RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 PCDHA13Q9Y5I0 950 aa12.93□□□□□ -0.34
POLR2J3-211ENST00000506060 GRIN2DO15399 1336 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 PTPRJQ12913 1337 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 LRRN2O75325 713 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 VNN1O95497 513 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 ASS1P00966 412 aaKnown RBP12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 PLEKP08567 350 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 CTSHP09668 335 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 KRT5P13647 590 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 ANK1P16157 1881 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 PDE6CP51160 858 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 WNT7BP56706 349 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 C1QTNF8P60827 252 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 RBP5P82980 135 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 PAK2Q13177 524 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 CUL2Q13617 745 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 RALGAPA2Q2PPJ7 1873 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 ASTE1Q2TB18 679 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 ZNF699Q32M78 642 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 SLC10A6Q3KNW5 377 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 PPP1R2P3Q6NXS1 205 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 FAM228AQ86W67 206 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 ZNF677Q86XU0 584 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 SLC43A3Q8NBI5 491 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 TMEM40Q8WWA1 233 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 TATDN2Q93075 761 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 KIF12Q96FN5 646 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 SNX27Q96L92 541 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 DNAI2Q9GZS0 605 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 NIF3L1Q9GZT8 377 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 RNF208Q9H0X6 261 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 UNC93B1Q9H1C4 597 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 FAM124BQ9H5Z6 455 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 ADAMTS1Q9UHI8 967 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 AJAP1Q9UKB5 411 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 INTUQ9ULD6 942 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 ST3GAL5Q9UNP4 418 aa12.92□□□□□ -0.34
POLR2J3-211ENST00000506060 TLR3O15455 904 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 CD4P01730 458 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 CHRNA1P02708 482 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 KRT19P08727 400 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 CCL5P13501 91 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 ATF7P17544 494 aaPredicted RBP12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 CAPN2P17655 700 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 GNG11P61952 73 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 CYP27A1Q02318 531 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 MGAT3Q09327 533 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 MYO1EQ12965 1108 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 NFX1Q12986 1120 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 BFSP2Q13515 415 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 NAB2Q15742 525 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 PKN2Q16513 984 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 IFI16Q16666 785 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 ZNF667Q5HYK9 610 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 ALKBH5Q6P6C2 394 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 ZNF571Q7Z3V5 609 aaPredicted RBP12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 EFCAB13Q8IY85 973 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 TMEM192Q8IY95 271 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 CAGE1Q8TC20 777 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 ZNF592Q92610 1267 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 KREMEN1Q96MU8 473 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 AGPAT1Q99943 283 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 PI4K2AQ9BTU6 479 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 EIF2AQ9BY44 585 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 PAK6Q9NQU5 681 aaPredicted RBP12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 DPP3Q9NY33 737 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 SNTG2Q9NY99 539 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 PARP2Q9UGN5 583 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 UBQLN1Q9UMX0 589 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 PCDHB2Q9Y5E7 798 aa12.91□□□□□ -0.34
POLR2J3-211ENST00000506060 PJA2O43164 708 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 RECQL4O94761 1208 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 STAU1O95793 577 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 NFICP08651 508 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 CASQ1P31415 396 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 MYL6P60660 151 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 GFPT1Q06210 699 aaPredicted RBP12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 FBXO47Q5MNV8 452 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 CTU1Q7Z7A3 348 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 RNF10Q8N5U6 811 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 CALR3Q96L12 384 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 DEFB118Q96PH6 123 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 ALS2CR12Q96Q35 445 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 GPR88Q9GZN0 384 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 VRTNQ9H8Y1 702 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 CYP3A43Q9HB55 503 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 TRMT13Q9NUP7 481 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 SEPT11Q9NVA2 429 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 CNTN3Q9P232 1028 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 NAGPAQ9UK23 515 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 OGDHLQ9ULD0 1010 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 REXO2Q9Y3B8 237 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 PCDHB4Q9Y5E5 795 aa12.9□□□□□ -0.34
POLR2J3-211ENST00000506060 A0A087X0T9 212 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 TACC1O75410 805 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 ITGB3P05106 788 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 H2AFZP0C0S5 128 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 FAM228BP0C875 321 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms