RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ANKMY2Q8IV38 441 aa13.85□□□□□ -0.19
SNED1-201ENST00000310397 THNSL1Q8IYQ7 743 aa13.85□□□□□ -0.19
SNED1-201ENST00000310397 BEST2Q8NFU1 509 aa13.85□□□□□ -0.19
SNED1-201ENST00000310397 RAPGEF5Q92565 580 aa13.85□□□□□ -0.19
SNED1-201ENST00000310397 ACAP3Q96P50 834 aa13.85□□□□□ -0.19
SNED1-201ENST00000310397 MANSC1Q9H8J5 431 aa13.85□□□□□ -0.19
SNED1-201ENST00000310397 LRRIQ3A6PVS8 624 aaPredicted RBP13.85□□□□□ -0.19
SNED1-201ENST00000310397 HNRNPRO43390 633 aaKnown RBP13.85□□□□□ -0.19
SNED1-201ENST00000310397 SNRPAP09012 282 aaKnown RBP13.85□□□□□ -0.19
SNED1-201ENST00000310397 HIC2Q96JB3 615 aa13.85□□□□□ -0.19
SNED1-201ENST00000310397 REEP2Q9BRK0 252 aa13.85□□□□□ -0.19
SNED1-201ENST00000310397 RAB21Q9UL25 225 aa13.85□□□□□ -0.19
SNED1-201ENST00000310397 M0QYV0 167 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 ANGPT2O15123 496 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 HUS1O60921 280 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 TMCC1O94876 653 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 YWHABP31946 246 aaKnown RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 DSG1Q02413 1049 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 LVRNQ6Q4G3 990 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 NAF1Q96HR8 494 aaKnown RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 MAGEB18Q96M61 343 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 NAGPAQ9UK23 515 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 MAGEA13PA6NCF6 341 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 EIF4E1BA6NMX2 242 aaKnown RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 SYF2O95926 243 aaKnown RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 CRKP46108 304 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 KCNQ4P56696 695 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 CYTH1Q15438 398 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 KIF2BQ8N4N8 673 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 FBXO40Q9UH90 709 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 C9orf72Q96LT7 481 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 RAB6BQ9NRW1 208 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 KCND1Q9NSA2 647 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 HSPBP1Q9NZL4 362 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 APBA3O96018 575 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 EFNA5P52803 228 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 ERVK-24P63145 666 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 PTPAQ15257 358 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 CASZ1Q86V15 1759 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 PPP1R2P1Q96PQ5 205 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 CELF4Q9BZC1 486 aaKnown RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 COL15A1P39059 1388 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 PTK7Q13308 1070 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 TMCO5AQ8N6Q1 288 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 NSUN4Q96CB9 384 aaKnown RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 TMBIM4Q9HC24 238 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 PALMDQ9NP74 551 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 IRAK4Q9NWZ3 460 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 HPS5Q9UPZ3 1129 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 LMTK2Q8IWU2 1503 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 ZNF335Q9H4Z2 1342 aaPredicted RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 COMTP21964 271 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 IFT43Q96FT9 208 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 HERC5Q9UII4 1024 aaKnown RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 GRID1Q9ULK0 1009 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 CNTNAP5Q8WYK1 1306 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 PRAMEP78395 509 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 AASDHQ4L235 1098 aaPredicted RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 CASKIN2Q8WXE0 1202 aa13.84□□□□□ -0.19
SNED1-201ENST00000310397 DHX35Q9H5Z1 703 aaKnown RBP13.84□□□□□ -0.19
SNED1-201ENST00000310397 B2RBV5 119 aa13.83□□□□□ -0.19
SNED1-201ENST00000310397 HABP4Q5JVS0 413 aaKnown RBP13.83□□□□□ -0.19
SNED1-201ENST00000310397 PRPF39Q86UA1 669 aaKnown RBP13.83□□□□□ -0.19
SNED1-201ENST00000310397 PGBD4Q96DM1 585 aa13.83□□□□□ -0.19
SNED1-201ENST00000310397 PAK5Q9P286 719 aa13.83□□□□□ -0.19
SNED1-201ENST00000310397 PSMD3O43242 534 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 SNAP25P60880 206 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 C4orf33Q8N1A6 199 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 ZNF555Q8NEP9 628 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 SNAP23O00161 211 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 SLC30A5Q8TAD4 765 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 POLR3FQ9H1D9 316 aaPredicted RBP13.83□□□□□ -0.2
SNED1-201ENST00000310397 CD248Q9HCU0 757 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 ZNF302Q9NR11 478 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 ZNF229Q9UJW7 825 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 PCDHA10Q9Y5I2 948 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 RARGP13631 454 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 COILP38432 576 aaPredicted RBP13.83□□□□□ -0.2
SNED1-201ENST00000310397 NPEPPSP55786 919 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 GEMIN4P57678 1058 aaKnown RBP13.83□□□□□ -0.2
SNED1-201ENST00000310397 TRIP10Q15642 601 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 KLHDC7AQ5VTJ3 777 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 ALG13Q9NP73 1137 aaKnown RBP13.83□□□□□ -0.2
SNED1-201ENST00000310397 AURKCQ9UQB9 309 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 CDH2P19022 906 aaPredicted RBP13.83□□□□□ -0.2
SNED1-201ENST00000310397 SERPINB3P29508 390 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 KLK7P49862 253 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 ITGA8P53708 1063 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 ANTXR2P58335 489 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 C1orf228Q6PIY5 440 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 RCN1Q15293 331 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 SNRNP35Q16560 246 aaKnown RBP13.83□□□□□ -0.2
SNED1-201ENST00000310397 ANGPTL8Q6UXH0 198 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 ULK4Q96C45 1275 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 OLA1Q9NTK5 396 aaKnown RBP13.83□□□□□ -0.2
SNED1-201ENST00000310397 HOXC10Q9NYD6 342 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 SMARCAL1Q9NZC9 954 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 GABBR1Q9UBS5 961 aa13.83□□□□□ -0.2
SNED1-201ENST00000310397 hCG_2014768A0A024R1R8 64 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms