RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	RRP4	P38792	359 aa	Known RBP	3.34	□□□□□ -1.88
RPO21	YDL140C	SUR2	P38992	349 aa		3.34	□□□□□ -1.88
RPO21	YDL140C	MID1	P41821	548 aa		3.34	□□□□□ -1.88
RPO21	YDL140C	POP6	P53218	158 aa		3.34	□□□□□ -1.88
RPO21	YDL140C	STP4	Q07351	490 aa		3.34	□□□□□ -1.88
RPO21	YDL140C	GEP3	Q08622	556 aa		3.34	□□□□□ -1.88
RPO21	YDL140C	HSP42	Q12329	375 aa		3.34	□□□□□ -1.88
RPO21	YDL140C	USO1	P25386	1790 aa		3.34	□□□□□ -1.88
RPO21	YDL140C	TIR1	P10863	254 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	UTH1	P36135	365 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	YBR292C	P38357	123 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	STP2	P38704	541 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	YHR177W	P38867	453 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	SIM1	P40472	476 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	GLC8	P41818	229 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	FMP33	P46998	180 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	YDR102C	Q03864	110 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	TAF3	Q12297	353 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	SIR2	P06700	562 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	YOL162W	P0CF19	215 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	HOM6	P31116	359 aa	Known RBP	3.33	□□□□□ -1.88
RPO21	YDL140C	CSH1	P38287	376 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	BUD32	P53323	261 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	TIR4	Q12218	487 aa	Predicted RBP	3.33	□□□□□ -1.88
RPO21	YDL140C	SMT3	Q12306	101 aa	Known RBP	3.33	□□□□□ -1.88
RPO21	YDL140C	GAL1	P04385	528 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	MDH2	P22133	377 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	TIM12	P32830	109 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	YUH1	P35127	236 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	RPS27A	P35997	82 aa	Known RBP	3.33	□□□□□ -1.88
RPO21	YDL140C	RPS27B	P38711	82 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	YHR022C	P38763	256 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	GGC1	P38988	300 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	YGL159W	P53110	370 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	YLR179C	Q06252	201 aa	Known RBP	3.33	□□□□□ -1.88
RPO21	YDL140C	MIM1	Q08176	113 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	NFI1	Q12216	726 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	YCL021W-A	Q96VH3	125 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	NHP6B	P11633	99 aa	Known RBP	3.33	□□□□□ -1.88
RPO21	YDL140C	PEX7	P39108	375 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	COX15	P40086	486 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	GVP36	P40531	326 aa	Known RBP	3.33	□□□□□ -1.88
RPO21	YDL140C	OCA2	P53949	197 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	REC102	Q02721	264 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	RPL21A	Q02753	160 aa	Known RBP	3.33	□□□□□ -1.88
RPO21	YDL140C	CTL1	Q03220	320 aa	Known RBP	3.33	□□□□□ -1.88
RPO21	YDL140C	ARR3	Q06598	404 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	FIT3	Q08907	204 aa		3.33	□□□□□ -1.88
RPO21	YDL140C	RPL21B	Q12672	160 aa	Known RBP	3.33	□□□□□ -1.88
RPO21	YDL140C	MRP1	P10662	321 aa	Known RBP	3.32	□□□□□ -1.88
RPO21	YDL140C	ATR1	P13090	542 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	URA5	P13298	226 aa	Known RBP	3.32	□□□□□ -1.88
RPO21	YDL140C	TFS1	P14306	219 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	FIT1	Q04433	528 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	ATX2	Q12067	313 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	MCT1	Q12283	360 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	SAR1	P20606	190 aa	Known RBP	3.32	□□□□□ -1.88
RPO21	YDL140C	TIR2	P33890	251 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	SDH4	P37298	181 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	IMD3	P50095	523 aa	Known RBP	3.32	□□□□□ -1.88
RPO21	YDL140C	MST27	P53176	234 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	RLM1	Q12224	676 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	MES1	P00958	751 aa	Known RBP	3.32	□□□□□ -1.88
RPO21	YDL140C	YSR3	P23501	404 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	YCL049C	P25577	312 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	TRR1	P29509	319 aa	Known RBP	3.32	□□□□□ -1.88
RPO21	YDL140C	PMU1	P36069	295 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	AVT5	P38176	459 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	HNT2	P49775	206 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	DIA3	P52290	468 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	TPN1	P53099	579 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	SPG4	Q04438	115 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	LOA1	Q06508	300 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	SCP1	Q08873	200 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	FAB1	P34756	2278 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	POF1	P25576	258 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	ALK2	P32789	676 aa	Predicted RBP	3.32	□□□□□ -1.88
RPO21	YDL140C	VAM7	P32912	316 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	ISC1	P40015	477 aa	Known RBP	3.32	□□□□□ -1.88
RPO21	YDL140C	PEX17	P40155	199 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	TIM44	Q01852	431 aa		3.32	□□□□□ -1.88
RPO21	YDL140C	NGL1	Q08213	363 aa	Known RBP	3.32	□□□□□ -1.88
RPO21	YDL140C	ERG27	Q12452	347 aa	Known RBP	3.32	□□□□□ -1.88
RPO21	YDL140C	FUR4	P05316	633 aa	Known RBP	3.31	□□□□□ -1.88
RPO21	YDL140C	NFS1	P25374	497 aa		3.31	□□□□□ -1.88
RPO21	YDL140C	MRP17	P28778	131 aa		3.31	□□□□□ -1.88
RPO21	YDL140C	FAA1	P30624	700 aa	Known RBP	3.31	□□□□□ -1.88
RPO21	YDL140C	EMP24	P32803	203 aa	Known RBP	3.31	□□□□□ -1.88
RPO21	YDL140C	PRY2	P36110	329 aa		3.31	□□□□□ -1.88
RPO21	YDL140C	TIM17	P39515	158 aa		3.31	□□□□□ -1.88
RPO21	YDL140C	TDA4	P47153	279 aa		3.31	□□□□□ -1.88
RPO21	YDL140C	GTF1	P53260	183 aa	Predicted RBP	3.31	□□□□□ -1.88
RPO21	YDL140C	ACT1	P60010	375 aa	Known RBP	3.31	□□□□□ -1.88
RPO21	YDL140C	YOL019W	Q08157	551 aa		3.31	□□□□□ -1.88
RPO21	YDL140C	TMC1	Q08422	150 aa	Predicted RBP	3.31	□□□□□ -1.88
RPO21	YDL140C	YPR202W	Q08993	238 aa		3.31	□□□□□ -1.88
RPO21	YDL140C	LSO2	Q3E772	92 aa	Known RBP	3.31	□□□□□ -1.88
RPO21	YDL140C	BI3	Q9ZZW7	517 aa		3.31	□□□□□ -1.88
RPO21	YDL140C	POP2	P39008	433 aa		3.31	□□□□□ -1.88
RPO21	YDL140C	GPP2	P40106	250 aa	Known RBP	3.31	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms