RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 WASHC2CQ9Y4E1 1318 aa4.63□□□□□ -1.67
USP48-215ENST00000534705 ZMYM3Q14202 1370 aa4.63□□□□□ -1.67
USP48-215ENST00000534705 UACAQ9BZF9 1416 aa4.63□□□□□ -1.67
USP48-215ENST00000534705 KLHL33A6NCF5 533 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 TBKBP1A7MCY6 615 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 ADCY6O43306 1168 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 RECQL4O94761 1208 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 MT-CO1P00395 513 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 MYBL2P10244 700 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 ADSLP30566 484 aaPredicted RBP4.62□□□□□ -1.67
USP48-215ENST00000534705 TIGD2Q4W5G0 525 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 PGM2L1Q6PCE3 622 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 DRC7Q8IY82 874 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 PQLC1Q8N2U9 271 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 JADE3Q92613 823 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 FUBP3Q96I24 572 aaKnown RBP eCLIP4.62□□□□□ -1.67
USP48-215ENST00000534705 DCLRE1CQ96SD1 692 aaKnown RBP4.62□□□□□ -1.67
USP48-215ENST00000534705 UHRF1Q96T88 793 aaPredicted RBP4.62□□□□□ -1.67
USP48-215ENST00000534705 NDC1Q9BTX1 674 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 ASPSCR1Q9BZE9 553 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 HOMER2Q9NSB8 354 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 PCDHGA2Q9Y5H1 932 aa4.62□□□□□ -1.67
USP48-215ENST00000534705 ABCA9Q8IUA7 1624 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 CXorf49A8MYA2 514 aaPredicted RBP4.61□□□□□ -1.67
USP48-215ENST00000534705 NDUFS2O75306 463 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 NCLP19338 710 aaKnown RBP4.61□□□□□ -1.67
USP48-215ENST00000534705 HK1P19367 917 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 PTPN7P35236 360 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 SLC6A9P48067 706 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 USP14P54578 494 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 PER3P56645 1201 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 CLRN1P58418 232 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 SEPT2Q15019 361 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 NOMO1Q15155 1222 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 CLUL1Q15846 466 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 RRP12Q5JTH9 1297 aaKnown RBP4.61□□□□□ -1.67
USP48-215ENST00000534705 OTUD7BQ6GQQ9 843 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 MIGA2Q7L4E1 593 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 SUPT20HQ8NEM7 779 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 OR10H5Q8NGA6 315 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 PUS7Q96PZ0 661 aaKnown RBP4.61□□□□□ -1.67
USP48-215ENST00000534705 SLC46A2Q9BY10 475 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 SENP6Q9GZR1 1112 aaPredicted RBP4.61□□□□□ -1.67
USP48-215ENST00000534705 TMEM140Q9NV12 185 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 TUBD1Q9UJT1 453 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 CHST2Q9Y4C5 530 aa4.61□□□□□ -1.67
USP48-215ENST00000534705 GAGE12BA1L429 117 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 GAGE12HA6NDE8 117 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 SGTAO43765 313 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 PCDHGA12O60330 932 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 GSPT1P15170 499 aaKnown RBP4.6□□□□□ -1.67
USP48-215ENST00000534705 C5AR1P21730 350 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 NR4A1P22736 598 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 CTGFP29279 349 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 ADKP55263 362 aaKnown RBP4.6□□□□□ -1.67
USP48-215ENST00000534705 FAM50AQ14320 339 aaKnown RBP4.6□□□□□ -1.67
USP48-215ENST00000534705 TMEM240Q5SV17 173 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 ANKS6Q68DC2 871 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 EFCAB12Q6NXP0 572 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 SEM1Q6ZVN7 128 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 XYLT1Q86Y38 959 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 REPS2Q8NFH8 660 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 TFAP2CQ92754 450 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 PGBD4Q96DM1 585 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 TEKT5Q96M29 485 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 C7orf25Q9BPX7 421 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 CCDC8Q9H0W5 538 aaPredicted RBP4.6□□□□□ -1.67
USP48-215ENST00000534705 SIK3Q9Y2K2 1263 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 INSL6Q9Y581 213 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 PCDHGA9Q9Y5G4 932 aaKnown RBP4.6□□□□□ -1.67
USP48-215ENST00000534705 PCDHGA8Q9Y5G5 932 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 PCDHGA7Q9Y5G6 932 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 PCDHGA6Q9Y5G7 932 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 PCDHGA3Q9Y5H0 932 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 ARHGAP35Q9NRY4 1499 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 EPRSP07814 1512 aaKnown RBP4.6□□□□□ -1.67
USP48-215ENST00000534705 KDM6BO15054 1643 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 CDC42BPBQ9Y5S2 1711 aa4.6□□□□□ -1.67
USP48-215ENST00000534705 hCG_2014768A0A024R1R8 64 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 XPOTO43592 962 aaKnown RBP4.59□□□□□ -1.67
USP48-215ENST00000534705 GPR32O75388 356 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 ATP10BO94823 1461 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 PCF11O94913 1555 aaKnown RBP4.59□□□□□ -1.67
USP48-215ENST00000534705 TNKSO95271 1327 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 ZSCAN20P17040 1043 aaPredicted RBP4.59□□□□□ -1.67
USP48-215ENST00000534705 LAG3P18627 525 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 CLK3P49761 638 aaKnown RBP4.59□□□□□ -1.67
USP48-215ENST00000534705 NUP153P49790 1475 aaKnown RBP4.59□□□□□ -1.67
USP48-215ENST00000534705 EVA1CP58658 441 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 ATP8B2P98198 1209 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 EXOSC10Q01780 885 aaKnown RBP4.59□□□□□ -1.67
USP48-215ENST00000534705 MTM1Q13496 603 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 ACAP2Q15057 778 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 ERCC6LQ2NKX8 1250 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 FHOD3Q2V2M9 1422 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 BRDTQ58F21 947 aaPredicted RBP4.59□□□□□ -1.67
USP48-215ENST00000534705 CDC42BPAQ5VT25 1732 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 SPATA31A6Q5VVP1 1343 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 AFMIDQ63HM1 303 aa4.59□□□□□ -1.67
USP48-215ENST00000534705 FBXO42Q6P3S6 717 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms