RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 PARVAQ9NVD7 372 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 RIC1Q4ADV7 1423 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 CFAP73A6NFT4 308 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 CALB1P05937 261 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 YY1P25490 414 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 CBWD6Q4V339 395 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 CBWD3Q5JTY5 395 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 RABGAP1LQ5R372 815 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 CBWD5Q5RIA9 395 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 RGS9BPQ6ZS82 235 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 LRRC55Q6ZSA7 311 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 ZNF720Q7Z2F6 126 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 MYLK4Q86YV6 388 aaPredicted RBP14.64□□□□□ -0.07
MUC1-223ENST00000611571 CAVIN3Q969G5 261 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 KLC2Q9H0B6 622 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 PCDHAC2Q9Y5I4 1007 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 SPECC1L-ADORA2AF8WAN1 911 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 LDHAP00338 332 aaKnown RBP14.64□□□□□ -0.07
MUC1-223ENST00000611571 RFC1P35251 1148 aaPredicted RBP14.64□□□□□ -0.07
MUC1-223ENST00000611571 DAB2IPQ5VWQ8 1189 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 DPP9Q86TI2 863 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 LRRC71Q8N4P6 559 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 ACTRT1Q8TDG2 376 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 PSPC1Q8WXF1 523 aaKnown RBP14.64□□□□□ -0.07
MUC1-223ENST00000611571 TATDN2Q93075 761 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 SNX25Q9H3E2 840 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 SUFUQ9UMX1 484 aa14.64□□□□□ -0.07
MUC1-223ENST00000611571 KRT38O76015 456 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 HSPA4LO95757 839 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 BRD2P25440 801 aaKnown RBP14.63□□□□□ -0.07
MUC1-223ENST00000611571 CIITAP33076 1130 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 RUBCNQ92622 972 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 HAS1Q92839 578 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 JPH1Q9HDC5 661 aaPredicted RBP14.63□□□□□ -0.07
MUC1-223ENST00000611571 AIPL1Q9NZN9 384 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 PCDHB2Q9Y5E7 798 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 hCG_2014768A0A024R1R8 64 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 KRT4P19013 534 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 PGM1P36871 562 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 AARSP49588 968 aaKnown RBP eCLIP14.63□□□□□ -0.07
MUC1-223ENST00000611571 FOXD4Q12950 439 aaPredicted RBP14.63□□□□□ -0.07
MUC1-223ENST00000611571 MAP7Q14244 749 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.63□□□□□ -0.07
MUC1-223ENST00000611571 TMC3Q7Z5M5 1100 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 MXRA8Q9BRK3 442 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 SHBGP04278 402 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 RBP3P10745 1247 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 GTF2H1P32780 548 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 GARSP41250 739 aaKnown RBP14.63□□□□□ -0.07
MUC1-223ENST00000611571 RPL21P46778 160 aaKnown RBP14.63□□□□□ -0.07
MUC1-223ENST00000611571 MARCKSL1P49006 195 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 ECM1Q16610 540 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 DUOXA2Q1HG44 320 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 SHROOM1Q2M3G4 852 aaPredicted RBP14.63□□□□□ -0.07
MUC1-223ENST00000611571 ATG16L1Q676U5 607 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 BAP1Q92560 729 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 ABTB1Q969K4 478 aaPredicted RBP14.63□□□□□ -0.07
MUC1-223ENST00000611571 APOBEC2Q9Y235 224 aaKnown RBP14.63□□□□□ -0.07
MUC1-223ENST00000611571 NWD1Q149M9 1564 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 KCNN4O15554 427 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 CYP11B1P15538 503 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 SDC4P31431 198 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 TFDP2Q14188 446 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 PWWP2AQ96N64 755 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 ACAP3Q96P50 834 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 VCPKMTQ9H867 229 aa14.63□□□□□ -0.07
MUC1-223ENST00000611571 KLHL8Q9P2G9 620 aaPredicted RBP14.63□□□□□ -0.07
MUC1-223ENST00000611571 NFIBO00712 420 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 ART3Q13508 389 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 FAM71DQ8N9W8 422 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 C1orf131Q8NDD1 294 aaKnown RBP14.62□□□□□ -0.07
MUC1-223ENST00000611571 TTC25Q96NG3 672 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 CTNNAL1Q9UBT7 734 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 AFF2P51816 1311 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 MYO5BQ9ULV0 1848 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 CSDE1O75534 798 aaKnown RBP14.62□□□□□ -0.07
MUC1-223ENST00000611571 GGPS1O95749 300 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 ADORA2BP29275 332 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 SHMT1P34896 483 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 RWDD4Q6NW29 188 aaKnown RBP14.62□□□□□ -0.07
MUC1-223ENST00000611571 C4orf50Q6ZRC1 276 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 PRUNE1Q86TP1 453 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 NT5DC3Q86UY8 548 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 TRIM42Q8IWZ5 723 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 AFAP1L2Q8N4X5 818 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 RMDN2Q96LZ7 410 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 MKNK1Q9BUB5 465 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 C10orf88Q9H8K7 445 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 HERC5Q9UII4 1024 aaKnown RBP14.62□□□□□ -0.07
MUC1-223ENST00000611571 ANP32DO95626 131 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 PDGFRAP16234 1089 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 RFX1P22670 979 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 SMARCA1P28370 1054 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 SFNP31947 248 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 FLT3P36888 993 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 GPC3P51654 580 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 STRIP1Q5VSL9 837 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 GPAT2Q6NUI2 795 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 HHIPL2Q6UWX4 724 aa14.62□□□□□ -0.07
MUC1-223ENST00000611571 ARHGEF19Q8IW93 802 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms