RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 COL20A1Q9P218 1284 aa6.19□□□□□ -1.42
HMGB1P44-201ENST00000508597 FAM184BQ9ULE4 1060 aa6.19□□□□□ -1.42
HMGB1P44-201ENST00000508597 UBIAD1Q9Y5Z9 338 aa6.19□□□□□ -1.42
HMGB1P44-201ENST00000508597 PTCH2Q9Y6C5 1203 aa6.19□□□□□ -1.42
HMGB1P44-201ENST00000508597 ZSWIM8A7E2V4 1837 aa6.19□□□□□ -1.42
HMGB1P44-201ENST00000508597 ASTN1O14525 1302 aa6.19□□□□□ -1.42
HMGB1P44-201ENST00000508597 VPS37CA5D8V6 355 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 MEIS1O00470 390 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 LAD1O00515 517 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 SHOXO15266 292 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 SEPT4O43236 478 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 BAG4O95429 457 aaKnown RBP6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 ZSCAN22P10073 491 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 MYCLP12524 364 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 CYBAP13498 195 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 IRAK1P51617 712 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 NKX3-2P78367 333 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 MRPS9P82933 396 aaKnown RBP6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 GUCY1B3Q02153 619 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 CACNB2Q08289 660 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 NEDD9Q14511 834 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 FXNQ16595 210 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 Q4G0T1 1027 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 BRDTQ58F21 947 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 RALGPS1Q5JS13 557 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 PIK3AP1Q6ZUJ8 805 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 THAP5Q7Z6K1 395 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 TSPYL5Q86VY4 417 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 AGBL5Q8NDL9 886 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 FAM20AQ96MK3 541 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 KATNBL1Q9H079 304 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 SPC25Q9HBM1 224 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 GJB4Q9NTQ9 266 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 TBC1D22BQ9NU19 505 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 TMEM260Q9NX78 707 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 FLRT1Q9NZU1 646 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 EBF1Q9UH73 591 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 PCDHB10Q9UN67 800 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 MTMR6Q9Y217 621 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 MORC2Q9Y6X9 1032 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 NFASCO94856 1347 aa6.18□□□□□ -1.42
HMGB1P44-201ENST00000508597 LRRC37A2A6NM11 1700 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 DUSP11O75319 330 aaKnown RBP6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 CLEC3AO75596 197 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 TP53P04637 393 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 ITGB5P18084 799 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 CYP2C19P33261 490 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 ERVFC1P60507 584 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 MTMR1Q13613 665 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 CCL14Q16627 93 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 INF2Q27J81 1249 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 LETM2Q2VYF4 491 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 DUSP28Q4G0W2 176 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 FYB2Q5VWT5 728 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 TAPT1Q6NXT6 567 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 CCDC62Q6P9F0 684 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 PLA2G4DQ86XP0 818 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 CELF2-AS1Q8N7Q2 184 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 ZNF333Q96JL9 665 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 ZNF396Q96N95 335 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 RIT2Q99578 217 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 WDR11Q9BZH6 1224 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 ADAMTS10Q9H324 1103 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 PIF1Q9H611 641 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 ZSWIM4Q9H7M6 989 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 RC3H2Q9HBD1 1191 aaKnown RBP6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 LMCD1Q9NZU5 365 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 SUCOQ9UBS9 1254 aaKnown RBP6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 DDX25Q9UHL0 483 aaKnown RBP6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 TCEAL9Q9UHQ7 104 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 ZHX1Q9UKY1 873 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 CFAP45Q9UL16 551 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 KCNH3Q9ULD8 1083 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 PCDHA11Q9Y5I1 949 aa6.17□□□□□ -1.42
HMGB1P44-201ENST00000508597 IGLV3-22A0A075B6J6 115 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 KIF28PB7ZC32 967 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 FAM86B1E9PN63 330 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 ZEB2O60315 1214 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 NEMFO60524 1076 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 CCNT1O60563 726 aaKnown RBP6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 KPNA6O60684 536 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 GH1P01241 217 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 GJB1P08034 283 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 FAM86B2P0C5J1 330 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 TXNP10599 105 aaKnown RBP6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 RARBP10826 455 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 DDIT3P35638 169 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 PRPHP41219 470 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 GJA9P57773 515 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 TNFAIP2Q03169 654 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 RESTQ13127 1097 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 BMS1Q14692 1282 aaKnown RBP6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 PPP2R5EQ16537 467 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 PRR16Q569H4 304 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 TTC38Q5R3I4 469 aa6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 AXDND1Q5T1B0 1012 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 ARL6IP4Q66PJ3 421 aaKnown RBP6.16□□□□□ -1.42
HMGB1P44-201ENST00000508597 METTL7BQ6UX53 244 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms