RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W FRE3Q08905 711 aa5.27□□□□□ -1.57
MSP1YGR028W EAF3Q12432 401 aa5.27□□□□□ -1.57
MSP1YGR028W YER175W-AQ8TGU4 54 aa5.27□□□□□ -1.57
MSP1YGR028W TDH2P00358 332 aaKnown RBP5.26□□□□□ -1.57
MSP1YGR028W ADK1P07170 222 aaKnown RBP5.26□□□□□ -1.57
MSP1YGR028W DOA4P32571 926 aa5.26□□□□□ -1.57
MSP1YGR028W NAT2P37293 288 aa5.26□□□□□ -1.57
MSP1YGR028W SDS24P38314 527 aa5.26□□□□□ -1.57
MSP1YGR028W PMT5P52867 743 aa5.26□□□□□ -1.57
MSP1YGR028W POP6P53218 158 aa5.26□□□□□ -1.57
MSP1YGR028W YLR283WQ05867 314 aa5.26□□□□□ -1.57
MSP1YGR028W PIN3Q06449 215 aa5.26□□□□□ -1.57
MSP1YGR028W TRM10Q12400 293 aa5.26□□□□□ -1.57
MSP1YGR028W MPD1Q12404 318 aaKnown RBP5.26□□□□□ -1.57
MSP1YGR028W FRE6Q12473 712 aa5.26□□□□□ -1.57
MSP1YGR028W MDH1P17505 334 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
MSP1YGR028W VPS17P32913 551 aa5.25□□□□□ -1.57
MSP1YGR028W PAU24P38155 120 aa5.25□□□□□ -1.57
MSP1YGR028W RIO2P40160 425 aaKnown RBP5.25□□□□□ -1.57
MSP1YGR028W YPL067CQ02754 198 aa5.25□□□□□ -1.57
MSP1YGR028W HUT1Q12520 339 aa5.25□□□□□ -1.57
MSP1YGR028W RPL25P04456 142 aaKnown RBP5.24□□□□□ -1.57
MSP1YGR028W MET17P06106 444 aa5.24□□□□□ -1.57
MSP1YGR028W MRP1P10662 321 aaKnown RBP5.24□□□□□ -1.57
MSP1YGR028W IMP1P28627 190 aa5.24□□□□□ -1.57
MSP1YGR028W ACH1P32316 526 aa5.24□□□□□ -1.57
MSP1YGR028W RCN1P36054 211 aa5.24□□□□□ -1.57
MSP1YGR028W MSS2P40990 351 aa5.24□□□□□ -1.57
MSP1YGR028W UFD1P53044 361 aa5.24□□□□□ -1.57
MSP1YGR028W MRH4P53166 561 aa5.24□□□□□ -1.57
MSP1YGR028W MAK3Q03503 176 aa5.24□□□□□ -1.57
MSP1YGR028W YMR254CQ04838 102 aa5.24□□□□□ -1.57
MSP1YGR028W PEX30Q06169 523 aa5.24□□□□□ -1.57
MSP1YGR028W YBR255C-AQ3E776 120 aa5.24□□□□□ -1.57
MSP1YGR028W YLR099W-AQ3E798 87 aa5.24□□□□□ -1.57
MSP1YGR028W MED11Q99278 115 aa5.24□□□□□ -1.57
MSP1YGR028W CDC28P00546 298 aaKnown RBP5.23□□□□□ -1.57
MSP1YGR028W COX9P07255 59 aa5.23□□□□□ -1.57
MSP1YGR028W HXT2P23585 541 aa5.23□□□□□ -1.57
MSP1YGR028W NVJ1P38881 321 aa5.23□□□□□ -1.57
MSP1YGR028W AVT6P40074 448 aa5.23□□□□□ -1.57
MSP1YGR028W PDS1P40316 373 aaPredicted RBP5.23□□□□□ -1.57
MSP1YGR028W SSN8P47821 323 aa5.23□□□□□ -1.57
MSP1YGR028W GLO1P50107 326 aa5.23□□□□□ -1.57
MSP1YGR028W YGL204CP53089 101 aa5.23□□□□□ -1.57
MSP1YGR028W LUC7Q07508 261 aaPredicted RBP5.23□□□□□ -1.57
MSP1YGR028W YDL242WQ07746 117 aa5.23□□□□□ -1.57
MSP1YGR028W SRL1Q08673 210 aa5.23□□□□□ -1.57
MSP1YGR028W RFM1Q12192 310 aa5.23□□□□□ -1.57
MSP1YGR028W RBD2Q12270 262 aa5.23□□□□□ -1.57
MSP1YGR028W GAL1P04385 528 aa5.22□□□□□ -1.57
MSP1YGR028W ARO7P32178 256 aa5.22□□□□□ -1.57
MSP1YGR028W YBL010CP32788 280 aa5.22□□□□□ -1.57
MSP1YGR028W SNC2P33328 115 aa5.22□□□□□ -1.57
MSP1YGR028W YKL102CP34249 101 aa5.22□□□□□ -1.57
MSP1YGR028W BUD25P85052 153 aa5.22□□□□□ -1.57
MSP1YGR028W YPL108WQ02872 168 aaPredicted RBP5.22□□□□□ -1.57
MSP1YGR028W MRX9Q07349 420 aaKnown RBP5.22□□□□□ -1.57
MSP1YGR028W GRC3Q07845 632 aa5.22□□□□□ -1.57
MSP1YGR028W YOR186WQ08560 144 aa5.22□□□□□ -1.57
MSP1YGR028W TIR4Q12218 487 aaPredicted RBP5.22□□□□□ -1.57
MSP1YGR028W ORT1Q12375 292 aa5.22□□□□□ -1.57
MSP1YGR028W YEL009C-AA0A023PZF2 135 aa5.21□□□□□ -1.58
MSP1YGR028W MATALPHA1P0CY06 175 aa5.21□□□□□ -1.58
MSP1YGR028W HMLALPHA1P0CY07 175 aa5.21□□□□□ -1.58
MSP1YGR028W PET122P10355 254 aa5.21□□□□□ -1.58
MSP1YGR028W PRE7P23724 241 aaKnown RBP5.21□□□□□ -1.58
MSP1YGR028W ERG24P32462 438 aaKnown RBP5.21□□□□□ -1.58
MSP1YGR028W PAU2P32612 120 aa5.21□□□□□ -1.58
MSP1YGR028W YKL063CP35725 167 aa5.21□□□□□ -1.58
MSP1YGR028W UMP1P38293 148 aa5.21□□□□□ -1.58
MSP1YGR028W ATG17Q06410 417 aa5.21□□□□□ -1.58
MSP1YGR028W RAX2Q12465 1220 aa5.21□□□□□ -1.58
MSP1YGR028W ATP10P18496 279 aa5.2□□□□□ -1.58
MSP1YGR028W AHC2P25649 128 aa5.2□□□□□ -1.58
MSP1YGR028W ARO4P32449 370 aaKnown RBP5.2□□□□□ -1.58
MSP1YGR028W SIP1P32578 815 aa5.2□□□□□ -1.58
MSP1YGR028W TMA19P35691 167 aaKnown RBP5.2□□□□□ -1.58
MSP1YGR028W SFK1P35735 353 aa5.2□□□□□ -1.58
MSP1YGR028W YCR041WP37265 110 aa5.2□□□□□ -1.58
MSP1YGR028W XPT1P47165 209 aa5.2□□□□□ -1.58
MSP1YGR028W YDL186WP48568 277 aa5.2□□□□□ -1.58
MSP1YGR028W YGL262WP53054 175 aa5.2□□□□□ -1.58
MSP1YGR028W DOC1P53068 250 aa5.2□□□□□ -1.58
MSP1YGR028W YGL114WP53134 725 aa5.2□□□□□ -1.58
MSP1YGR028W PRP3Q03338 469 aaPredicted RBP5.2□□□□□ -1.58
MSP1YGR028W YMR166CQ03829 368 aa5.2□□□□□ -1.58
MSP1YGR028W LIP2Q06005 328 aa5.2□□□□□ -1.58
MSP1YGR028W NEJ1Q06148 342 aa5.2□□□□□ -1.58
MSP1YGR028W GCN4P03069 281 aa5.19□□□□□ -1.58
MSP1YGR028W SPS4P09937 338 aa5.19□□□□□ -1.58
MSP1YGR028W YLL053CP0CD98 152 aa5.19□□□□□ -1.58
MSP1YGR028W ADH5P38113 351 aaKnown RBP5.19□□□□□ -1.58
MSP1YGR028W FIG1P38224 298 aa5.19□□□□□ -1.58
MSP1YGR028W ICS2P38284 255 aa5.19□□□□□ -1.58
MSP1YGR028W MRX5P47007 382 aa5.19□□□□□ -1.58
MSP1YGR028W EFM3P47163 339 aa5.19□□□□□ -1.58
MSP1YGR028W SCW4P53334 386 aaKnown RBP5.19□□□□□ -1.58
MSP1YGR028W RPL21AQ02753 160 aaKnown RBP5.19□□□□□ -1.58
MSP1YGR028W RRP17Q04031 235 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms