RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 PLS3P13797 630 aa23.18■■□□□ 1.3
PPFIA3-209ENST00000602783 SMTNP53814 917 aa23.18■■□□□ 1.3
PPFIA3-209ENST00000602783 SLC12A3P55017 1021 aa23.18■■□□□ 1.3
PPFIA3-209ENST00000602783 ANGPT1Q15389 498 aa23.18■■□□□ 1.3
PPFIA3-209ENST00000602783 ASCL5Q7RTU5 278 aa23.18■■□□□ 1.3
PPFIA3-209ENST00000602783 FRMD5Q7Z6J6 570 aa23.18■■□□□ 1.3
PPFIA3-209ENST00000602783 SLC2A4RGQ9NR83 387 aa23.18■■□□□ 1.3
PPFIA3-209ENST00000602783 CNTN3Q9P232 1028 aa23.18■■□□□ 1.3
PPFIA3-209ENST00000602783 DNMT3BQ9UBC3 853 aaKnown RBP23.18■■□□□ 1.3
PPFIA3-209ENST00000602783 RIF1Q5UIP0 2472 aaKnown RBP23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 POU2F2P09086 479 aa23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 PDCP20941 246 aa23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 GPC5P78333 572 aa23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 SF3A1Q15459 793 aaKnown RBP23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 PABPC1LQ4VXU2 614 aaKnown RBP23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 SEZ6Q53EL9 994 aa23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 RTL10Q7L3V2 364 aa23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 TMEM161BQ8NDZ6 487 aa23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 C18orf25Q96B23 403 aaPredicted RBP23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 ARHGEF3Q9NR81 526 aa23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 ANKFY1Q9P2R3 1169 aa23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 NUB1Q9Y5A7 615 aa23.17■■□□□ 1.3
PPFIA3-209ENST00000602783 MEFVO15553 781 aaPredicted RBP23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 TOM1L1O75674 476 aa23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 RPL9P32969 192 aaKnown RBP23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 ARPP19P56211 112 aa23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 ROR1Q01973 937 aa23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 GRIN1Q05586 938 aa23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 VARS2Q5ST30 1063 aaKnown RBP23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 MTSS1LQ765P7 747 aa23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 ZNF461Q8TAF7 563 aa23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 KCND2Q9NZV8 630 aa23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 MYO15AQ9UKN7 3530 aa23.16■■□□□ 1.3
PPFIA3-209ENST00000602783 NPHP3-ACAD11A0A0J9YXS1 232 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 PRR23AA6NEV1 266 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 SYN3O14994 580 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 SLC26A4O43511 780 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 MAPTP10636 758 aaKnown RBP23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 ELF1P32519 619 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 UBA7P41226 1012 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 CACNB1Q02641 598 aaPredicted RBP23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 NOLC1Q14978 699 aaKnown RBP eCLIP23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 SLC10A6Q3KNW5 377 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 SPECC1Q5M775 1068 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 SLC8B1Q6J4K2 584 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 PHLDB3Q6NSJ2 640 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 LRRC15Q8TF66 581 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 NKD2Q969F2 451 aaPredicted RBP23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 CALML4Q96GE6 196 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 KCNH3Q9ULD8 1083 aa23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 MRPS23Q9Y3D9 190 aaKnown RBP23.15■■□□□ 1.3
PPFIA3-209ENST00000602783 CFAP54Q96N23 3096 aa23.14■■□□□ 1.29
PPFIA3-209ENST00000602783 CLDN3O15551 220 aa23.14■■□□□ 1.29
PPFIA3-209ENST00000602783 ABLIM3O94929 683 aa23.14■■□□□ 1.29
PPFIA3-209ENST00000602783 DCNP07585 359 aaKnown RBP23.14■■□□□ 1.29
PPFIA3-209ENST00000602783 LONP1P36776 959 aaKnown RBP23.14■■□□□ 1.29
PPFIA3-209ENST00000602783 MATR3P43243 847 aaKnown RBP eCLIP23.14■■□□□ 1.29
PPFIA3-209ENST00000602783 ZPBP2Q6X784 338 aa23.14■■□□□ 1.29
PPFIA3-209ENST00000602783 ING5Q8WYH8 240 aa23.14■■□□□ 1.29
PPFIA3-209ENST00000602783 SIT1Q9Y3P8 196 aa23.14■■□□□ 1.29
PPFIA3-209ENST00000602783 NOTCH4Q99466 2003 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 VPS13AQ96RL7 3174 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 WDR27A2RRH5 827 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 H7C4K7 107 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 PRRG1O14668 218 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 TBC1D4O60343 1298 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 LRG1P02750 347 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 RHOP08100 348 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 PLCG1P19174 1290 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 SYT1P21579 422 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 RESTQ13127 1097 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 MRPL58Q14197 206 aaKnown RBP23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 KARSQ15046 597 aaKnown RBP23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 ARSHQ5FYA8 562 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 GPBP1Q86WP2 473 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 NPAS3Q8IXF0 933 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 RASSF8Q8NHQ8 419 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 KXD1Q9BQD3 176 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 LARSQ9P2J5 1176 aaKnown RBP23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 FAM186AA6NE01 2351 aa23.13■■□□□ 1.29
PPFIA3-209ENST00000602783 ARHGEF37A1IGU5 675 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 ATF2P15336 505 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 PTPN2P17706 415 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 MCM4P33991 863 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 MCL1Q07820 350 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 DHX8Q14562 1220 aaKnown RBP23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 CTXN3Q4LDR2 81 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 MCRS1Q96EZ8 462 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 BICD1Q96G01 975 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 SHDQ96IW2 340 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 SUSD3Q96L08 255 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 REEP2Q9BRK0 252 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 CYP4F11Q9HBI6 524 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 FOXD4L1Q9NU39 408 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 BLOC1S4Q9NUP1 217 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 FBXL5Q9UKA1 691 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 CLIC4Q9Y696 253 aa23.12■■□□□ 1.29
PPFIA3-209ENST00000602783 CXCL8P10145 99 aa23.11■■□□□ 1.29
PPFIA3-209ENST00000602783 NCKAP1LP55160 1127 aa23.11■■□□□ 1.29
PPFIA3-209ENST00000602783 STARD6P59095 220 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms