Q05166 528 aa9.7□□□□□ -0.86
SPT8YLR055C PAR32Q12515 295 aaKnown RBP9.7□□□□□ -0.86
SPT8YLR055C GDH1P07262 454 aaKnown RBP9.7□□□□□ -0.86
SPT8YLR055C YCR101CP25607 182 aa9.7□□□□□ -0.86
SPT8YLR055C SCM4P32564 187 aa9.7□□□□□ -0.86
SPT8YLR055C MRX9Q07349 420 aaKnown RBP9.7□□□□□ -0.86
SPT8YLR055C MIM1Q08176 113 aa9.7□□□□□ -0.86
SPT8YLR055C GLT1Q12680 2145 aaKnown RBP9.7□□□□□ -0.86
SPT8YLR055C AIM3P38266 947 aaKnown RBP9.69□□□□□ -0.86
SPT8YLR055C FLX1P40464 311 aa9.69□□□□□ -0.86
SPT8YLR055C YJR011CP47086 261 aaPredicted RBP9.69□□□□□ -0.86
SPT8YLR055C BNS1P50084 137 aa9.69□□□□□ -0.86
SPT8YLR055C YOR376WQ08900 122 aa9.69□□□□□ -0.86
SPT8YLR055C HAA1Q12753 694 aaKnown RBP9.69□□□□□ -0.86
SPT8YLR055C MSW1P04803 379 aa9.68□□□□□ -0.86
SPT8YLR055C SHR5P41912 237 aa9.68□□□□□ -0.86
SPT8YLR055C MGA1P53050 456 aa9.68□□□□□ -0.86
SPT8YLR055C YGL262WP53054 175 aa9.68□□□□□ -0.86
SPT8YLR055C YAP1802P53309 568 aa9.68□□□□□ -0.86
SPT8YLR055C YNR066CP53752 436 aa9.68□□□□□ -0.86
SPT8YLR055C CUZ1P53899 274 aa9.68□□□□□ -0.86
SPT8YLR055C MRPL28P36527 147 aa9.68□□□□□ -0.86
SPT8YLR055C PAL1Q05518 499 aaKnown RBP9.68□□□□□ -0.86
SPT8YLR055C IRC19Q07843 230 aa9.68□□□□□ -0.86
SPT8YLR055C MED7Q08278 222 aa9.68□□□□□ -0.86
SPT8YLR055C YLR118CQ12354 227 aa9.68□□□□□ -0.86
SPT8YLR055C CBP6P07253 162 aaPredicted RBP9.67□□□□□ -0.86
SPT8YLR055C AIM17P23180 465 aaKnown RBP9.67□□□□□ -0.86
SPT8YLR055C EMP70P32802 667 aa9.67□□□□□ -0.86
SPT8YLR055C FIG1P38224 298 aa9.67□□□□□ -0.86
SPT8YLR055C YBR292CP38357 123 aa9.67□□□□□ -0.86
SPT8YLR055C STS1P38637 319 aa9.67□□□□□ -0.86
SPT8YLR055C YJL193WP39542 402 aa9.67□□□□□ -0.86
SPT8YLR055C IRC24P40580 263 aa9.67□□□□□ -0.86
SPT8YLR055C YMR265CQ03508 461 aaKnown RBP9.67□□□□□ -0.86
SPT8YLR055C CTR3Q06686 241 aa9.67□□□□□ -0.86
SPT8YLR055C RPP2BP02400 110 aaKnown RBP9.66□□□□□ -0.86
SPT8YLR055C SEF1P34228 1148 aa9.66□□□□□ -0.86
SPT8YLR055C RHO5P53879 331 aaKnown RBP9.66□□□□□ -0.86
SPT8YLR055C HMS1Q12398 434 aa9.66□□□□□ -0.86
SPT8YLR055C ARF1P11076 181 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 75 ms