RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 ATP2C1P98194 919 aaPredicted RBP14.35□□□□□ -0.11
SPG7-221ENST00000569720 PFKPQ01813 784 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 SOX4Q06945 474 aaPredicted RBP14.35□□□□□ -0.11
SPG7-221ENST00000569720 RAD51AP2Q09MP3 1159 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 MAPK7Q13164 816 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 NOLC1Q14978 699 aaKnown RBP eCLIP14.35□□□□□ -0.11
SPG7-221ENST00000569720 SPECC1Q5M775 1068 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 VARS2Q5ST30 1063 aaKnown RBP14.35□□□□□ -0.11
SPG7-221ENST00000569720 HYIQ5T013 277 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 CD300LGQ6UXG3 332 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 RSPO2Q6UXX9 243 aaPredicted RBP14.35□□□□□ -0.11
SPG7-221ENST00000569720 KCNK18Q7Z418 384 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 ST13P5Q8NFI4 369 aaPredicted RBP14.35□□□□□ -0.11
SPG7-221ENST00000569720 ZNF461Q8TAF7 563 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 ITFG1Q8TB96 612 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 MMTAG2Q9BU76 263 aaKnown RBP14.35□□□□□ -0.11
SPG7-221ENST00000569720 HCFC1R1Q9NWW0 138 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 KCND2Q9NZV8 630 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 CNTN3Q9P232 1028 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 DNMT3BQ9UBC3 853 aaKnown RBP14.35□□□□□ -0.11
SPG7-221ENST00000569720 MRPS23Q9Y3D9 190 aaKnown RBP14.35□□□□□ -0.11
SPG7-221ENST00000569720 SPTBN4Q9H254 2564 aa14.35□□□□□ -0.11
SPG7-221ENST00000569720 VPS13AQ96RL7 3174 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 VWA3AA6NCI4 1184 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 H0YCG3 227 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 TOM1L1O75674 476 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 DCNP07585 359 aaKnown RBP14.34□□□□□ -0.11
SPG7-221ENST00000569720 PDIA4P13667 645 aaKnown RBP14.34□□□□□ -0.11
SPG7-221ENST00000569720 PTPN2P17706 415 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 IGFBP6P24592 240 aaPredicted RBP14.34□□□□□ -0.11
SPG7-221ENST00000569720 MATR3P43243 847 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPG7-221ENST00000569720 STARD6P59095 220 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 GPC5P78333 572 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 ROR1Q01973 937 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 SLC8B1Q6J4K2 584 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 SYT2Q8N9I0 419 aaPredicted RBP14.34□□□□□ -0.11
SPG7-221ENST00000569720 APPL2Q8NEU8 664 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 ZMAT2Q96NC0 199 aaKnown RBP14.34□□□□□ -0.11
SPG7-221ENST00000569720 RPP25Q9BUL9 199 aaKnown RBP14.34□□□□□ -0.11
SPG7-221ENST00000569720 SEMA4AQ9H3S1 761 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 GDE1Q9NZC3 331 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 LARSQ9P2J5 1176 aaKnown RBP14.34□□□□□ -0.11
SPG7-221ENST00000569720 ANKFY1Q9P2R3 1169 aa14.34□□□□□ -0.11
SPG7-221ENST00000569720 ARHGEF37A1IGU5 675 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 ABLIM1O14639 778 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 CLDN3O15551 220 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 ABLIM3O94929 683 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 RHOP08100 348 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 MCM4P33991 863 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 ARPP19P56211 112 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 PRKCQQ04759 706 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 MLF2Q15773 248 aaPredicted RBP14.33□□□□□ -0.12
SPG7-221ENST00000569720 ARL6IP4Q66PJ3 421 aaKnown RBP14.33□□□□□ -0.12
SPG7-221ENST00000569720 TPGS2Q68CL5 300 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 ZNF280DQ6N043 979 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 ZC3H14Q6PJT7 736 aaKnown RBP14.33□□□□□ -0.12
SPG7-221ENST00000569720 ZPBP2Q6X784 338 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 HSCBQ8IWL3 235 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 NPAS3Q8IXF0 933 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 ELMOD1Q8N336 334 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 TMEM161BQ8NDZ6 487 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 PJA1Q8NG27 643 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 KCNG4Q8TDN1 519 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 ING5Q8WYH8 240 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 BICD1Q96G01 975 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 ZBTB45Q96K62 511 aaPredicted RBP14.33□□□□□ -0.12
SPG7-221ENST00000569720 PNMA5Q96PV4 448 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 PLIN2Q99541 437 aa14.33□□□□□ -0.12
SPG7-221ENST00000569720 AVENQ9NQS1 362 aaPredicted RBP14.33□□□□□ -0.12
SPG7-221ENST00000569720 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.33□□□□□ -0.12
SPG7-221ENST00000569720 WDR87Q6ZQQ6 2873 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 KANSL1LA0AUZ9 987 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 WDR27A2RRH5 827 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 ZNF197O14709 1029 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 SLC26A4O43511 780 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 PLA2G4BP0C869 781 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 MAPTP10636 758 aaKnown RBP14.32□□□□□ -0.12
SPG7-221ENST00000569720 ATF2P15336 505 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 GJB2P29033 226 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 MARCKSP29966 332 aaPredicted RBP14.32□□□□□ -0.12
SPG7-221ENST00000569720 SNW1Q13573 536 aaKnown RBP14.32□□□□□ -0.12
SPG7-221ENST00000569720 KYAT1Q16773 422 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 CTXN3Q4LDR2 81 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 SLC44A4Q53GD3 710 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 C1orf210Q8IVY1 113 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 TCEAL8Q8IYN2 117 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 ADSSL1Q8N142 457 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 C18orf25Q96B23 403 aaPredicted RBP14.32□□□□□ -0.12
SPG7-221ENST00000569720 MCRS1Q96EZ8 462 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 CALML4Q96GE6 196 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 TMX3Q96JJ7 454 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 SUSD3Q96L08 255 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 AK8Q96MA6 479 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 KXD1Q9BQD3 176 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 FOXQ1Q9C009 403 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 CYP4F11Q9HBI6 524 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 FBXL5Q9UKA1 691 aa14.32□□□□□ -0.12
SPG7-221ENST00000569720 FANCMQ8IYD8 2048 aa14.31□□□□□ -0.12
SPG7-221ENST00000569720 K7ELQ4 463 aaPredicted RBP14.31□□□□□ -0.12
SPG7-221ENST00000569720 TBC1D4O60343 1298 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms