RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 FAM13BQ9NYF5 915 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 TBC1D7Q9P0N9 293 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 CDH22Q9UJ99 828 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 KCNH3Q9ULD8 1083 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 PCDHB13Q9Y5F0 798 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 NOTCH4Q99466 2003 aa16.52■□□□□ 0.23
ATG4B-215ENST00000468018 LACTBL1A8MY62 500 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 ACTN4O43707 911 aaKnown RBP16.51■□□□□ 0.23
ATG4B-215ENST00000468018 GCNT3O95395 438 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 GLUD1P00367 558 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 CMA1P23946 247 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 MATR3P43243 847 aaKnown RBP eCLIP16.51■□□□□ 0.235e-10■■□□□ 12.9
ATG4B-215ENST00000468018 PPP2R3AQ06190 1150 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 EPM2AIP1Q7L775 607 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-215ENST00000468018 CD302Q8IX05 232 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 CMASQ8NFW8 434 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-215ENST00000468018 HDAC7Q8WUI4 952 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 ACCSQ96QU6 501 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 CLSTN3Q9BQT9 956 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 PYM1Q9BRP8 204 aaKnown RBP16.51■□□□□ 0.23
ATG4B-215ENST00000468018 SFXN1Q9H9B4 322 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 RPF1Q9H9Y2 349 aaKnown RBP16.51■□□□□ 0.23
ATG4B-215ENST00000468018 TUBGCP4Q9UGJ1 667 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 UBQLN1Q9UMX0 589 aaKnown RBP16.51■□□□□ 0.23
ATG4B-215ENST00000468018 EXOC7Q9UPT5 735 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 ATP6V1DQ9Y5K8 247 aa16.51■□□□□ 0.23
ATG4B-215ENST00000468018 PI4K2BG5E9Z4 385 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 TGM5O43548 720 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 RPL17P18621 184 aaKnown RBP16.5■□□□□ 0.23
ATG4B-215ENST00000468018 BRCC3P46736 316 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 AARSP49588 968 aaKnown RBP eCLIP16.5■□□□□ 0.23
ATG4B-215ENST00000468018 PSMD5Q16401 504 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 PDXDC1Q6P996 788 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 C15orf39Q6ZRI6 1047 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 UNC13DQ70J99 1090 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 GPR149Q86SP6 731 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 TMEM130Q8N3G9 435 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 C12orf76Q8N812 135 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-215ENST00000468018 GLIS3Q8NEA6 775 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 SPATA32Q96LK8 384 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 NECTIN4Q96NY8 510 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 APOL5Q9BWW9 433 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 ASB7Q9H672 318 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 MAN1C1Q9NR34 630 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 MTRRQ9UBK8 725 aa16.5■□□□□ 0.23
ATG4B-215ENST00000468018 AGO2Q9UKV8 859 aaKnown RBP16.5■□□□□ 0.23
ATG4B-215ENST00000468018 SYN3O14994 580 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 EIF3DO15371 548 aaKnown RBP eCLIP16.49■□□□□ 0.23
ATG4B-215ENST00000468018 TRAPPC3O43617 180 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 TBC1D4O60343 1298 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 PRPF6O94906 941 aaKnown RBP16.49■□□□□ 0.23
ATG4B-215ENST00000468018 SLFN14P0C7P3 912 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 PFKFB1P16118 471 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 GARTP22102 1010 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 TKTP29401 623 aaKnown RBP16.49■□□□□ 0.23
ATG4B-215ENST00000468018 HOXD13P35453 343 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 ACOT2P49753 483 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 ASIC1P78348 528 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 SPAG1Q07617 926 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 MRPL58Q14197 206 aaKnown RBP16.49■□□□□ 0.23
ATG4B-215ENST00000468018 POSTNQ15063 836 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 RARS2Q5T160 578 aaKnown RBP16.49■□□□□ 0.23
ATG4B-215ENST00000468018 SPATA1Q5VX52 437 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 CES5AQ6NT32 575 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 KANK3Q6NY19 840 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 HPS3Q969F9 1004 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 KIF12Q96FN5 646 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 SCAND2PQ9GZW5 306 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-215ENST00000468018 PLEKHA4Q9H4M7 779 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 POMKQ9H5K3 350 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 TMEM206Q9H813 350 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 DPP7Q9UHL4 492 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 FBXW11Q9UKB1 542 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 DERAQ9Y315 318 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 C2CD2Q9Y426 696 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 BACE2Q9Y5Z0 518 aa16.49■□□□□ 0.23
ATG4B-215ENST00000468018 TECTAO75443 2155 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 PVALEFA0A1B0GWK0 134 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 A0A1W2PQ27 194 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 A0A1W2PQ64 194 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 A0A1W2PQD8 194 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 I3L4J1 428 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 ADAM12O43184 909 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 KLRC4O43908 158 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 CASP1P29466 404 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 SSTR3P32745 418 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-215ENST00000468018 MTHFRP42898 656 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 CUL4BQ13620 913 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 RAB33AQ14088 237 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 JADE1Q6IE81 842 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 RSPO2Q6UXX9 243 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-215ENST00000468018 CEP57Q86XR8 500 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 ZSWIM2Q8NEG5 633 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 ZNF507Q8TCN5 953 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 POMGNT1Q8WZA1 660 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 SUSD3Q96L08 255 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 EPHX3Q9H6B9 360 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
ATG4B-215ENST00000468018 A0A1B0GVL5 298 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms