RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ADALQ6DHV7 355 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 ELMSAN1Q6PJG2 1045 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 PRSS55Q6UWB4 352 aaPredicted RBP24.63■■□□□ 1.53
SNIP1-203ENST00000493916 CEP57Q86XR8 500 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 C12orf76Q8N812 135 aaPredicted RBP24.63■■□□□ 1.53
SNIP1-203ENST00000493916 HDAC7Q8WUI4 952 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 KIF12Q96FN5 646 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 IKZF4Q9H2S9 585 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 MAN1C1Q9NR34 630 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 TUBGCP4Q9UGJ1 667 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 AGO2Q9UKV8 859 aaKnown RBP24.63■■□□□ 1.53
SNIP1-203ENST00000493916 PLXNA3P51805 1871 aa24.63■■□□□ 1.53
SNIP1-203ENST00000493916 CYP3A5P20815 502 aa24.62■■□□□ 1.53
SNIP1-203ENST00000493916 CMA1P23946 247 aa24.62■■□□□ 1.53
SNIP1-203ENST00000493916 ADSSP30520 456 aa24.62■■□□□ 1.53
SNIP1-203ENST00000493916 MTHFRP42898 656 aa24.62■■□□□ 1.53
SNIP1-203ENST00000493916 POSTNQ15063 836 aa24.62■■□□□ 1.53
SNIP1-203ENST00000493916 CMASQ8NFW8 434 aaPredicted RBP24.62■■□□□ 1.53
SNIP1-203ENST00000493916 CHAMP1Q96JM3 812 aa24.62■■□□□ 1.53
SNIP1-203ENST00000493916 RIPOR3Q96MK2 946 aa24.62■■□□□ 1.53
SNIP1-203ENST00000493916 SCAND2PQ9GZW5 306 aaPredicted RBP24.62■■□□□ 1.53
SNIP1-203ENST00000493916 UBQLN1Q9UMX0 589 aaKnown RBP24.62■■□□□ 1.53
SNIP1-203ENST00000493916 VWA8A3KMH1 1905 aa24.61■■□□□ 1.53
SNIP1-203ENST00000493916 XPOTO43592 962 aaKnown RBP24.61■■□□□ 1.53
SNIP1-203ENST00000493916 RPL17P18621 184 aaKnown RBP24.61■■□□□ 1.53
SNIP1-203ENST00000493916 LRPAP1P30533 357 aa24.61■■□□□ 1.53
SNIP1-203ENST00000493916 BRCC3P46736 316 aa24.61■■□□□ 1.53
SNIP1-203ENST00000493916 LILRA6Q6PI73 481 aa24.61■■□□□ 1.53
SNIP1-203ENST00000493916 STXBP4Q6ZWJ1 553 aa24.61■■□□□ 1.53
SNIP1-203ENST00000493916 POMGNT1Q8WZA1 660 aa24.61■■□□□ 1.53
SNIP1-203ENST00000493916 KHSRPQ92945 711 aaKnown RBP eCLIP24.61■■□□□ 1.531e-7■□□□□ 10
SNIP1-203ENST00000493916 CLSTN3Q9BQT9 956 aa24.61■■□□□ 1.53
SNIP1-203ENST00000493916 PLEKHA4Q9H4M7 779 aa24.61■■□□□ 1.53
SNIP1-203ENST00000493916 TMEM206Q9H813 350 aa24.61■■□□□ 1.53
SNIP1-203ENST00000493916 DERAQ9Y315 318 aa24.61■■□□□ 1.53
SNIP1-203ENST00000493916 TGM5O43548 720 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 PAPLNO95428 1278 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 SLFN14P0C7P3 912 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 ACOT2P49753 483 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 SPAG1Q07617 926 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 C15orf39Q6ZRI6 1047 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 UNC13DQ70J99 1090 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 CEP57L1Q8IYX8 460 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 RHOBTB2Q9BYZ6 727 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 ASB7Q9H672 318 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 MTRRQ9UBK8 725 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 CDH22Q9UJ99 828 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 HPSEQ9Y251 543 aa24.6■■□□□ 1.53
SNIP1-203ENST00000493916 SPDYE4A6NLX3 237 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 PI4K2BG5E9Z4 385 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 I3L4J1 428 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 SYN3O14994 580 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 EIF3DO15371 548 aaKnown RBP eCLIP24.59■■□□□ 1.53
SNIP1-203ENST00000493916 ACTN4O43707 911 aaKnown RBP24.59■■□□□ 1.53
SNIP1-203ENST00000493916 PFKFB1P16118 471 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 GARTP22102 1010 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 TKTP29401 623 aaKnown RBP24.59■■□□□ 1.53
SNIP1-203ENST00000493916 EHHADHQ08426 723 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 ATAT1Q5SQI0 421 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 KANK3Q6NY19 840 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 TMC5Q6UXY8 1006 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 ANKS3Q6ZW76 656 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 GPR149Q86SP6 731 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 PALB2Q86YC2 1186 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 SYCP3Q8IZU3 236 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 POMKQ9H5K3 350 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 USP25Q9UHP3 1055 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 NUB1Q9Y5A7 615 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 BACE2Q9Y5Z0 518 aa24.59■■□□□ 1.53
SNIP1-203ENST00000493916 FAM237AA0A1B0GTK4 181 aa24.58■■□□□ 1.53
SNIP1-203ENST00000493916 PRPF6O94906 941 aaKnown RBP24.58■■□□□ 1.53
SNIP1-203ENST00000493916 FAM26FQ5R3K3 315 aa24.58■■□□□ 1.53
SNIP1-203ENST00000493916 SPATA1Q5VX52 437 aa24.58■■□□□ 1.53
SNIP1-203ENST00000493916 JADE1Q6IE81 842 aa24.58■■□□□ 1.53
SNIP1-203ENST00000493916 CRELD2Q6UXH1 353 aaPredicted RBP24.58■■□□□ 1.53
SNIP1-203ENST00000493916 CYP26C1Q6V0L0 522 aa24.58■■□□□ 1.53
SNIP1-203ENST00000493916 GLYCTKQ8IVS8 523 aa24.58■■□□□ 1.53
SNIP1-203ENST00000493916 HPS3Q969F9 1004 aa24.58■■□□□ 1.53
SNIP1-203ENST00000493916 SUSD3Q96L08 255 aa24.58■■□□□ 1.53
SNIP1-203ENST00000493916 C2CD2Q9Y426 696 aa24.58■■□□□ 1.53
SNIP1-203ENST00000493916 PVALEFA0A1B0GWK0 134 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 NFICP08651 508 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 WEE2P0C1S8 567 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 NUCB2P80303 420 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 TMEM132DQ14C87 1099 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 EPM2AIP1Q7L775 607 aaPredicted RBP24.57■■□□□ 1.52
SNIP1-203ENST00000493916 GLIS3Q8NEA6 775 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 BEST2Q8NFU1 509 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 FAM212AQ96EL1 285 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 RPGRIP1Q96KN7 1286 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 ZDHHC7Q9NXF8 308 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 SERTAD1Q9UHV2 236 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 FBXW11Q9UKB1 542 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 NR2E1Q9Y466 385 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 UBE4BO95155 1302 aa24.57■■□□□ 1.52
SNIP1-203ENST00000493916 DENND4AQ7Z401 1863 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 A0A1B0GVL5 298 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 A0A1W2PQ27 194 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 A0A1W2PQ64 194 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 A0A1W2PQD8 194 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms