RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C SPC25P40014 221 aa1.85□□□□□ -2.11
BRE1YDL074C CCS1P40202 249 aaKnown RBP1.85□□□□□ -2.11
BRE1YDL074C XBP1P40489 647 aa1.85□□□□□ -2.11
BRE1YDL074C BUD8P41698 603 aa1.85□□□□□ -2.11
BRE1YDL074C AGX1P43567 385 aa1.85□□□□□ -2.11
BRE1YDL074C ECO1P43605 281 aa1.85□□□□□ -2.11
BRE1YDL074C DUG1P43616 481 aaKnown RBP1.85□□□□□ -2.11
BRE1YDL074C YFR054CP43622 192 aa1.85□□□□□ -2.11
BRE1YDL074C IKS1P47042 667 aa1.85□□□□□ -2.11
BRE1YDL074C MSY1P48527 492 aa1.85□□□□□ -2.11
BRE1YDL074C PUS4P48567 403 aaKnown RBP1.85□□□□□ -2.11
BRE1YDL074C GNP1P48813 663 aa1.85□□□□□ -2.11
BRE1YDL074C SOL1P50278 321 aa1.85□□□□□ -2.11
BRE1YDL074C YIP4P53093 235 aa1.85□□□□□ -2.11
BRE1YDL074C NSA1P53136 463 aaPredicted RBP1.85□□□□□ -2.11
BRE1YDL074C TYW3P53177 273 aa1.85□□□□□ -2.11
BRE1YDL074C YNR066CP53752 436 aa1.85□□□□□ -2.11
BRE1YDL074C CAF40P53829 373 aa1.85□□□□□ -2.11
BRE1YDL074C APJ1P53940 528 aa1.85□□□□□ -2.11
BRE1YDL074C DLT1Q04216 342 aa1.85□□□□□ -2.11
BRE1YDL074C FIT1Q04433 528 aa1.85□□□□□ -2.11
BRE1YDL074C ERP1Q05359 219 aaKnown RBP1.85□□□□□ -2.11
BRE1YDL074C HRI1Q05905 244 aaKnown RBP1.85□□□□□ -2.11
BRE1YDL074C YLR179CQ06252 201 aaKnown RBP1.85□□□□□ -2.11
BRE1YDL074C HEM25Q07534 307 aa1.85□□□□□ -2.11
BRE1YDL074C PAM18Q07914 168 aa1.85□□□□□ -2.11
BRE1YDL074C YPL272CQ08984 517 aa1.85□□□□□ -2.11
BRE1YDL074C YDL180WQ12301 547 aa1.85□□□□□ -2.11
BRE1YDL074C FRE7Q12333 620 aa1.85□□□□□ -2.11
BRE1YDL074C ATP14Q12349 124 aa1.85□□□□□ -2.11
BRE1YDL074C WHI5Q12416 295 aa1.85□□□□□ -2.11
BRE1YDL074C IZH2Q12442 317 aa1.85□□□□□ -2.11
BRE1YDL074C ERP4Q12450 207 aa1.85□□□□□ -2.11
BRE1YDL074C YLR365WQ7LIF2 110 aa1.85□□□□□ -2.11
BRE1YDL074C ATG40Q99325 256 aa1.85□□□□□ -2.11
BRE1YDL074C YPR117WQ06116 2489 aa1.85□□□□□ -2.11
BRE1YDL074C TPI1P00942 248 aaKnown RBP1.84□□□□□ -2.11
BRE1YDL074C MET3P08536 511 aa1.84□□□□□ -2.11
BRE1YDL074C RPS16AP0CX51 143 aaKnown RBP1.84□□□□□ -2.11
BRE1YDL074C RPS16BP0CX52 143 aaKnown RBP1.84□□□□□ -2.11
BRE1YDL074C SEC59P20048 519 aa1.84□□□□□ -2.11
BRE1YDL074C CNB1P25296 175 aa1.84□□□□□ -2.11
BRE1YDL074C NFS1P25374 497 aa1.84□□□□□ -2.11
BRE1YDL074C PEX4P29340 183 aa1.84□□□□□ -2.11
BRE1YDL074C ARO4P32449 370 aaKnown RBP1.84□□□□□ -2.11
BRE1YDL074C FAT1P38225 669 aa1.84□□□□□ -2.11
BRE1YDL074C AIM3P38266 947 aaKnown RBP1.84□□□□□ -2.11
BRE1YDL074C GPI16P38875 610 aa1.84□□□□□ -2.11
BRE1YDL074C YEA6P39953 335 aa1.84□□□□□ -2.11
BRE1YDL074C YEA4P40004 342 aa1.84□□□□□ -2.11
BRE1YDL074C MRX5P47007 382 aa1.84□□□□□ -2.11
BRE1YDL074C ADO1P47143 340 aaKnown RBP1.84□□□□□ -2.11
BRE1YDL074C SNN1P48232 102 aa1.84□□□□□ -2.11
BRE1YDL074C HNT2P49775 206 aa1.84□□□□□ -2.11
BRE1YDL074C SLX9P53251 210 aaPredicted RBP1.84□□□□□ -2.11
BRE1YDL074C HHO1P53551 258 aa1.84□□□□□ -2.11
BRE1YDL074C YDR102CQ03864 110 aa1.84□□□□□ -2.11
BRE1YDL074C THI74Q04083 370 aa1.84□□□□□ -2.11
BRE1YDL074C YDR391CQ04170 232 aa1.84□□□□□ -2.11
BRE1YDL074C DFG5Q05031 458 aa1.84□□□□□ -2.11
BRE1YDL074C UPS1Q05776 175 aa1.84□□□□□ -2.11
BRE1YDL074C GRC3Q07845 632 aa1.84□□□□□ -2.11
BRE1YDL074C HRD1Q08109 551 aa1.84□□□□□ -2.11
BRE1YDL074C YOR186WQ08560 144 aa1.84□□□□□ -2.11
BRE1YDL074C EAF3Q12432 401 aa1.84□□□□□ -2.11
BRE1YDL074C AGC1Q12482 902 aa1.84□□□□□ -2.11
BRE1YDL074C Q0144Q9ZZW2 109 aa1.84□□□□□ -2.11
BRE1YDL074C YDR157WA0A023PZE8 133 aa1.84□□□□□ -2.12
BRE1YDL074C IPP1P00817 287 aaKnown RBP1.84□□□□□ -2.12
BRE1YDL074C YML003WP0CF16 290 aa1.84□□□□□ -2.12
BRE1YDL074C STE4P18851 423 aa1.84□□□□□ -2.12
BRE1YDL074C MDH2P22133 377 aa1.84□□□□□ -2.12
BRE1YDL074C TIP1P27654 210 aaPredicted RBP1.84□□□□□ -2.12
BRE1YDL074C COQ2P32378 372 aa1.84□□□□□ -2.12
BRE1YDL074C GLC7P32598 312 aaKnown RBP1.84□□□□□ -2.12
BRE1YDL074C EMP24P32803 203 aaKnown RBP1.84□□□□□ -2.12
BRE1YDL074C REC114P32841 428 aa1.84□□□□□ -2.12
BRE1YDL074C VAM7P32912 316 aa1.84□□□□□ -2.12
BRE1YDL074C SRY1P36007 326 aa1.84□□□□□ -2.12
BRE1YDL074C YKL162CP36052 402 aa1.84□□□□□ -2.12
BRE1YDL074C MRPL4P36517 319 aa1.84□□□□□ -2.12
BRE1YDL074C ATP3P38077 311 aaKnown RBP1.84□□□□□ -2.12
BRE1YDL074C RIB5P38145 238 aa1.84□□□□□ -2.12
BRE1YDL074C NTC20P38302 140 aaPredicted RBP1.84□□□□□ -2.12
BRE1YDL074C SLM6P38343 150 aa1.84□□□□□ -2.12
BRE1YDL074C POP2P39008 433 aa1.84□□□□□ -2.12
BRE1YDL074C PEX7P39108 375 aa1.84□□□□□ -2.12
BRE1YDL074C YER158CP40095 573 aa1.84□□□□□ -2.12
BRE1YDL074C QRI1P43123 477 aaKnown RBP1.84□□□□□ -2.12
BRE1YDL074C SMD3P43321 101 aaKnown RBP1.84□□□□□ -2.12
BRE1YDL074C MCM22P47167 239 aa1.84□□□□□ -2.12
BRE1YDL074C UBP8P50102 471 aa1.84□□□□□ -2.12
BRE1YDL074C YGL117WP53133 265 aa1.84□□□□□ -2.12
BRE1YDL074C PEF1P53238 335 aa1.84□□□□□ -2.12
BRE1YDL074C FMP41P53889 259 aaKnown RBP1.84□□□□□ -2.12
BRE1YDL074C BUD25P85052 153 aa1.84□□□□□ -2.12
BRE1YDL074C VPS28Q02767 242 aa1.84□□□□□ -2.12
BRE1YDL074C YDC1Q02896 317 aa1.84□□□□□ -2.12
BRE1YDL074C ODC1Q03028 310 aa1.84□□□□□ -2.12
BRE1YDL074C YDR209CQ03480 137 aa1.84□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms