RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ELANEP08246 267 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 EGR2P11161 476 aaPredicted RBP7.4□□□□□ -1.22
CCDC39-202ENST00000471307 CKBP12277 381 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 ADRA1BP35368 520 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 CDKN1CP49918 316 aaPredicted RBP7.4□□□□□ -1.22
CCDC39-202ENST00000471307 CDC42EP1Q00587 391 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 CREMQ03060 361 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 TP53BP2Q13625 1128 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 ZGPATQ8N5A5 531 aaKnown RBP7.4□□□□□ -1.22
CCDC39-202ENST00000471307 FITM2Q8N6M3 262 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 PPM1NQ8N819 430 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 PRPF38AQ8NAV1 312 aaKnown RBP7.4□□□□□ -1.22
CCDC39-202ENST00000471307 BEND2Q8NDZ0 799 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 NUP133Q8WUM0 1156 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 DPF2Q92785 391 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 C11orf54Q9H0W9 315 aaPredicted RBP7.4□□□□□ -1.22
CCDC39-202ENST00000471307 TUBD1Q9UJT1 453 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 MT-CO1P00395 513 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 MYBL2P10244 700 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 C5AR1P21730 350 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 ACAP2Q15057 778 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 B3GNTL1Q67FW5 361 aaPredicted RBP7.39□□□□□ -1.23
CCDC39-202ENST00000471307 FOXR2Q6PJQ5 311 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 UBE3BQ7Z3V4 1068 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 SLC9A6Q92581 669 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 MYOCQ99972 504 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 ALOXE3Q9BYJ1 711 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 SLC13A1Q9BZW2 595 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 TDP1Q9NUW8 608 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 MAP3K2Q9Y2U5 619 aa7.39□□□□□ -1.23
CCDC39-202ENST00000471307 UNC119BA6NIH7 251 aa7.38□□□□□ -1.23
CCDC39-202ENST00000471307 GABRDO14764 452 aa7.38□□□□□ -1.23
CCDC39-202ENST00000471307 GPANK1O95872 356 aa7.38□□□□□ -1.23
CCDC39-202ENST00000471307 FGFR4P22455 802 aa7.38□□□□□ -1.23
CCDC39-202ENST00000471307 ABCB5Q2M3G0 1257 aa7.38□□□□□ -1.23
CCDC39-202ENST00000471307 PPP4R3AQ6IN85 833 aa7.38□□□□□ -1.23
CCDC39-202ENST00000471307 CMTR2Q8IYT2 770 aaKnown RBP7.38□□□□□ -1.23
CCDC39-202ENST00000471307 MED15Q96RN5 788 aa7.38□□□□□ -1.23
CCDC39-202ENST00000471307 PNKPQ96T60 521 aa7.38□□□□□ -1.23
CCDC39-202ENST00000471307 GALNT9Q9HCQ5 603 aa7.38□□□□□ -1.23
CCDC39-202ENST00000471307 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.38□□□□□ -1.23
CCDC39-202ENST00000471307 RUVBL1Q9Y265 456 aaKnown RBP7.38□□□□□ -1.23
CCDC39-202ENST00000471307 HMGXB3Q12766 1538 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 BAZ1BQ9UIG0 1483 aaKnown RBP7.37□□□□□ -1.23
CCDC39-202ENST00000471307 MYADML2A6NDP7 307 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 FZD9O00144 591 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 XPOTO43592 962 aaKnown RBP7.37□□□□□ -1.23
CCDC39-202ENST00000471307 PPFIA2O75334 1257 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 HAUS5O94927 633 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 RPLP2P05387 115 aaKnown RBP7.37□□□□□ -1.23
CCDC39-202ENST00000471307 SLC6A2P23975 617 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 NANOS3P60323 173 aaKnown RBP7.37□□□□□ -1.23
CCDC39-202ENST00000471307 CXADRP78310 365 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 RSPH3Q86UC2 560 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 DNAJC10Q8IXB1 793 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 ASB10Q8WXI3 467 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 MTMR8Q96EF0 704 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 SPEF1Q9Y4P9 236 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 IPPQ9Y573 584 aa7.37□□□□□ -1.23
CCDC39-202ENST00000471307 EPN1Q9Y6I3 576 aaPredicted RBP7.37□□□□□ -1.23
CCDC39-202ENST00000471307 TOP2AP11388 1531 aaKnown RBP7.37□□□□□ -1.23
CCDC39-202ENST00000471307 PCDHGA12O60330 932 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 MTHFD1P11586 935 aaKnown RBP7.36□□□□□ -1.23
CCDC39-202ENST00000471307 FDXRP22570 491 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 SEC24CP53992 1094 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 TARDBPQ13148 414 aaKnown RBP eCLIP7.36□□□□□ -1.23
CCDC39-202ENST00000471307 RAB39AQ14964 217 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 ZCRB1Q8TBF4 217 aaKnown RBP7.36□□□□□ -1.23
CCDC39-202ENST00000471307 CAVIN3Q969G5 261 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 TEKT5Q96M29 485 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 ZSWIM1Q9BR11 485 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 GSTO2Q9H4Y5 243 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 PCDHGA9Q9Y5G4 932 aaKnown RBP7.36□□□□□ -1.23
CCDC39-202ENST00000471307 PCDHGA8Q9Y5G5 932 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 PCDHGA7Q9Y5G6 932 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 PCDHGA6Q9Y5G7 932 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 PCDHGA3Q9Y5H0 932 aa7.36□□□□□ -1.23
CCDC39-202ENST00000471307 MAST3O60307 1309 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 TCRBV7S2A1N4TA0A589 114 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 HTRA2O43464 458 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-202ENST00000471307 KATNA1O75449 491 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 PRSS23O95084 383 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 ESRRBO95718 433 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 ITGAMP11215 1152 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 BMP5P22003 454 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 ADKP55263 362 aaKnown RBP7.35□□□□□ -1.23
CCDC39-202ENST00000471307 HSD11B2P80365 405 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 SCAPQ12770 1279 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 PABPC1LQ4VXU2 614 aaKnown RBP7.35□□□□□ -1.23
CCDC39-202ENST00000471307 GPR150Q8NGU9 434 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 IFI44Q8TCB0 444 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 RNF31Q96EP0 1072 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 TMX3Q96JJ7 454 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 CRAMP1Q96RY5 1269 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 CALCOCO1Q9P1Z2 691 aa7.35□□□□□ -1.23
CCDC39-202ENST00000471307 CDHR4A6H8M9 788 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 KIAA0391O15091 583 aaKnown RBP7.34□□□□□ -1.23
CCDC39-202ENST00000471307 MPP3Q13368 585 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 ERCC6LQ2NKX8 1250 aa7.34□□□□□ -1.23
CCDC39-202ENST00000471307 EFCAB2Q5VUJ9 269 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms