RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeastyeast

Gene RPL39, Length 156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL39YJL189W YHR139C-AO13536 103 aa-0.47□□□□□ -2.48
RPL39YJL189W YBR063CP38083 404 aa-0.47□□□□□ -2.48
RPL39YJL189W SMB1P40018 196 aaKnown RBP-0.47□□□□□ -2.48
RPL39YJL189W YAE1P47118 141 aaPredicted RBP-0.47□□□□□ -2.48
RPL39YJL189W KNH1P50112 268 aa-0.47□□□□□ -2.48
RPL39YJL189W ARO8P53090 500 aaKnown RBP-0.47□□□□□ -2.48
RPL39YJL189W CUS2P53830 285 aaPredicted RBP-0.47□□□□□ -2.48
RPL39YJL189W NOP13P53883 403 aaKnown RBP RIP-Chip data-0.47□□□□□ -2.48not detected
RPL39YJL189W YOR020W-AQ3E824 90 aa-0.47□□□□□ -2.48
RPL39YJL189W YPL229WQ99395 206 aa-0.47□□□□□ -2.48
RPL39YJL189W SIR2P06700 562 aa-0.48□□□□□ -2.49
RPL39YJL189W SGE1P33335 543 aa-0.48□□□□□ -2.49
RPL39YJL189W CAT5P41735 233 aa-0.48□□□□□ -2.49
RPL39YJL189W TFC1P32367 649 aa-0.49□□□□□ -2.49
RPL39YJL189W MRPL40P36534 297 aa-0.49□□□□□ -2.49
RPL39YJL189W SIP3P38717 1229 aa-0.49□□□□□ -2.49
RPL39YJL189W FLX1P40464 311 aa-0.49□□□□□ -2.49
RPL39YJL189W PSF1Q12488 208 aa-0.49□□□□□ -2.49
RPL39YJL189W STP22P25604 385 aa-0.5□□□□□ -2.49
RPL39YJL189W YET1P35723 206 aa-0.5□□□□□ -2.49
RPL39YJL189W EDC3P39998 551 aaKnown RBP-0.5□□□□□ -2.49
RPL39YJL189W RCE1Q03530 315 aa-0.5□□□□□ -2.49
RPL39YJL189W YPR098CQ06089 161 aa-0.5□□□□□ -2.49
RPL39YJL189W GMC2Q06201 188 aa-0.5□□□□□ -2.49
RPL39YJL189W MDY2Q12285 212 aa-0.5□□□□□ -2.49
RPL39YJL189W UGX2P32772 223 aa-0.51□□□□□ -2.49
RPL39YJL189W SED1Q01589 338 aa-0.51□□□□□ -2.49
RPL39YJL189W TUS1Q06412 1307 aa-0.51□□□□□ -2.49
RPL39YJL189W REX3Q12090 404 aa-0.51□□□□□ -2.49
RPL39YJL189W YPR170W-BP0C5R9 85 aa-0.52□□□□□ -2.49
RPL39YJL189W MRPS28P21771 286 aa-0.52□□□□□ -2.49
RPL39YJL189W YCL042WP25572 119 aa-0.52□□□□□ -2.49
RPL39YJL189W PRS2P38620 318 aaKnown RBP-0.52□□□□□ -2.49
RPL39YJL189W YHL042WP38729 150 aa-0.52□□□□□ -2.49
RPL39YJL189W MEP1P40260 492 aa-0.52□□□□□ -2.49
RPL39YJL189W ALG11P53954 548 aaKnown RBP-0.52□□□□□ -2.49
RPL39YJL189W HOM6P31116 359 aaKnown RBP-0.53□□□□□ -2.49
RPL39YJL189W YEA4P40004 342 aa-0.53□□□□□ -2.49
RPL39YJL189W EAF6P47128 113 aa-0.53□□□□□ -2.49
RPL39YJL189W YNL247WP53852 767 aaKnown RBP-0.53□□□□□ -2.49
RPL39YJL189W CWC27Q02770 301 aa-0.53□□□□□ -2.49
RPL39YJL189W YOR029WQ12243 111 aa-0.53□□□□□ -2.49
RPL39YJL189W SSK22P25390 1331 aaPredicted RBP-0.54□□□□□ -2.5
RPL39YJL189W ERD2P18414 219 aa-0.54□□□□□ -2.5
RPL39YJL189W GLG2P47011 380 aa-0.54□□□□□ -2.5
RPL39YJL189W HAM1P47119 197 aaKnown RBP-0.54□□□□□ -2.5
RPL39YJL189W BLI1P35727 113 aa-0.55□□□□□ -2.5
RPL39YJL189W YBR209WP38311 105 aa-0.55□□□□□ -2.5
RPL39YJL189W RHO3Q00245 231 aaKnown RBP-0.55□□□□□ -2.5
RPL39YJL189W YML096WQ04489 525 aa-0.55□□□□□ -2.5
RPL39YJL189W SSQ1Q05931 657 aaPredicted RBP-0.55□□□□□ -2.5
RPL39YJL189W REP2P03872 296 aa-0.56□□□□□ -2.5
RPL39YJL189W OPY1P38271 328 aa-0.56□□□□□ -2.5
RPL39YJL189W UMP1P38293 148 aa-0.56□□□□□ -2.5
RPL39YJL189W URA8P38627 578 aaPredicted RBP-0.56□□□□□ -2.5
RPL39YJL189W VMA22P38784 181 aa-0.56□□□□□ -2.5
RPL39YJL189W TPM1P17536 199 aaKnown RBP-0.57□□□□□ -2.5
RPL39YJL189W YEL008WP40001 126 aa-0.57□□□□□ -2.5
RPL39YJL189W PRE6P40303 254 aaKnown RBP-0.57□□□□□ -2.5
RPL39YJL189W RSM25P40496 264 aa-0.57□□□□□ -2.5
RPL39YJL189W HYR1P40581 163 aaKnown RBP-0.57□□□□□ -2.5
RPL39YJL189W KAP114P53067 1004 aa-0.57□□□□□ -2.5
RPL39YJL189W YDR209CQ03480 137 aa-0.57□□□□□ -2.5
RPL39YJL189W SEI1Q06058 285 aa-0.57□□□□□ -2.5
RPL39YJL189W YLR413WQ06689 675 aa-0.57□□□□□ -2.5
RPL39YJL189W YLR236CA0A023PZG4 107 aa-0.58□□□□□ -2.5
RPL39YJL189W RIB1P38066 345 aa-0.58□□□□□ -2.5
RPL39YJL189W YHR127WP38833 243 aaKnown RBP-0.58□□□□□ -2.5
RPL39YJL189W YFH7P43591 353 aa-0.58□□□□□ -2.5
RPL39YJL189W USE1P53146 245 aa-0.58□□□□□ -2.5
RPL39YJL189W YNL010WP53981 241 aaKnown RBP-0.58□□□□□ -2.5
RPL39YJL189W YMR252CQ04814 134 aa-0.58□□□□□ -2.5
RPL39YJL189W YHR007C-AQ07074 71 aa-0.58□□□□□ -2.5
RPL39YJL189W RAD28Q12021 506 aa-0.58□□□□□ -2.5
RPL39YJL189W COX2P00410 251 aa-0.59□□□□□ -2.5
RPL39YJL189W MRP1P10662 321 aaKnown RBP-0.59□□□□□ -2.5
RPL39YJL189W MRPL17P36528 281 aa-0.59□□□□□ -2.5
RPL39YJL189W IRC22P40006 225 aa-0.59□□□□□ -2.5
RPL39YJL189W YLR460CP54007 376 aa-0.59□□□□□ -2.5
RPL39YJL189W FSF1Q12029 327 aaKnown RBP-0.59□□□□□ -2.5
RPL39YJL189W FMP49A0A023PZB3 126 aa-0.6□□□□□ -2.51
RPL39YJL189W STF1P01098 86 aa-0.6□□□□□ -2.51
RPL39YJL189W YLR156WP0CE96 114 aa-0.6□□□□□ -2.51
RPL39YJL189W YLR159WP0CE97 114 aa-0.6□□□□□ -2.51
RPL39YJL189W YLR161WP0CE98 114 aa-0.6□□□□□ -2.51
RPL39YJL189W SEC11P15367 167 aa-0.6□□□□□ -2.51
RPL39YJL189W PEX17P40155 199 aa-0.6□□□□□ -2.51
RPL39YJL189W ILM1P47155 203 aa-0.6□□□□□ -2.51
RPL39YJL189W SNZ1Q03148 297 aa-0.6□□□□□ -2.51
RPL39YJL189W BFR1P38934 470 aaKnown RBP RIP-Chip data-0.61□□□□□ -2.51not detected
RPL39YJL189W ABF2Q02486 183 aa-0.61□□□□□ -2.51
RPL39YJL189W COX20Q04935 205 aa-0.61□□□□□ -2.51
RPL39YJL189W ATG40Q99325 256 aa-0.61□□□□□ -2.51
RPL39YJL189W DBF2P22204 572 aa-0.62□□□□□ -2.51
RPL39YJL189W SNC2P33328 115 aa-0.62□□□□□ -2.51
RPL39YJL189W YMR144WP40214 342 aaKnown RBP-0.62□□□□□ -2.51
RPL39YJL189W YDR248CQ03786 193 aa-0.62□□□□□ -2.51
RPL39YJL189W LPP1Q04396 274 aa-0.62□□□□□ -2.51
RPL39YJL189W YLR126CQ12288 251 aa-0.62□□□□□ -2.51
RPL39YJL189W TIM9O74700 87 aa-0.63□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms