RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 MPLP40238 635 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 MLH1P40692 756 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 CYP4A11Q02928 519 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 SPIRE1Q08AE8 756 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 PTGDRQ13258 359 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 RTP2Q5QGT7 225 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 C19orf48Q6RUI8 117 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 PDZD3Q86UT5 571 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 KBTBD6Q86V97 674 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 WDR5BQ86VZ2 330 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 TPH2Q8IWU9 490 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 GPR65Q8IYL9 337 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 SLFN12Q8IYM2 578 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 SMG8Q8ND04 991 aaKnown RBP10.79□□□□□ -0.68
USP39-212ENST00000465514 EIF2AQ9BY44 585 aaKnown RBP10.79□□□□□ -0.68
USP39-212ENST00000465514 RBM12Q9NTZ6 932 aaKnown RBP10.79□□□□□ -0.68
USP39-212ENST00000465514 GDE1Q9NZC3 331 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 ORC3Q9UBD5 711 aaPredicted RBP10.79□□□□□ -0.68
USP39-212ENST00000465514 MRPS23Q9Y3D9 190 aaKnown RBP10.79□□□□□ -0.68
USP39-212ENST00000465514 ACACAQ13085 2346 aa10.79□□□□□ -0.68
USP39-212ENST00000465514 C4orf47A7E2U8 309 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 NRG2O14511 850 aaPredicted RBP10.78□□□□□ -0.68
USP39-212ENST00000465514 TSPAN1O60635 241 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 NR1I2O75469 434 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 RPP40O75818 363 aaKnown RBP10.78□□□□□ -0.68
USP39-212ENST00000465514 ERLIN2O94905 339 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 POU2F2P09086 479 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 CCNE1P24864 410 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 SCNN1GP51170 649 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 PTENP60484 403 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 NR5A1Q13285 461 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 MXD4Q14582 209 aaPredicted RBP10.78□□□□□ -0.68
USP39-212ENST00000465514 AXDND1Q5T1B0 1012 aaPredicted RBP10.78□□□□□ -0.68
USP39-212ENST00000465514 CACNA2D4Q7Z3S7 1137 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 CNNM3Q8NE01 707 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 GAB3Q8WWW8 586 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 WASF1Q92558 559 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 RABGGTAQ92696 567 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 CPB2Q96IY4 423 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 ZFP42Q96MM3 310 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 GAD1Q99259 594 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 MTRQ99707 1265 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 EIF2AK1Q9BQI3 630 aaKnown RBP10.78□□□□□ -0.68
USP39-212ENST00000465514 CLSTN3Q9BQT9 956 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 TRMT61BQ9BVS5 477 aaKnown RBP10.78□□□□□ -0.68
USP39-212ENST00000465514 COLEC11Q9BWP8 271 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 ZNF334Q9HCZ1 680 aaPredicted RBP10.78□□□□□ -0.68
USP39-212ENST00000465514 UBN1Q9NPG3 1134 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 XPNPEP1Q9NQW7 623 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 VPS45Q9NRW7 570 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 ADAM28Q9UKQ2 775 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 GPSM3Q9Y4H4 160 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 HES2Q9Y543 173 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 IPPQ9Y573 584 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 PCNX2A6NKB5 2137 aa10.78□□□□□ -0.68
USP39-212ENST00000465514 INO80B-WBP1J3KQ70 363 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 ADAM12O43184 909 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 HYAL3O43820 417 aaPredicted RBP10.77□□□□□ -0.69
USP39-212ENST00000465514 RHOP08100 348 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 FDPSP14324 419 aaKnown RBP10.77□□□□□ -0.69
USP39-212ENST00000465514 AXLP30530 894 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 GDI1P31150 447 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 KRT2P35908 639 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 NCBP1Q09161 790 aaKnown RBP10.77□□□□□ -0.69
USP39-212ENST00000465514 TFDP1Q14186 410 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 LRRC32Q14392 662 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 PCBP1Q15365 356 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP39-212ENST00000465514 PSMD5Q16401 504 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 WDR44Q5JSH3 913 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 DAB2IPQ5VWQ8 1189 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 NOTUMQ6P988 496 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 MAP4K3Q8IVH8 894 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 NECAB1Q8N987 351 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 IRF7Q92985 503 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 TNFRSF25Q93038 417 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 BBC3Q96PG8 261 aaPredicted RBP10.77□□□□□ -0.69
USP39-212ENST00000465514 HSD17B14Q9BPX1 270 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 CSRNP2Q9H175 543 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 MIOSQ9NXC5 875 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 ANKFY1Q9P2R3 1169 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 CACNG4Q9UBN1 327 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 PCDHA12Q9UN75 941 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 NEUROG3Q9Y4Z2 214 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 PCDHGA5Q9Y5G8 931 aa10.77□□□□□ -0.69
USP39-212ENST00000465514 CYSRT1A8MQ03 144 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 LYPLA2O95372 231 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 CCDC192P0DO97 292 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 CEACAM1P13688 526 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 HOXA6P31267 233 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 ARL2P36404 184 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 PXNP49023 591 aaPredicted RBP10.76□□□□□ -0.69
USP39-212ENST00000465514 MBTD1Q05BQ5 628 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 POU5F1BQ06416 359 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 CAPSQ13938 189 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 ANKRD1Q15327 319 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 CALCRLQ16602 461 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 AMHR2Q16671 573 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 COL28A1Q2UY09 1125 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 FAM78AQ5JUQ0 283 aa10.76□□□□□ -0.69
USP39-212ENST00000465514 VITQ6UXI7 678 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms