RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C MAL12P53341 584 aa2.49□□□□□ -2.01
SED5YLR026C BOP2Q06150 570 aa2.49□□□□□ -2.01
SED5YLR026C PRR2Q12310 699 aa2.49□□□□□ -2.01
SED5YLR026C PET494P07390 489 aaPredicted RBP2.48□□□□□ -2.01
SED5YLR026C RPL10P41805 221 aaKnown RBP2.48□□□□□ -2.01
SED5YLR026C YFL064CP43540 174 aa2.48□□□□□ -2.01
SED5YLR026C PIR5P46999 287 aa2.48□□□□□ -2.01
SED5YLR026C SSU72P53538 206 aaPredicted RBP2.48□□□□□ -2.01
SED5YLR026C ALG9P53868 555 aaKnown RBP2.48□□□□□ -2.01
SED5YLR026C YPL077CQ02831 240 aa2.48□□□□□ -2.01
SED5YLR026C VBA1Q04301 562 aa2.48□□□□□ -2.01
SED5YLR026C YLR413WQ06689 675 aa2.48□□□□□ -2.01
SED5YLR026C YOR032W-AQ8TGS1 66 aa2.48□□□□□ -2.01
SED5YLR026C QCR6P00127 147 aa2.47□□□□□ -2.01
SED5YLR026C YFR010W-AP0C5N0 62 aa2.47□□□□□ -2.01
SED5YLR026C UBC6P33296 250 aaPredicted RBP2.47□□□□□ -2.01
SED5YLR026C GRE3P38715 327 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SED5YLR026C ICE2P40499 491 aa2.47□□□□□ -2.01
SED5YLR026C YJR141WP47172 347 aaPredicted RBP2.47□□□□□ -2.01
SED5YLR026C YJR149WP47177 404 aa2.47□□□□□ -2.01
SED5YLR026C RAD17P48581 401 aa2.47□□□□□ -2.01
SED5YLR026C MIX14Q04341 121 aa2.47□□□□□ -2.01
SED5YLR026C BER1Q06688 274 aaKnown RBP2.47□□□□□ -2.01
SED5YLR026C FLO9P39712 1322 aa2.46□□□□□ -2.02
SED5YLR026C RPC40P07703 335 aaKnown RBP2.46□□□□□ -2.02
SED5YLR026C YSF3P0C074 85 aaPredicted RBP2.46□□□□□ -2.02
SED5YLR026C RSR1P13856 272 aa2.46□□□□□ -2.02
SED5YLR026C TFS1P14306 219 aa2.46□□□□□ -2.02
SED5YLR026C IMP1P28627 190 aa2.46□□□□□ -2.02
SED5YLR026C SUI1P32911 108 aaKnown RBP2.46□□□□□ -2.02
SED5YLR026C SPT4P32914 102 aaPredicted RBP2.46□□□□□ -2.02
SED5YLR026C RPT5P33297 434 aaKnown RBP2.46□□□□□ -2.02
SED5YLR026C RIB7P33312 244 aa2.46□□□□□ -2.02
SED5YLR026C YMR144WP40214 342 aaKnown RBP2.46□□□□□ -2.02
SED5YLR026C KAP114P53067 1004 aa2.46□□□□□ -2.02
SED5YLR026C YML018CQ03730 393 aa2.46□□□□□ -2.02
SED5YLR026C DPP1Q05521 289 aa2.46□□□□□ -2.02
SED5YLR026C ASR1Q06834 288 aa2.46□□□□□ -2.02
SED5YLR026C RDS3Q06835 107 aaPredicted RBP2.46□□□□□ -2.02
SED5YLR026C PST1Q12355 444 aa2.46□□□□□ -2.02
SED5YLR026C GEP5Q12393 293 aa2.46□□□□□ -2.02
SED5YLR026C YPR064WQ12492 139 aa2.46□□□□□ -2.02
SED5YLR026C Q0297Q9ZZV8 51 aa2.46□□□□□ -2.02
SED5YLR026C Q0144Q9ZZW2 109 aa2.46□□□□□ -2.02
SED5YLR026C RAD10P06838 210 aa2.45□□□□□ -2.02
SED5YLR026C IFM1P25038 676 aa2.45□□□□□ -2.02
SED5YLR026C SUA5P32579 426 aa2.45□□□□□ -2.02
SED5YLR026C HYR1P40581 163 aaKnown RBP2.45□□□□□ -2.02
SED5YLR026C EMC2P47133 292 aaKnown RBP2.45□□□□□ -2.02
SED5YLR026C MDM34P53083 459 aa2.45□□□□□ -2.02
SED5YLR026C LSM3P57743 89 aaKnown RBP2.45□□□□□ -2.02
SED5YLR026C SDC1Q03323 175 aa2.45□□□□□ -2.02
SED5YLR026C CGI121Q03705 181 aaKnown RBP2.45□□□□□ -2.02
SED5YLR026C YDR278CQ05612 105 aa2.45□□□□□ -2.02
SED5YLR026C NNT1Q05874 261 aa2.45□□□□□ -2.02
SED5YLR026C ARV1Q06541 321 aa2.45□□□□□ -2.02
SED5YLR026C RRP40Q08285 240 aaKnown RBP2.45□□□□□ -2.02
SED5YLR026C YPR011CQ12251 326 aa2.45□□□□□ -2.02
SED5YLR026C URA2P07259 2214 aaKnown RBP2.44□□□□□ -2.02
SED5YLR026C CCW14O13547 238 aa2.44□□□□□ -2.02
SED5YLR026C YLR462WO13556 202 aa2.44□□□□□ -2.02
SED5YLR026C HIS3P06633 220 aa2.44□□□□□ -2.02
SED5YLR026C COS2P0CX12 379 aa2.44□□□□□ -2.02
SED5YLR026C COS3P0CX13 379 aa2.44□□□□□ -2.02
SED5YLR026C CSM1P25651 190 aa2.44□□□□□ -2.02
SED5YLR026C MRPL3P36516 390 aa2.44□□□□□ -2.02
SED5YLR026C PRS3P38689 320 aaKnown RBP2.44□□□□□ -2.02
SED5YLR026C YHL049CP38722 271 aa2.44□□□□□ -2.02
SED5YLR026C PEX18P38855 283 aa2.44□□□□□ -2.02
SED5YLR026C NPT1P39683 429 aaKnown RBP2.44□□□□□ -2.02
SED5YLR026C RTT105P40063 208 aa2.44□□□□□ -2.02
SED5YLR026C AVT7P40501 490 aa2.44□□□□□ -2.02
SED5YLR026C APQ12P40532 138 aa2.44□□□□□ -2.02
SED5YLR026C YAR1P46683 200 aa2.44□□□□□ -2.02
SED5YLR026C YPR174CQ06616 221 aaPredicted RBP2.44□□□□□ -2.02
SED5YLR026C RRP42Q12277 265 aaPredicted RBP2.44□□□□□ -2.02
SED5YLR026C COX2P00410 251 aa2.43□□□□□ -2.02
SED5YLR026C CDC36P06100 191 aaPredicted RBP2.43□□□□□ -2.02
SED5YLR026C YKL063CP35725 167 aa2.43□□□□□ -2.02
SED5YLR026C VPS51P36116 164 aa2.43□□□□□ -2.02
SED5YLR026C HSM3P38348 480 aa2.43□□□□□ -2.02
SED5YLR026C VPS60Q03390 229 aa2.43□□□□□ -2.02
SED5YLR026C SLD7Q08457 257 aa2.43□□□□□ -2.02
SED5YLR026C POM33Q12164 279 aa2.43□□□□□ -2.02
SED5YLR026C ATG5Q12380 294 aa2.43□□□□□ -2.02
SED5YLR026C YIL002W-AQ3E7Z5 69 aa2.43□□□□□ -2.02
SED5YLR026C PHO80P20052 293 aa2.42□□□□□ -2.02
SED5YLR026C POF1P25576 258 aa2.42□□□□□ -2.02
SED5YLR026C EHD3P28817 500 aa2.42□□□□□ -2.02
SED5YLR026C SRB4P32569 687 aa2.42□□□□□ -2.02
SED5YLR026C ARN2P38724 620 aa2.42□□□□□ -2.02
SED5YLR026C SOK1P40317 901 aa2.42□□□□□ -2.02
SED5YLR026C YRB1P41920 201 aaKnown RBP2.42□□□□□ -2.02
SED5YLR026C RPE1P46969 238 aa2.42□□□□□ -2.02
SED5YLR026C DSK2P48510 373 aa2.42□□□□□ -2.02
SED5YLR026C BOL2P53082 120 aa2.42□□□□□ -2.02
SED5YLR026C FMP41P53889 259 aaKnown RBP2.42□□□□□ -2.02
SED5YLR026C SPP2Q02521 185 aa2.42□□□□□ -2.02
SED5YLR026C GAS3Q03655 524 aa2.42□□□□□ -2.02
SED5YLR026C YOS9Q99220 542 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms