RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C OTU1P43558 301 aa2.05□□□□□ -2.08
UBX3YDL091C FAR7P43592 221 aa2.05□□□□□ -2.08
UBX3YDL091C YJR079WP47126 109 aa2.05□□□□□ -2.08
UBX3YDL091C YJR111CP47148 283 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C JHD2P47156 728 aaPredicted RBP2.05□□□□□ -2.08
UBX3YDL091C SBH2P52871 88 aa2.05□□□□□ -2.08
UBX3YDL091C DID2P69771 204 aa2.05□□□□□ -2.08
UBX3YDL091C SAE3P89114 91 aa2.05□□□□□ -2.08
UBX3YDL091C OST6Q03723 332 aa2.05□□□□□ -2.08
UBX3YDL091C YMR253CQ04835 414 aa2.05□□□□□ -2.08
UBX3YDL091C RRP5Q05022 1729 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C DPP1Q05521 289 aa2.05□□□□□ -2.08
UBX3YDL091C SDO1Q07953 250 aaKnown RBP2.05□□□□□ -2.08
UBX3YDL091C YLR036CQ07986 203 aa2.05□□□□□ -2.08
UBX3YDL091C PER33Q12144 273 aa2.05□□□□□ -2.08
UBX3YDL091C YHR213W-AQ8TGT4 77 aa2.05□□□□□ -2.08
UBX3YDL091C AI5_BETAQ9ZZX0 354 aa2.05□□□□□ -2.08
UBX3YDL091C TY1B-HO13535 1793 aa2.04□□□□□ -2.08
UBX3YDL091C TY1B-DR5P0C2I2 1755 aa2.04□□□□□ -2.08
UBX3YDL091C TY1B-DR6P0C2I3 1755 aa2.04□□□□□ -2.08
UBX3YDL091C TY1B-LR2P0C2I5 1755 aa2.04□□□□□ -2.08
UBX3YDL091C TY1B-LR3P0C2I6 1755 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C TY1B-PR1P0C2I9 1755 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C TY1B-PR2P0C2J0 1756 aa2.04□□□□□ -2.08
UBX3YDL091C TY1B-PR3P0C2J1 1755 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C TY1B-JR1P47098 1755 aa2.04□□□□□ -2.08
UBX3YDL091C TY1B-ML2Q03434 1755 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C TY1B-ER1Q03612 1755 aa2.04□□□□□ -2.08
UBX3YDL091C TY1B-ML1Q04711 1755 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C TY1B-GR2Q12269 1755 aa2.04□□□□□ -2.08
UBX3YDL091C TY1B-OLQ12273 1755 aa2.04□□□□□ -2.08
UBX3YDL091C TY1B-PLQ12414 1755 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C YMR316C-AI2HB70 103 aa2.04□□□□□ -2.08
UBX3YDL091C HTB1P02293 131 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C HTB2P02294 131 aa2.04□□□□□ -2.08
UBX3YDL091C MET2P08465 486 aa2.04□□□□□ -2.08
UBX3YDL091C RPS28BP0C0X0 67 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C PET9P18239 318 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C PPA2P28239 310 aa2.04□□□□□ -2.08
UBX3YDL091C SPT14P32363 452 aa2.04□□□□□ -2.08
UBX3YDL091C ARO4P32449 370 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C AEP1P32493 518 aa2.04□□□□□ -2.08
UBX3YDL091C ALK2P32789 676 aaPredicted RBP2.04□□□□□ -2.08
UBX3YDL091C TKL2P33315 681 aa2.04□□□□□ -2.08
UBX3YDL091C TAF14P35189 244 aa2.04□□□□□ -2.08
UBX3YDL091C CLG1P35190 452 aa2.04□□□□□ -2.08
UBX3YDL091C YCR087C-AP37263 153 aa2.04□□□□□ -2.08
UBX3YDL091C FMP23P38231 175 aa2.04□□□□□ -2.08
UBX3YDL091C AVT6P40074 448 aa2.04□□□□□ -2.08
UBX3YDL091C FMC1P40491 155 aa2.04□□□□□ -2.08
UBX3YDL091C ECO1P43605 281 aa2.04□□□□□ -2.08
UBX3YDL091C YGR017WP53210 297 aa2.04□□□□□ -2.08
UBX3YDL091C TIM21P53220 239 aa2.04□□□□□ -2.08
UBX3YDL091C YNR062CP53748 327 aa2.04□□□□□ -2.08
UBX3YDL091C CUS2P53830 285 aaPredicted RBP2.04□□□□□ -2.08
UBX3YDL091C ALG11P53954 548 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C SPP2Q02521 185 aa2.04□□□□□ -2.08
UBX3YDL091C YDC1Q02896 317 aa2.04□□□□□ -2.08
UBX3YDL091C YML018CQ03730 393 aa2.04□□□□□ -2.08
UBX3YDL091C CSN9Q03981 162 aa2.04□□□□□ -2.08
UBX3YDL091C SFH1Q06168 426 aa2.04□□□□□ -2.08
UBX3YDL091C LDB18Q07887 179 aa2.04□□□□□ -2.08
UBX3YDL091C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
UBX3YDL091C YPL264CQ08980 353 aa2.04□□□□□ -2.08
UBX3YDL091C GPM2Q12008 311 aa2.04□□□□□ -2.08
UBX3YDL091C BTS1Q12051 335 aa2.04□□□□□ -2.08
UBX3YDL091C YOR214CQ12282 236 aa2.04□□□□□ -2.08
UBX3YDL091C EMP46Q12396 444 aa2.04□□□□□ -2.08
UBX3YDL091C PSF1Q12488 208 aa2.04□□□□□ -2.08
UBX3YDL091C EFG1Q3E705 233 aaKnown RBP2.04□□□□□ -2.08
UBX3YDL091C RPS28AQ3E7X9 67 aaPredicted RBP2.04□□□□□ -2.08
UBX3YDL091C PET20Q99373 253 aa2.04□□□□□ -2.08
UBX3YDL091C ULS1Q08562 1619 aa2.04□□□□□ -2.08
UBX3YDL091C ATG2P53855 1592 aa2.03□□□□□ -2.08
UBX3YDL091C SWR1Q05471 1514 aa2.03□□□□□ -2.08
UBX3YDL091C HAP2P06774 265 aa2.03□□□□□ -2.08
UBX3YDL091C RPL35AP0CX84 120 aaKnown RBP2.03□□□□□ -2.08
UBX3YDL091C RPL35BP0CX85 120 aaKnown RBP2.03□□□□□ -2.08
UBX3YDL091C RSA4P25382 515 aaKnown RBP2.03□□□□□ -2.08
UBX3YDL091C UTR5P32630 166 aa2.03□□□□□ -2.08
UBX3YDL091C PTC1P35182 281 aa2.03□□□□□ -2.08
UBX3YDL091C GPX1P36014 167 aa2.03□□□□□ -2.08
UBX3YDL091C DRE2P36152 348 aa2.03□□□□□ -2.08
UBX3YDL091C SKG1P36169 355 aa2.03□□□□□ -2.08
UBX3YDL091C MRPL15P36523 253 aa2.03□□□□□ -2.08
UBX3YDL091C POP4P38336 279 aa2.03□□□□□ -2.08
UBX3YDL091C PHO89P38361 574 aa2.03□□□□□ -2.08
UBX3YDL091C URA8P38627 578 aaPredicted RBP2.03□□□□□ -2.08
UBX3YDL091C TRM5P38793 499 aa2.03□□□□□ -2.08
UBX3YDL091C SRP14P38985 146 aa2.03□□□□□ -2.08
UBX3YDL091C RMD6P39975 231 aa2.03□□□□□ -2.08
UBX3YDL091C YJR149WP47177 404 aa2.03□□□□□ -2.08
UBX3YDL091C PAC10P48363 199 aa2.03□□□□□ -2.08
UBX3YDL091C SOL1P50278 321 aa2.03□□□□□ -2.08
UBX3YDL091C NBP1P52919 319 aaPredicted RBP2.03□□□□□ -2.08
UBX3YDL091C NBP35P52920 328 aa2.03□□□□□ -2.08
UBX3YDL091C YGL185CP53100 379 aa2.03□□□□□ -2.08
UBX3YDL091C COG5P53951 403 aa2.03□□□□□ -2.08
UBX3YDL091C YDR114CQ04597 100 aa2.03□□□□□ -2.08
UBX3YDL091C YDR222WQ04925 415 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms