RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SNTG2Q9NY99 539 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 SMARCAL1Q9NZC9 954 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 MTUS1Q9ULD2 1270 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 ARFGEF1Q9Y6D6 1849 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 IGKV6D-21A0A0A0MT36 114 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 C22orf31O95567 290 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 SLC10A3P09131 477 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 AKAP5P24588 427 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 ZNF200P98182 395 aaPredicted RBP9.96□□□□□ -0.81
SSR3-201ENST00000265044 ZACNQ401N2 412 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 GLIPR1L2Q4G1C9 344 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 RNF180Q86T96 592 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 ERICH1Q86X53 443 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 TMEM35BQ8NCS4 154 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 ZNF564Q8TBZ8 553 aaPredicted RBP9.96□□□□□ -0.81
SSR3-201ENST00000265044 NAP1L3Q99457 506 aaPredicted RBP9.96□□□□□ -0.81
SSR3-201ENST00000265044 MINDY3Q9H8M7 445 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 OSGEPQ9NPF4 335 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 SNX12Q9UMY4 172 aa9.96□□□□□ -0.81
SSR3-201ENST00000265044 KAT6AQ92794 2004 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 LACTBL1A8MY62 500 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 TREHO43280 583 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 PRKAR2AP13861 404 aaKnown RBP9.96□□□□□ -0.82
SSR3-201ENST00000265044 EIF4BP23588 611 aaKnown RBP9.96□□□□□ -0.82
SSR3-201ENST00000265044 GUCY2FP51841 1108 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 RBP5P82980 135 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 PRKCZQ05513 592 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 PLEKHO2Q8TD55 490 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 HPDLQ96IR7 371 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 MS4A14Q96JA4 679 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 KRT12Q99456 494 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 MTG1Q9BT17 334 aaPredicted RBP9.96□□□□□ -0.82
SSR3-201ENST00000265044 AP1M1Q9BXS5 423 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 L2HGDHQ9H9P8 463 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 AJAP1Q9UKB5 411 aaPredicted RBP9.96□□□□□ -0.82
SSR3-201ENST00000265044 DAAM1Q9Y4D1 1078 aa9.96□□□□□ -0.82
SSR3-201ENST00000265044 ATAD5Q96QE3 1844 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 MSCO60682 206 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 TOMM70O94826 608 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 STBD1O95210 358 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 ANXA13P27216 316 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 ZNF211Q13398 564 aaPredicted RBP9.95□□□□□ -0.82
SSR3-201ENST00000265044 KYAT1Q16773 422 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 DNAJC24Q6P3W2 148 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 TAS1R3Q7RTX0 852 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 MSL3Q8N5Y2 521 aaKnown RBP9.95□□□□□ -0.82
SSR3-201ENST00000265044 TRIM11Q96F44 468 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 FGD4Q96M96 766 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 ZIC5Q96T25 663 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 PARD6BQ9BYG5 372 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 SNX25Q9H3E2 840 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 FBXL5Q9UKA1 691 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 TNFSF13BQ9Y275 285 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 TTLL13PA6NNM8 815 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 MED7O43513 233 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 ZC3H11AO75152 810 aaKnown RBP eCLIP9.95□□□□□ -0.824e-6■■□□□ 14.4
SSR3-201ENST00000265044 SLC7A5Q01650 507 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 CCDC26Q8TAB7 109 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.95□□□□□ -0.82
SSR3-201ENST00000265044 ARHGAP39Q9C0H5 1083 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 MRPL47Q9HD33 250 aaKnown RBP9.95□□□□□ -0.82
SSR3-201ENST00000265044 PDE4DIPQ5VU43 2346 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 MCF2P10911 925 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 BRD2P25440 801 aaKnown RBP9.95□□□□□ -0.82
SSR3-201ENST00000265044 PRKCIP41743 596 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 CDR2Q01850 454 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 NOP9Q86U38 636 aaKnown RBP9.95□□□□□ -0.82
SSR3-201ENST00000265044 ZNF410Q86VK4 478 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 ZC3H3Q8IXZ2 948 aaKnown RBP9.95□□□□□ -0.82
SSR3-201ENST00000265044 LRRN4CLQ8ND94 238 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 COG1Q8WTW3 980 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 SIX2Q9NPC8 291 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 PDLIM7Q9NR12 457 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 CISHQ9NSE2 258 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 DPP3Q9NY33 737 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 TAS2R14Q9NYV8 317 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 EHD2Q9NZN4 543 aa9.95□□□□□ -0.82
SSR3-201ENST00000265044 GPR25O00155 361 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 POLR3GO15318 223 aaPredicted RBP9.94□□□□□ -0.82
SSR3-201ENST00000265044 TADA3O75528 432 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 CST3P01034 146 aaPredicted RBP9.94□□□□□ -0.82
SSR3-201ENST00000265044 TMEM253P0C7T8 217 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 RAP1GAPP47736 663 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 CDH8P55286 799 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 GCNT1Q02742 428 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 JADE1Q6IE81 842 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 MAMDC4Q6UXC1 1216 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 GSTA5Q7RTV2 222 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 CYFIP2Q96F07 1278 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 CCDC114Q96M63 670 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 KREMEN1Q96MU8 473 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 C16orf70Q9BSU1 422 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 MED10Q9BTT4 135 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 STRA6Q9BX79 667 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 TLL2Q9Y6L7 1015 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 PGRMC1O00264 195 aaKnown RBP9.94□□□□□ -0.82
SSR3-201ENST00000265044 PIK3R2O00459 728 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 BUB1BO60566 1050 aaPredicted RBP9.94□□□□□ -0.82
SSR3-201ENST00000265044 FGGP02679 453 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 TUBBP07437 444 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms