RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TNFRSF8P28908 595 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 DEUP1Q05D60 604 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 PTK7Q13308 1070 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 NFIXQ14938 502 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 TRIP10Q15642 601 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 MTRQ99707 1265 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 CTNNAL1Q9UBT7 734 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 XPO7Q9UIA9 1087 aaKnown RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 ZNF711Q9Y462 761 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 RIMS1Q86UR5 1692 aaKnown RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 PIK3R2O00459 728 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 CYTH3O43739 400 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 CCND2P30279 289 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 YWHABP31946 246 aaKnown RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 NPEPPSP55786 919 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 STX1BP61266 288 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 TFDP2Q14188 446 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 SMTNL2Q2TAL5 461 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 ZNF699Q32M78 642 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 FSCBQ5H9T9 825 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 OLFML2BQ68BL8 750 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 PDZD4Q76G19 769 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 IQCKQ8N0W5 287 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 NLRP4Q96MN2 994 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 MKNK1Q9BUB5 465 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 RBAKQ9NYW8 714 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 NAALADL1Q9UQQ1 740 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 A0A0A6YYK5 440 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 WTIPA6NIX2 430 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 O00370 1275 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 RAD17O75943 681 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 KRT7P08729 469 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 KRT10P13645 584 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 CDH6P55285 790 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 TMEM259Q4ZIN3 620 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 SWSAP1Q6NVH7 229 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 SLC30A10Q6XR72 485 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 RCOR2Q8IZ40 523 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 BAP1Q92560 729 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 PCMTD2Q9NV79 361 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 ADA2Q9NZK5 511 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 EIF3DO15371 548 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 FLT3P36888 993 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 IL1RL1Q01638 556 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 SLFN12LQ6IEE8 588 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 ENOSF1Q7L5Y1 443 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 PRPF39Q86UA1 669 aaKnown RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 FAM160B2Q86V87 743 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 LCA5Q86VQ0 697 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 ARHGEF1Q92888 912 aaKnown RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 ELMO3Q96BJ8 720 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 ARHGEF26Q96DR7 871 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 FAM111AQ96PZ2 611 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 MED15Q96RN5 788 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 SH3GL2Q99962 352 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 PAPOLBQ9NRJ5 636 aaKnown RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 FAM53CQ9NYF3 392 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 LOC100653049A0A140TA62 436 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 E2F8A0AVK6 867 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 KRT34O76011 436 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 NDUFB10O96000 172 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 APRTP07741 180 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 PYGMP11217 842 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 EVX2Q03828 476 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 BTKQ06187 659 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 CNGA3Q16281 694 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 TXNRD3Q86VQ6 643 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 ARID3BQ8IVW6 561 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 KIFC3Q9BVG8 833 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 GTF3C4Q9UKN8 822 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 SPATA31D1Q6ZQQ2 1576 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 TBX3O15119 743 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 FOXP2O15409 715 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 MSH4O15457 936 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 SERPINB3P29508 390 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 JAK3P52333 1124 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 GABPAQ06546 454 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 ZNF667Q5HYK9 610 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 MREGQ8N565 214 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 SENP7Q9BQF6 1050 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 USP21Q9UK80 565 aa8.18□□□□□ -1.1
CLCN3-209ENST00000513761 MTO1Q9Y2Z2 717 aaKnown RBP8.18□□□□□ -1.1
CLCN3-209ENST00000513761 CBX6O95503 412 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 DRD4P21917 467 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 EPHB2P29323 1055 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 BCAR1P56945 870 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 ZNF200P98182 395 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 ERMARDQ5T6L9 678 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 FAM160B1Q5W0V3 765 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 PLA2G4FQ68DD2 849 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 TRIM72Q6ZMU5 477 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 ZNF662Q6ZS27 426 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 NCAPG2Q86XI2 1143 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 MCPH1Q8NEM0 835 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 RAB6BQ9NRW1 208 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 DDX56Q9NY93 547 aaKnown RBP8.17□□□□□ -1.1
CLCN3-209ENST00000513761 C1orf167Q5SNV9 1468 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 JCADQ9P266 1359 aa8.17□□□□□ -1.1
CLCN3-209ENST00000513761 NWD1Q149M9 1564 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms