RNA–Protein interactions for RNA: ENST00000557890.1

CYFIP1-201, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 2

Gene CYFIP1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-201ENST00000557890 CCDC13Q8IYE1 715 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 SRBD1Q8N5C6 995 aaKnown RBP6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 TOP6BLQ8N6T0 577 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 NEK9Q8TD19 979 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 CTNNBL1Q8WYA6 563 aaPredicted RBP6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 RAD54LQ92698 747 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 CYFIP2Q96F07 1278 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 PLPPR2Q96GM1 343 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 FBXL18Q96ME1 805 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 FMO2Q99518 471 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 TUBB6Q9BUF5 446 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 TMEM109Q9BVC6 243 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 FOXP3Q9BZS1 431 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 TRIM6Q9C030 488 aaPredicted RBP6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 CARD9Q9H257 536 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 EHMT1Q9H9B1 1298 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 FAM207AQ9NSI2 230 aaPredicted RBP6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 AGPAT5Q9NUQ2 364 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 ARHGAP20Q9P2F6 1191 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 HDAC6Q9UBN7 1215 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 CTNNAL1Q9UBT7 734 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 NFU1Q9UMS0 254 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 PCDHA6Q9UN73 950 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 RPL26L1Q9UNX3 145 aaKnown RBP6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 PCDHB5Q9Y5E4 795 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 PCDHA8Q9Y5H6 950 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 MYH1P12882 1939 aa6.34□□□□□ -1.39
CYFIP1-201ENST00000557890 KCNK3O14649 394 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 TBX3O15119 743 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 RGS16O15492 202 aaPredicted RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 SORBS3O60504 671 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 SRGAP2O75044 1071 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 RASSF9O75901 435 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 AFPP02771 609 aaKnown RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 KRT18P05783 430 aaKnown RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 NUDT17P0C025 328 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 ZNF16P17020 682 aaPredicted RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 ALDH3A1P30838 453 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 HIBADHP31937 336 aaKnown RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 CHRNA3P32297 505 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 ABCD1P33897 745 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 CETN2P41208 172 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 STAT1P42224 750 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 MATR3P43243 847 aaKnown RBP eCLIP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 RNASELQ05823 741 aaKnown RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 IFT88Q13099 833 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 PDCLQ13371 301 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 ALCAMQ13740 583 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 RAPGEF1Q13905 1077 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 LETM2Q2VYF4 491 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 KRT71Q3SY84 523 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 MIIPQ5JXC2 388 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 HYIQ5T013 277 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 GPATCH4Q5T3I0 446 aaKnown RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 SEL1L2Q5TEA6 688 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 KLHDC7AQ5VTJ3 777 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 NFRKBQ6P4R8 1299 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 ZNF804AQ7Z570 1209 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 USP37Q86T82 979 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 COL23A1Q86Y22 540 aaPredicted RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 RASGEF1CQ8N431 466 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 RIBC1Q8N443 379 aaPredicted RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 MIGA1Q8NAN2 632 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 SLC17A8Q8NDX2 589 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 GRK7Q8WTQ7 553 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 UBLCP1Q8WVY7 318 aaPredicted RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 CUL5Q93034 780 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 CRELD1Q96HD1 420 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 KRT12Q99456 494 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 TLR10Q9BXR5 811 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 WNT10AQ9GZT5 417 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 CCDC134Q9H6E4 229 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 RBM12Q9NTZ6 932 aaKnown RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 USP40Q9NVE5 1235 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 MCM9Q9NXL9 1143 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 SEL1LQ9UBV2 794 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 VTI1BQ9UEU0 232 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 ARMCX3Q9UH62 379 aaPredicted RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 THRAP3Q9Y2W1 955 aaKnown RBP6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 TOGARAM1Q9Y4F4 1720 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 ZNF831Q5JPB2 1677 aa6.33□□□□□ -1.4
CYFIP1-201ENST00000557890 ATAD5Q96QE3 1844 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 PRAMEF27A3QJZ7 478 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 TRIM49BA6NDI0 452 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 SMCO2A6NFE2 343 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 KLRF2D3W0D1 207 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 STXBP3O00186 592 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 PDXKO00764 312 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 PPP1R12AO14974 1030 aaPredicted RBP6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 CEP104O60308 925 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 PRDM1O75626 825 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 PALMO75781 387 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 FOSP01100 380 aaPredicted RBP6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 MYBP10242 640 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 CCND1P24385 295 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 CDK8P49336 464 aa6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 HADHBP55084 474 aaKnown RBP6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 SNRPFP62306 86 aaKnown RBP6.32□□□□□ -1.4
CYFIP1-201ENST00000557890 TFAP4Q01664 338 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms