RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 MTMR12Q9C0I1 747 aa21.96■■□□□ 1.11
CDHR3-210ENST00000474330 AIPL1Q9NZN9 384 aa21.96■■□□□ 1.11
CDHR3-210ENST00000474330 PITPNM1O00562 1244 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 PHACTR2O75167 634 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 TMEM191BP0C7N4 346 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 CD52P31358 61 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 PIK3CAP42336 1068 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 YARSP54577 528 aaKnown RBP21.95■■□□□ 1.1
CDHR3-210ENST00000474330 TFAMQ00059 246 aaKnown RBP21.95■■□□□ 1.1
CDHR3-210ENST00000474330 SFMBT2Q5VUG0 894 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 NT5C1BQ96P26 610 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 CHP1Q99653 195 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 NXF3Q9H4D5 531 aaKnown RBP21.95■■□□□ 1.1
CDHR3-210ENST00000474330 C2CD2Q9Y426 696 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 HES2Q9Y543 173 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 TNNC2P02585 160 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 NFICP08651 508 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 PAK2Q13177 524 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 RAPGEF1Q13905 1077 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 JADE1Q6IE81 842 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 LRRC8DQ7L1W4 858 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 ARHGEF19Q8IW93 802 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 UBE2TQ9NPD8 197 aaPredicted RBP21.95■■□□□ 1.1
CDHR3-210ENST00000474330 IPPQ9Y573 584 aa21.95■■□□□ 1.1
CDHR3-210ENST00000474330 SOWAHDA6NJG2 315 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 SELPP16109 830 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 ZSCAN20P17040 1043 aaPredicted RBP21.94■■□□□ 1.1
CDHR3-210ENST00000474330 NCOA4Q13772 614 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 DRAP1Q14919 205 aaPredicted RBP21.94■■□□□ 1.1
CDHR3-210ENST00000474330 SHHQ15465 462 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 WDR44Q5JSH3 913 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 C9orf50Q5SZB4 431 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 MFSD5Q6N075 450 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 ALKAL1Q6UXT8 129 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 SMG8Q8ND04 991 aaKnown RBP21.94■■□□□ 1.1
CDHR3-210ENST00000474330 HELQQ8TDG4 1101 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 SNX27Q96L92 541 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 FAM81BQ96LP2 452 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 TRAIPQ9BWF2 469 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 DERAQ9Y315 318 aa21.94■■□□□ 1.1
CDHR3-210ENST00000474330 UMODL1Q5DID0 1318 aa21.93■■□□□ 1.1
CDHR3-210ENST00000474330 RECQL4O94761 1208 aa21.93■■□□□ 1.1
CDHR3-210ENST00000474330 CST3P01034 146 aaPredicted RBP21.93■■□□□ 1.1
CDHR3-210ENST00000474330 STAT1P42224 750 aa21.93■■□□□ 1.1
CDHR3-210ENST00000474330 LRIT3Q3SXY7 679 aa21.93■■□□□ 1.1
CDHR3-210ENST00000474330 RAD9BQ6WBX8 426 aa21.93■■□□□ 1.1
CDHR3-210ENST00000474330 PI4K2AQ9BTU6 479 aa21.93■■□□□ 1.1
CDHR3-210ENST00000474330 GPR88Q9GZN0 384 aa21.93■■□□□ 1.1
CDHR3-210ENST00000474330 HIPK3Q9H422 1215 aa21.93■■□□□ 1.1
CDHR3-210ENST00000474330 FAM105AQ9NUU6 356 aa21.93■■□□□ 1.1
CDHR3-210ENST00000474330 PDCD11Q14690 1871 aaKnown RBP21.93■■□□□ 1.1
CDHR3-210ENST00000474330 SCN5AQ14524 2016 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 F8VZ95 297 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 CYP2C18P33260 490 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 MFAP3P55082 362 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 DSC3Q14574 896 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 MBTPS1Q14703 1052 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 TMEM132DQ14C87 1099 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 XKR4Q5GH76 650 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 C16orf59Q7L2K0 433 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 FMNL3Q8IVF7 1028 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 PPM1KQ8N3J5 372 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 TATDN2Q93075 761 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 LRCH3Q96II8 777 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 TSPAN18Q96SJ8 248 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 PPP1R12CQ9BZL4 782 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 CNTN3Q9P232 1028 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 ARHGAP20Q9P2F6 1191 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 PCDHB2Q9Y5E7 798 aa21.92■■□□□ 1.1
CDHR3-210ENST00000474330 SLC34A2O95436 690 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 SERPING1P05155 500 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 AKAP5P24588 427 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 SOX5P35711 763 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 GCNT1Q02742 428 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 MTF1Q14872 753 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 ASIC2Q16515 512 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 ARHGAP44Q17R89 818 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 SGSM1Q2NKQ1 1148 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 HGSNATQ68CP4 663 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 ENOSF1Q7L5Y1 443 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 IRF2BP2Q7Z5L9 587 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 RNF39Q9H2S5 420 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 KCND1Q9NSA2 647 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 C1orf112Q9NSG2 853 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 RBAK-RBAKDNI3L0D1 243 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 ASS1P00966 412 aaKnown RBP21.91■■□□□ 1.1
CDHR3-210ENST00000474330 FPGSQ05932 587 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 TRPC3Q13507 836 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 ZBTB6Q15916 424 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 CCDC170Q8IYT3 715 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 C1orf127Q8N9H9 656 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 KIF12Q96FN5 646 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 KREMEN1Q96MU8 473 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 APOL6Q9BWW8 343 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 IMPG2Q9BZV3 1241 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 NHEJ1Q9H9Q4 299 aaPredicted RBP21.91■■□□□ 1.1
CDHR3-210ENST00000474330 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.91■■□□□ 1.1
CDHR3-210ENST00000474330 PARP2Q9UGN5 583 aa21.91■■□□□ 1.1
CDHR3-210ENST00000474330 SSU72P8A0A1W2PR75 194 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 MGEA5O60502 916 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms