RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC20	YDR498C	BPH1	P25356	2167 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	YBR085C-A	O43137	85 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SEC20	YDR498C	GAL1	P04385	528 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	NAM2	P11325	894 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	RFA3	P26755	122 aa	Known RBP	4.91	□□□□□ -1.62
SEC20	YDR498C	YMR262W	P38430	313 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	RFC2	P40348	353 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	FLX1	P40464	311 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	BMT5	P40493	336 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	YIR035C	P40579	254 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	GLR1	P41921	483 aa	Known RBP	4.91	□□□□□ -1.62
SEC20	YDR498C	SSN8	P47821	323 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	MRPL19	P53875	158 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	RSM10	Q03201	203 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	YDR391C	Q04170	232 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	DAL4	Q04895	635 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	ALG6	Q12001	544 aa	Known RBP	4.91	□□□□□ -1.62
SEC20	YDR498C	FOL3	Q12676	427 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC20	YDR498C	YOR192C-C	Q3E736	78 aa		4.91	□□□□□ -1.62
SEC20	YDR498C	MSI1	P13712	422 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	SEC62	P21825	274 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	RPB7	P34087	171 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	MOH1	P38191	138 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	YMR144W	P40214	342 aa	Known RBP	4.9	□□□□□ -1.63
SEC20	YDR498C	YFL051C	P43552	160 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	YGL117W	P53133	265 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	NCE103	P53615	221 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	ELA1	P53861	379 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC20	YDR498C	CAB5	Q03941	241 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	RFU1	Q08003	200 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	SCP1	Q08873	200 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	YPL278C	Q08990	100 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	FRE8	Q12209	686 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	YLR108C	Q12259	485 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	UBA3	Q99344	299 aa		4.9	□□□□□ -1.63
SEC20	YDR498C	QCR2	P07257	368 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	FUS3	P16892	353 aa	Known RBP	4.89	□□□□□ -1.63
SEC20	YDR498C	MAG1	P22134	296 aa	Known RBP	4.89	□□□□□ -1.63
SEC20	YDR498C	ERG2	P32352	222 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	GLC7	P32598	312 aa	Known RBP	4.89	□□□□□ -1.63
SEC20	YDR498C	MNS1	P32906	549 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	MCH2	P36032	473 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	SWD3	P38123	315 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	YBR096W	P38256	230 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	POP2	P39008	433 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	YER079W	P40052	210 aa	Known RBP	4.89	□□□□□ -1.63
SEC20	YDR498C	GPP1	P41277	250 aa	Known RBP	4.89	□□□□□ -1.63
SEC20	YDR498C	YJR011C	P47086	261 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC20	YDR498C	YIP5	P53108	310 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	MRPL22	P53881	309 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	ODC1	Q03028	310 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	DIG2	Q03373	323 aa	Known RBP	4.89	□□□□□ -1.63
SEC20	YDR498C	RCE1	Q03530	315 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	YOR186W	Q08560	144 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	FIT3	Q08907	204 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	YPR108W-A	Q3E7B3	70 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC20	YDR498C	YLR365W	Q7LIF2	110 aa		4.89	□□□□□ -1.63
SEC20	YDR498C	PRP8	P33334	2413 aa	Known RBP	4.88	□□□□□ -1.63
SEC20	YDR498C	IPP1	P00817	287 aa	Known RBP	4.88	□□□□□ -1.63
SEC20	YDR498C	IMP1	P28627	190 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	RPD3	P32561	433 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	PDC2	P32896	925 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	NAT2	P37293	288 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	ARC40	P38328	384 aa	Known RBP	4.88	□□□□□ -1.63
SEC20	YDR498C	COS8	P38723	381 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	GCV3	P39726	170 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC20	YDR498C	YER158C	P40095	573 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	YGL260W	P53056	76 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	TIM44	Q01852	431 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	VPS28	Q02767	242 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	SRP1	Q02821	542 aa	Known RBP	4.88	□□□□□ -1.63
SEC20	YDR498C	YDR415C	Q04033	374 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC20	YDR498C	ASM4	Q05166	528 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	RAF1	Q06891	181 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	GAT3	Q07928	141 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	USB1	Q12208	290 aa	Known RBP	4.88	□□□□□ -1.63
SEC20	YDR498C	HUG1	Q6Q5K6	68 aa		4.88	□□□□□ -1.63
SEC20	YDR498C	HEM4	P06174	275 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	CBT1	P36038	271 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC20	YDR498C	ASP1	P38986	381 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC20	YDR498C	SSO2	P39926	295 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	SEC24	P40482	926 aa	Known RBP	4.87	□□□□□ -1.63
SEC20	YDR498C	AGX1	P43567	385 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	GNA1	P43577	159 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC20	YDR498C	PHO23	P50947	330 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	PNC1	P53184	216 aa	Known RBP	4.87	□□□□□ -1.63
SEC20	YDR498C	RPN14	P53196	417 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	GIM3	P53900	129 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	SKO1	Q02100	647 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	YPL077C	Q02831	240 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	YMR279C	Q03263	540 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	TSA2	Q04120	196 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	CAC2	Q04199	468 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	YDR114C	Q04597	100 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	YTH1	Q06102	208 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC20	YDR498C	NOC4	Q06512	552 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC20	YDR498C	BER1	Q06688	274 aa	Known RBP	4.87	□□□□□ -1.63
SEC20	YDR498C	RRS1	Q08746	203 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms