RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ARHGEF38Q9NXL2 777 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 AHCYL2Q96HN2 611 aaKnown RBP18.1■□□□□ 0.49
COL27A1-201ENST00000356083 ELP3Q9H9T3 547 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 NMRK2Q9NPI5 230 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 IP6K2Q9UHH9 426 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 RWDD2AQ9UIY3 292 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 ABCE1P61221 599 aaKnown RBP18.1■□□□□ 0.49
COL27A1-201ENST00000356083 C11orf88Q6PI97 169 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 APOBEC3FQ8IUX4 373 aaKnown RBP18.1■□□□□ 0.49
COL27A1-201ENST00000356083 SH3GL3Q99963 347 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 CCDC3Q9BQI4 270 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 ABI2Q9NYB9 513 aaPredicted RBP18.1■□□□□ 0.49
COL27A1-201ENST00000356083 A0A087WUV0 522 aaPredicted RBP18.1■□□□□ 0.49
COL27A1-201ENST00000356083 USP17L5A8MUK1 530 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 ZBTB39O15060 712 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 RANBP1P43487 201 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 EIF3BP55884 814 aaKnown RBP18.1■□□□□ 0.49
COL27A1-201ENST00000356083 CUL4AQ13619 759 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 MRPS26Q9BYN8 205 aaKnown RBP18.1■□□□□ 0.49
COL27A1-201ENST00000356083 PCDHB6Q9Y5E3 794 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 KDM5AP29375 1690 aaKnown RBP18.1■□□□□ 0.49
COL27A1-201ENST00000356083 PEX1O43933 1283 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 CYP2B6P20813 491 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 BBS7Q8IWZ6 715 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 RHOT2Q8IXI1 618 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 VPS50Q96JG6 964 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 RNF146Q9NTX7 359 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 PRR12Q9ULL5 1215 aa18.1■□□□□ 0.49
COL27A1-201ENST00000356083 ALCAMQ13740 583 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 KLHL38Q2WGJ6 581 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 TMEM179Q6ZVK1 233 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 XXYLT1Q8NBI6 393 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 EIF2AK4Q9P2K8 1649 aaKnown RBP18.09■□□□□ 0.49
COL27A1-201ENST00000356083 POTEFA5A3E0 1075 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 POTEIP0CG38 1075 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 FOXR1Q6PIV2 292 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 POTEGQ6S5H5 508 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 POTEEQ6S8J3 1075 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 FGFR1P11362 822 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 STAT3P40763 770 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 PRIM2P49643 509 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 MOV10L1Q9BXT6 1211 aaKnown RBP18.09■□□□□ 0.49
COL27A1-201ENST00000356083 C2orf40Q9H1Z8 148 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 MFSD1Q9H3U5 465 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 OLFML3Q9NRN5 406 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 GID8Q9NWU2 228 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 CTTNBP2Q8WZ74 1663 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 ZNF445P59923 1031 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 C20orf96Q9NUD7 363 aaPredicted RBP18.09■□□□□ 0.49
COL27A1-201ENST00000356083 PHKG2P15735 406 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 RAB14P61106 215 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 NCAPHQ15003 741 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 SYNE4Q8N205 404 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 MRPL1Q9BYD6 325 aaKnown RBP18.09■□□□□ 0.49
COL27A1-201ENST00000356083 COPS7BQ9H9Q2 264 aaPredicted RBP18.09■□□□□ 0.49
COL27A1-201ENST00000356083 ZFYVE9O95405 1425 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 POLRMTO00411 1230 aaKnown RBP18.09■□□□□ 0.49
COL27A1-201ENST00000356083 TBXAS1P24557 533 aaPredicted RBP18.09■□□□□ 0.49
COL27A1-201ENST00000356083 INPP5AQ14642 412 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 OTOAQ7RTW8 1153 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 HAUS6Q7Z4H7 955 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 CCDC103Q8IW40 242 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 SPRTNQ9H040 489 aaPredicted RBP18.09■□□□□ 0.49
COL27A1-201ENST00000356083 FEM1BQ9UK73 627 aa18.09■□□□□ 0.49
COL27A1-201ENST00000356083 KRT75O95678 551 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 ALDH7A1P49419 539 aaKnown RBP18.08■□□□□ 0.49
COL27A1-201ENST00000356083 PLOD1Q02809 727 aaPredicted RBP18.08■□□□□ 0.49
COL27A1-201ENST00000356083 ARHGAP15Q53QZ3 475 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 C10orf120Q5SQS8 335 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 NDOR1Q9UHB4 597 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 TK2O00142 265 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 TNNI3P19429 210 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 CASP1P29466 404 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 SLC30A5Q8TAD4 765 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 TASP1Q9H6P5 420 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 SNX8Q9Y5X2 465 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 CNTRLQ7Z7A1 2325 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 TOP2BQ02880 1626 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 MMP1P03956 469 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 PKP1Q13835 747 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 NPHS2Q9NP85 383 aa18.08■□□□□ 0.49
COL27A1-201ENST00000356083 ECE2O60344 883 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 PROSER3Q2NL68 480 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 RPS6KB2Q9UBS0 482 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 ZBTB1Q9Y2K1 713 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 PPP6R2O75170 966 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 PARNO95453 639 aaKnown RBP18.08■□□□□ 0.48
COL27A1-201ENST00000356083 CHGBP05060 677 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 ARFIP2P53365 341 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 TAF1CQ15572 869 aaPredicted RBP18.08■□□□□ 0.48
COL27A1-201ENST00000356083 OLFML2BQ68BL8 750 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 AIFM3Q96NN9 605 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 NOP53Q9NZM5 478 aaKnown RBP18.08■□□□□ 0.48
COL27A1-201ENST00000356083 PCCAP05165 728 aaPredicted RBP18.08■□□□□ 0.48
COL27A1-201ENST00000356083 PCNAP12004 261 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 AKAP5P24588 427 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 GSTA3Q16772 222 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 DCAF6Q58WW2 860 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 IPMKQ8NFU5 416 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms