RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C IPP1P00817 287 aaKnown RBP2.9□□□□□ -1.95
YPK3YBR028C CBF1P17106 351 aa2.9□□□□□ -1.95
YPK3YBR028C STE18P18852 110 aa2.9□□□□□ -1.95
YPK3YBR028C SCO1P23833 295 aa2.9□□□□□ -1.95
YPK3YBR028C CTR2P38865 189 aa2.9□□□□□ -1.95
YPK3YBR028C YIL001WP40560 513 aa2.9□□□□□ -1.95
YPK3YBR028C MRPL49P40858 161 aaPredicted RBP2.9□□□□□ -1.95
YPK3YBR028C YRB1P41920 201 aaKnown RBP2.9□□□□□ -1.95
YPK3YBR028C GTR2P53290 341 aa2.9□□□□□ -1.95
YPK3YBR028C RGM1Q00453 211 aa2.9□□□□□ -1.95
YPK3YBR028C BRX1Q08235 291 aaKnown RBP2.9□□□□□ -1.95
YPK3YBR028C Q0255P03881 472 aa2.89□□□□□ -1.95
YPK3YBR028C CDC33P07260 213 aaKnown RBP2.89□□□□□ -1.95
YPK3YBR028C YHR032W-AP0C5N6 59 aa2.89□□□□□ -1.95
YPK3YBR028C SIR4P11978 1358 aa2.89□□□□□ -1.95
YPK3YBR028C YMR31P19955 123 aa2.89□□□□□ -1.95
YPK3YBR028C PRP18P33411 251 aaPredicted RBP2.89□□□□□ -1.95
YPK3YBR028C YHR125WP38831 101 aa2.89□□□□□ -1.95
YPK3YBR028C PEX17P40155 199 aa2.89□□□□□ -1.95
YPK3YBR028C ARC15P40518 154 aaRIP-Chip data2.89□□□□□ -1.95not detected
YPK3YBR028C CAT5P41735 233 aa2.89□□□□□ -1.95
YPK3YBR028C RPA43P46669 326 aa2.89□□□□□ -1.95
YPK3YBR028C COS6P53344 381 aa2.89□□□□□ -1.95
YPK3YBR028C CDD1Q06549 142 aa2.89□□□□□ -1.95
YPK3YBR028C NCB2Q92317 146 aa2.89□□□□□ -1.95
YPK3YBR028C FKS1P38631 1876 aaKnown RBP2.88□□□□□ -1.95
YPK3YBR028C DSF1P0CX08 502 aa2.88□□□□□ -1.95
YPK3YBR028C YNR073CP0CX09 502 aa2.88□□□□□ -1.95
YPK3YBR028C CBT1P36038 271 aaPredicted RBP2.88□□□□□ -1.95
YPK3YBR028C RIB1P38066 345 aa2.88□□□□□ -1.95
YPK3YBR028C MAK5P38112 773 aaPredicted RBP2.88□□□□□ -1.95
YPK3YBR028C YHL026CP38740 315 aa2.88□□□□□ -1.95
YPK3YBR028C COX15P40086 486 aa2.88□□□□□ -1.95
YPK3YBR028C SPT3P06844 337 aa2.87□□□□□ -1.95
YPK3YBR028C CCA1P21269 546 aa2.87□□□□□ -1.95
YPK3YBR028C SCM4P32564 187 aa2.87□□□□□ -1.95
YPK3YBR028C YPT52P36018 234 aaKnown RBP2.87□□□□□ -1.95
YPK3YBR028C PRM15Q03262 622 aa2.87□□□□□ -1.95
YPK3YBR028C CDC123Q05791 360 aa2.87□□□□□ -1.95
YPK3YBR028C NIP7Q08962 181 aaKnown RBP2.87□□□□□ -1.95
YPK3YBR028C TPO4Q12256 659 aa2.87□□□□□ -1.95
YPK3YBR028C YKL183C-AQ3E765 70 aa2.87□□□□□ -1.95
YPK3YBR028C HTL1Q9URQ5 78 aa2.87□□□□□ -1.95
YPK3YBR028C MIC26P50087 233 aa2.87□□□□□ -1.95
YPK3YBR028C NSA1P53136 463 aaPredicted RBP2.87□□□□□ -1.95
YPK3YBR028C YPL257WQ08974 193 aa2.87□□□□□ -1.95
YPK3YBR028C FBA1P14540 359 aaKnown RBP2.86□□□□□ -1.95
YPK3YBR028C SNF6P18888 332 aa2.86□□□□□ -1.95
YPK3YBR028C ADE1P27616 306 aa2.86□□□□□ -1.95
YPK3YBR028C SRY1P36007 326 aa2.86□□□□□ -1.95
YPK3YBR028C RPF1P38805 295 aaKnown RBP2.86□□□□□ -1.95
YPK3YBR028C ERG28P40030 148 aa2.86□□□□□ -1.95
YPK3YBR028C PRE6P40303 254 aaKnown RBP2.86□□□□□ -1.95
YPK3YBR028C SNX4P47057 423 aa2.86□□□□□ -1.95
YPK3YBR028C ALG13P53178 202 aa2.86□□□□□ -1.95
YPK3YBR028C ERV29P53337 310 aa2.86□□□□□ -1.95
YPK3YBR028C ABP140Q08641 628 aaKnown RBP2.86□□□□□ -1.95
YPK3YBR028C GPM2Q12008 311 aa2.86□□□□□ -1.95
YPK3YBR028C YBR121C-AP0C5L4 52 aa2.85□□□□□ -1.95
YPK3YBR028C IDH1P28834 360 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
YPK3YBR028C ERG10P41338 398 aaKnown RBP2.85□□□□□ -1.95
YPK3YBR028C GET1P53192 235 aa2.85□□□□□ -1.95
YPK3YBR028C HTB1P02293 131 aaKnown RBP2.84□□□□□ -1.95
YPK3YBR028C HTB2P02294 131 aa2.84□□□□□ -1.95
YPK3YBR028C RPL35AP0CX84 120 aaKnown RBP2.84□□□□□ -1.95
YPK3YBR028C RPL35BP0CX85 120 aaKnown RBP2.84□□□□□ -1.95
YPK3YBR028C UBC6P33296 250 aaPredicted RBP2.84□□□□□ -1.95
YPK3YBR028C POP7P38291 140 aa2.84□□□□□ -1.95
YPK3YBR028C YNL194CP40169 301 aa2.84□□□□□ -1.95
YPK3YBR028C FIS1P40515 155 aa2.84□□□□□ -1.95
YPK3YBR028C ILM1P47155 203 aa2.84□□□□□ -1.95
YPK3YBR028C YMR279CQ03263 540 aa2.84□□□□□ -1.95
YPK3YBR028C CGI121Q03705 181 aaKnown RBP2.84□□□□□ -1.95
YPK3YBR028C TRM5P38793 499 aa2.83□□□□□ -1.96
YPK3YBR028C TMA22P47089 198 aaPredicted RBP2.83□□□□□ -1.96
YPK3YBR028C CWC23P52868 283 aaPredicted RBP2.83□□□□□ -1.96
YPK3YBR028C SPC2Q04969 178 aa2.83□□□□□ -1.96
YPK3YBR028C AKR2Q12013 749 aa2.83□□□□□ -1.96
YPK3YBR028C URA6P15700 204 aa2.83□□□□□ -1.96
YPK3YBR028C YJR056CP47115 236 aa2.83□□□□□ -1.96
YPK3YBR028C NOP19P53317 196 aaPredicted RBP2.83□□□□□ -1.96
YPK3YBR028C ATG39Q06159 398 aa2.83□□□□□ -1.96
YPK3YBR028C GRE1Q08969 168 aa2.83□□□□□ -1.96
YPK3YBR028C DCN1Q12395 269 aa2.83□□□□□ -1.96
YPK3YBR028C EMC6Q12431 108 aa2.83□□□□□ -1.96
YPK3YBR028C YOR020W-AQ3E824 90 aa2.83□□□□□ -1.96
YPK3YBR028C SSO1P32867 290 aa2.82□□□□□ -1.96
YPK3YBR028C ECM33P38248 429 aaKnown RBP2.82□□□□□ -1.96
YPK3YBR028C YGR026WP53217 278 aa2.82□□□□□ -1.96
YPK3YBR028C YML096WQ04489 525 aa2.82□□□□□ -1.96
YPK3YBR028C QCR7P00128 127 aa2.81□□□□□ -1.96
YPK3YBR028C QCR2P07257 368 aa2.81□□□□□ -1.96
YPK3YBR028C FCY2P17064 533 aa2.81□□□□□ -1.96
YPK3YBR028C TAF14P35189 244 aa2.81□□□□□ -1.96
YPK3YBR028C YOR062CP36025 268 aa2.81□□□□□ -1.96
YPK3YBR028C FES1P38260 290 aa2.81□□□□□ -1.96
YPK3YBR028C AME1P38313 324 aa2.81□□□□□ -1.96
YPK3YBR028C YAR068WP39564 161 aa2.81□□□□□ -1.96
YPK3YBR028C DAN1P47178 298 aa2.81□□□□□ -1.96
YPK3YBR028C BRR6P53062 197 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms