RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ZBTB6Q15916 424 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 ATAT1Q5SQI0 421 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 SLC39A4Q6P5W5 647 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 SYCE2Q6PIF2 218 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-207ENST00000493648 UNC13DQ70J99 1090 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 PALB2Q86YC2 1186 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 ADHFE1Q8IWW8 467 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 GJD3Q8N144 294 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 SMRP1Q8NCR6 262 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 BEST2Q8NFU1 509 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 LNX1Q8TBB1 728 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-207ENST00000493648 HDAC7Q8WUI4 952 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 PIK3R5Q8WYR1 880 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 C18orf25Q96B23 403 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-207ENST00000493648 PAGE5Q96GU1 130 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 CCDC34Q96HJ3 373 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 B3GALT6Q96L58 329 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 FBXL18Q96ME1 805 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 NECAB3Q96P71 396 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-207ENST00000493648 APOL5Q9BWW9 433 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 S1PR5Q9H228 398 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 BLZF1Q9H2G9 400 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 ADAM7Q9H2U9 754 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 ASB7Q9H672 318 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 GOLGA2P5Q9HBQ8 144 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 UBQLN1Q9UMX0 589 aaKnown RBP7.59□□□□□ -1.19
TOP3A-207ENST00000493648 HPSEQ9Y251 543 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 DERAQ9Y315 318 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 USP15Q9Y4E8 981 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-207ENST00000493648 NUB1Q9Y5A7 615 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 PRUNE2Q8WUY3 3088 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 H7C4K7 107 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 KIAA0391O15091 583 aaKnown RBP7.58□□□□□ -1.2
TOP3A-207ENST00000493648 EIF3DO15371 548 aaKnown RBP eCLIP7.58□□□□□ -1.2
TOP3A-207ENST00000493648 MEFVO15553 781 aaPredicted RBP7.58□□□□□ -1.2
TOP3A-207ENST00000493648 FAM189A1O60320 539 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 IL18RAPO95256 599 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 GLUD1P00367 558 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 MYL1P05976 194 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 PFKFB1P16118 471 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 FGFR3P22607 806 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 PAX3P23760 479 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 ADSSP30520 456 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 LRPAP1P30533 357 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 MCM4P33991 863 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 MTHFRP42898 656 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 SYKP43405 635 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 BRCC3P46736 316 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 CASP5P51878 434 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 PSMD2Q13200 908 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 CUL4BQ13620 913 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 CBX2Q14781 532 aaPredicted RBP7.58□□□□□ -1.2
TOP3A-207ENST00000493648 ENOX2Q16206 610 aaKnown RBP7.58□□□□□ -1.2
TOP3A-207ENST00000493648 PSMD5Q16401 504 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 FAM26FQ5R3K3 315 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 ZBTB41Q5SVQ8 909 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 RARS2Q5T160 578 aaKnown RBP7.58□□□□□ -1.2
TOP3A-207ENST00000493648 KANK3Q6NY19 840 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 PRSS55Q6UWB4 352 aaPredicted RBP7.58□□□□□ -1.2
TOP3A-207ENST00000493648 ANKS3Q6ZW76 656 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 FSIP1Q8NA03 581 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 APPL2Q8NEU8 664 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 ZNF507Q8TCN5 953 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 HPS3Q969F9 1004 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 CCDC47Q96A33 483 aaKnown RBP7.58□□□□□ -1.2
TOP3A-207ENST00000493648 CHAMP1Q96JM3 812 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 RIPOR3Q96MK2 946 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 NECTIN4Q96NY8 510 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 CLSTN3Q9BQT9 956 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 FAM213AQ9BRX8 229 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 PHF7Q9BWX1 381 aaPredicted RBP7.58□□□□□ -1.2
TOP3A-207ENST00000493648 PLEKHA4Q9H4M7 779 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 EYSQ5T1H1 3165 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 REV3LO60673 3130 aa7.58□□□□□ -1.2
TOP3A-207ENST00000493648 MTCL1Q9Y4B5 1905 aaKnown RBP7.57□□□□□ -1.2
TOP3A-207ENST00000493648 FAM237AA0A1B0GTK4 181 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 TISP43B9A030 160 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 SYN3O14994 580 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 TGM5O43548 720 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 ACTN4O43707 911 aaKnown RBP7.57□□□□□ -1.2
TOP3A-207ENST00000493648 EXTL3O43909 919 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 ZNF202O95125 648 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 SPATA31D3P0C874 917 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 RPL17P18621 184 aaKnown RBP7.57□□□□□ -1.2
TOP3A-207ENST00000493648 TKTP29401 623 aaKnown RBP7.57□□□□□ -1.2
TOP3A-207ENST00000493648 CASP1P29466 404 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 OR1D2P34982 312 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 NDUFA8P51970 172 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 SNRPFP62306 86 aaKnown RBP7.57□□□□□ -1.2
TOP3A-207ENST00000493648 ZP2Q05996 745 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 TMEM132DQ14C87 1099 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 SURF1Q15526 300 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 RTP2Q5QGT7 225 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 SPATA1Q5VX52 437 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 JADE1Q6IE81 842 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 ARMCX5Q6P1M9 558 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 LILRA6Q6PI73 481 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 CD300LGQ6UXG3 332 aa7.57□□□□□ -1.2
TOP3A-207ENST00000493648 CYP26C1Q6V0L0 522 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms