RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 VPS13AQ96RL7 3174 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 H7C4K7 107 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 ARPP19P56211 112 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 ATP2C1P98194 919 aaPredicted RBP16.75■□□□□ 0.27
TRIM50-203ENST00000488217 RAD51AP2Q09MP3 1159 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 SLC10A6Q3KNW5 377 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 TMEM161BQ8NDZ6 487 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 C18orf25Q96B23 403 aaPredicted RBP16.75■□□□□ 0.27
TRIM50-203ENST00000488217 SNX27Q96L92 541 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 PLIN2Q99541 437 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 SEMA4AQ9H3S1 761 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 AVENQ9NQS1 362 aaPredicted RBP16.75■□□□□ 0.27
TRIM50-203ENST00000488217 GDE1Q9NZC3 331 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 DLGAP2Q9P1A6 1054 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 CNTN3Q9P232 1028 aa16.75■□□□□ 0.27
TRIM50-203ENST00000488217 ARHGEF37A1IGU5 675 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 VWA3AA6NCI4 1184 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 H3BQV1 296 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 PRRG1O14668 218 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 CLDN3O15551 220 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 MEFVO15553 781 aaPredicted RBP16.74■□□□□ 0.27
TRIM50-203ENST00000488217 PLA2G4BP0C869 781 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 MAPTP10636 758 aaKnown RBP16.74■□□□□ 0.27
TRIM50-203ENST00000488217 HARSP12081 509 aaKnown RBP16.74■□□□□ 0.27
TRIM50-203ENST00000488217 ATF2P15336 505 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 SLC12A3P55017 1021 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 ROR1Q01973 937 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 SEZ6Q53EL9 994 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 ARL6IP4Q66PJ3 421 aaKnown RBP16.74■□□□□ 0.27
TRIM50-203ENST00000488217 ZPBP2Q6X784 338 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 C1orf210Q8IVY1 113 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 NPAS3Q8IXF0 933 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 TCEAL8Q8IYN2 117 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 ADSSL1Q8N142 457 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 MCRS1Q96EZ8 462 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 KCND2Q9NZV8 630 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 ARID2Q68CP9 1835 aa16.74■□□□□ 0.27
TRIM50-203ENST00000488217 KANSL1LA0AUZ9 987 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 LRG1P02750 347 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 RHOP08100 348 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 MARCKSP29966 332 aaPredicted RBP16.73■□□□□ 0.27
TRIM50-203ENST00000488217 PFKPQ01813 784 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 PRKCQQ04759 706 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 ARSHQ5FYA8 562 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 TPGS2Q68CL5 300 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 APPL2Q8NEU8 664 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 CDK5RAP3Q96JB5 506 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 SUSD3Q96L08 255 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 KXD1Q9BQD3 176 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 FOXQ1Q9C009 403 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 PLEKHA5Q9HAU0 1116 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 CYP4F11Q9HBI6 524 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 FBXL5Q9UKA1 691 aa16.73■□□□□ 0.27
TRIM50-203ENST00000488217 PTPRZ1P23471 2315 aaPredicted RBP16.72■□□□□ 0.27
TRIM50-203ENST00000488217 NPHP3-ACAD11A0A0J9YXS1 232 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 WDR27A2RRH5 827 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 ECI2O75521 394 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 SEC24AO95486 1093 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 CLTAP09496 248 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 GLULP15104 373 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 GJB2P29033 226 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 MCL1Q07820 350 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 CTXN3Q4LDR2 81 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 POTEHQ6S545 545 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 PJA1Q8NG27 643 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 ING5Q8WYH8 240 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 TBC1D32Q96NH3 1257 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 DDX23Q9BUQ8 820 aaKnown RBP16.72■□□□□ 0.27
TRIM50-203ENST00000488217 LARSQ9P2J5 1176 aaKnown RBP16.72■□□□□ 0.27
TRIM50-203ENST00000488217 ANKFY1Q9P2R3 1169 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 MAFFQ9ULX9 164 aa16.72■□□□□ 0.27
TRIM50-203ENST00000488217 FAM170BA6NMN3 283 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 H0YCG3 227 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 ZNF197O14709 1029 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 SLC26A4O43511 780 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 MICAL2O94851 1124 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 MATR3P43243 847 aaKnown RBP eCLIP16.71■□□□□ 0.27
TRIM50-203ENST00000488217 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.27
TRIM50-203ENST00000488217 MLF2Q15773 248 aaPredicted RBP16.71■□□□□ 0.27
TRIM50-203ENST00000488217 ZBTB6Q15916 424 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 SLC5A9Q2M3M2 681 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 TANGO2Q6ICL3 276 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 HAUS6Q7Z4H7 955 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 DDX12PQ92771 950 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 AK8Q96MA6 479 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 ZNF512Q96ME7 567 aaPredicted RBP16.71■□□□□ 0.27
TRIM50-203ENST00000488217 NELL2Q99435 816 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 CORO1BQ9BR76 489 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 OSBPL6Q9BZF3 934 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 PLA2G2FQ9BZM2 168 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 HAPLN2Q9GZV7 340 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 DENND4AQ7Z401 1863 aa16.71■□□□□ 0.27
TRIM50-203ENST00000488217 PLXNA3P51805 1871 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 LRRN2O75325 713 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 LMNAP02545 664 aaKnown RBP16.7■□□□□ 0.26
TRIM50-203ENST00000488217 SP9P0CG40 484 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 MCM4P33991 863 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 UBA7P41226 1012 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms