RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	YKL075C	P36083	450 aa		1.25	□□□□□ -2.21
SPO11	YHL022C	PGD1	P40356	397 aa		1.25	□□□□□ -2.21
SPO11	YHL022C	YPL229W	Q99395	206 aa		1.25	□□□□□ -2.21
SPO11	YHL022C	VAR1	P02381	398 aa		1.24	□□□□□ -2.21
SPO11	YHL022C	CPA1	P07258	411 aa	Known RBP	1.24	□□□□□ -2.21
SPO11	YHL022C	YBR063C	P38083	404 aa		1.24	□□□□□ -2.21
SPO11	YHL022C	YMR144W	P40214	342 aa	Known RBP	1.24	□□□□□ -2.21
SPO11	YHL022C	GPI8	P49018	411 aa		1.24	□□□□□ -2.21
SPO11	YHL022C	MPA43	P53583	542 aa	Predicted RBP	1.24	□□□□□ -2.21
SPO11	YHL022C	ABF2	Q02486	183 aa		1.24	□□□□□ -2.21
SPO11	YHL022C	YPL162C	Q12042	273 aa		1.24	□□□□□ -2.21
SPO11	YHL022C	YNL217W	P40152	326 aa		1.23	□□□□□ -2.21
SPO11	YHL022C	YML096W	Q04489	525 aa		1.23	□□□□□ -2.21
SPO11	YHL022C	YHR139C-A	O13536	103 aa		1.22	□□□□□ -2.21
SPO11	YHL022C	RPL27B	P0C2H7	136 aa	Known RBP	1.22	□□□□□ -2.21
SPO11	YHL022C	OM45	P16547	393 aa		1.22	□□□□□ -2.21
SPO11	YHL022C	BTS1	Q12051	335 aa		1.22	□□□□□ -2.21
SPO11	YHL022C	PSF1	Q12488	208 aa		1.22	□□□□□ -2.21
SPO11	YHL022C	QCR8	P08525	94 aa		1.21	□□□□□ -2.22
SPO11	YHL022C	RIB1	P38066	345 aa		1.21	□□□□□ -2.22
SPO11	YHL022C	AIF1	P52923	378 aa		1.21	□□□□□ -2.22
SPO11	YHL022C	TRM12	Q04235	462 aa		1.21	□□□□□ -2.22
SPO11	YHL022C	MSH5	Q12175	901 aa		1.21	□□□□□ -2.22
SPO11	YHL022C	SPG3	Q04398	127 aa	Predicted RBP	1.2	□□□□□ -2.22
SPO11	YHL022C	ANT1	Q06497	328 aa		1.2	□□□□□ -2.22
SPO11	YHL022C	YER076C	P40049	302 aa		1.19	□□□□□ -2.22
SPO11	YHL022C	DID2	P69771	204 aa		1.19	□□□□□ -2.22
SPO11	YHL022C	UBC7	Q02159	165 aa		1.19	□□□□□ -2.22
SPO11	YHL022C	YML108W	Q03759	105 aa		1.19	□□□□□ -2.22
SPO11	YHL022C	YLR126C	Q12288	251 aa		1.19	□□□□□ -2.22
SPO11	YHL022C	MET5	P47169	1442 aa		1.18	□□□□□ -2.22
SPO11	YHL022C	TCP1	P12612	559 aa	Known RBP	1.18	□□□□□ -2.22
SPO11	YHL022C	GAA1	P39012	614 aa		1.18	□□□□□ -2.22
SPO11	YHL022C	HOC1	P47124	396 aa		1.18	□□□□□ -2.22
SPO11	YHL022C	DOC1	P53068	250 aa		1.18	□□□□□ -2.22
SPO11	YHL022C	YNL010W	P53981	241 aa	Known RBP	1.18	□□□□□ -2.22
SPO11	YHL022C	YOR029W	Q12243	111 aa		1.18	□□□□□ -2.22
SPO11	YHL022C	VPS21	P36017	210 aa	Known RBP	1.17	□□□□□ -2.22
SPO11	YHL022C	RTT105	P40063	208 aa		1.17	□□□□□ -2.22
SPO11	YHL022C	PEX17	P40155	199 aa		1.17	□□□□□ -2.22
SPO11	YHL022C	YRB2	P40517	327 aa		1.17	□□□□□ -2.22
SPO11	YHL022C	YMD8	Q03697	442 aa		1.17	□□□□□ -2.22
SPO11	YHL022C	REP2	P03872	296 aa		1.16	□□□□□ -2.22
SPO11	YHL022C	YPR170W-B	P0C5R9	85 aa		1.16	□□□□□ -2.22
SPO11	YHL022C	MRPS28	P21771	286 aa		1.16	□□□□□ -2.22
SPO11	YHL022C	KDX1	P36005	433 aa		1.16	□□□□□ -2.22
SPO11	YHL022C	MCM22	P47167	239 aa		1.16	□□□□□ -2.22
SPO11	YHL022C	YJR149W	P47177	404 aa		1.16	□□□□□ -2.22
SPO11	YHL022C	SAY1	P53324	424 aa		1.16	□□□□□ -2.22
SPO11	YHL022C	KAP95	Q06142	861 aa	Known RBP	1.16	□□□□□ -2.22
SPO11	YHL022C	YET1	P35723	206 aa		1.15	□□□□□ -2.23
SPO11	YHL022C	TVP38	P36164	337 aa		1.15	□□□□□ -2.23
SPO11	YHL022C	IRC22	P40006	225 aa		1.15	□□□□□ -2.23
SPO11	YHL022C	YOL107W	Q12239	342 aa		1.15	□□□□□ -2.23
SPO11	YHL022C	LSO2	Q3E772	92 aa	Known RBP	1.15	□□□□□ -2.23
SPO11	YHL022C	PDR18	P53756	1333 aa		1.15	□□□□□ -2.23
SPO11	YHL022C	TFC1	P32367	649 aa		1.14	□□□□□ -2.23
SPO11	YHL022C	CUS2	P53830	285 aa	Predicted RBP	1.14	□□□□□ -2.23
SPO11	YHL022C	KRE28	Q04431	385 aa		1.14	□□□□□ -2.23
SPO11	YHL022C	SRB4	P32569	687 aa		1.13	□□□□□ -2.23
SPO11	YHL022C	UMP1	P38293	148 aa		1.13	□□□□□ -2.23
SPO11	YHL022C	RIO2	P40160	425 aa	Known RBP	1.13	□□□□□ -2.23
SPO11	YHL022C	MRPL50	P53724	139 aa		1.13	□□□□□ -2.23
SPO11	YHL022C	MSB2	P32334	1306 aa		1.13	□□□□□ -2.23
SPO11	YHL022C	ATG22	P25568	528 aa		1.12	□□□□□ -2.23
SPO11	YHL022C	RIB7	P33312	244 aa		1.12	□□□□□ -2.23
SPO11	YHL022C	DOG2	P38773	246 aa		1.12	□□□□□ -2.23
SPO11	YHL022C	ERJ5	P43613	295 aa	Predicted RBP	1.12	□□□□□ -2.23
SPO11	YHL022C	YNR077C	P53758	84 aa		1.12	□□□□□ -2.23
SPO11	YHL022C	LPP1	Q04396	274 aa		1.12	□□□□□ -2.23
SPO11	YHL022C	PAM18	Q07914	168 aa		1.12	□□□□□ -2.23
SPO11	YHL022C	YDL180W	Q12301	547 aa		1.12	□□□□□ -2.23
SPO11	YHL022C	POP4	P38336	279 aa		1.11	□□□□□ -2.23
SPO11	YHL022C	BNA6	P43619	295 aa		1.11	□□□□□ -2.23
SPO11	YHL022C	RPL37A	P49166	88 aa	Known RBP	1.11	□□□□□ -2.23
SPO11	YHL022C	POP3	P53833	195 aa	Predicted RBP	1.11	□□□□□ -2.23
SPO11	YHL022C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	1.11	□□□□□ -2.23	not detected
SPO11	YHL022C	YDR248C	Q03786	193 aa		1.11	□□□□□ -2.23
SPO11	YHL022C	YNL146C-A	Q3E7Z1	64 aa		1.11	□□□□□ -2.23
SPO11	YHL022C	RPT5	P33297	434 aa	Known RBP	1.1	□□□□□ -2.23
SPO11	YHL022C	CUE1	P38428	203 aa		1.1	□□□□□ -2.23
SPO11	YHL022C	URA8	P38627	578 aa	Predicted RBP	1.1	□□□□□ -2.23
SPO11	YHL022C	SWP1	Q02795	286 aa		1.1	□□□□□ -2.23
SPO11	YHL022C	SNZ1	Q03148	297 aa		1.1	□□□□□ -2.23
SPO11	YHL022C	ATG31	Q12421	196 aa		1.1	□□□□□ -2.23
SPO11	YHL022C	BCY1	P07278	416 aa	Known RBP	1.09	□□□□□ -2.23
SPO11	YHL022C	MRPL25	P23369	157 aa		1.09	□□□□□ -2.23
SPO11	YHL022C	SNC2	P33328	115 aa		1.09	□□□□□ -2.23
SPO11	YHL022C	NSA1	P53136	463 aa	Predicted RBP	1.09	□□□□□ -2.23
SPO11	YHL022C	YMR007W	Q03675	126 aa		1.09	□□□□□ -2.23
SPO11	YHL022C	RRP36	Q12481	300 aa	Predicted RBP	1.09	□□□□□ -2.23
SPO11	YHL022C	TSC3	Q3E790	80 aa		1.09	□□□□□ -2.23
SPO11	YHL022C	YLR156W	P0CE96	114 aa		1.08	□□□□□ -2.24
SPO11	YHL022C	YLR159W	P0CE97	114 aa		1.08	□□□□□ -2.24
SPO11	YHL022C	YLR161W	P0CE98	114 aa		1.08	□□□□□ -2.24
SPO11	YHL022C	MRPL28	P36527	147 aa		1.08	□□□□□ -2.24
SPO11	YHL022C	YBR209W	P38311	105 aa		1.08	□□□□□ -2.24
SPO11	YHL022C	TRM9	P49957	279 aa		1.08	□□□□□ -2.24
SPO11	YHL022C	YLR173W	Q06247	608 aa		1.08	□□□□□ -2.24
SPO11	YHL022C	FSF1	Q12029	327 aa	Known RBP	1.08	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms