RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 C16orf86Q6ZW13 317 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 ADCK2Q7Z695 626 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 TAGAPQ8N103 731 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 CRAMP1Q96RY5 1269 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 KCNF1Q9H3M0 494 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 AURKCQ9UQB9 309 aa19.68■□□□□ 0.74
SMARCC1-201ENST00000254480 RPS6KA5O75582 802 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 MAP3K6O95382 1288 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 ENO1P06733 434 aaKnown RBP19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 MUC3BQ9H195 1237 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 RFX7Q2KHR2 1363 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 ASAP2O43150 1006 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 MCF2P10911 925 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 DPEP1P16444 411 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 SPDYAQ5MJ70 313 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 SLC7A14Q8TBB6 771 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 L3MBTL3Q96JM7 780 aaPredicted RBP19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 MYOZ2Q9NPC6 264 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 XPO7Q9UIA9 1087 aaKnown RBP19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 TET3O43151 1660 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 PRRG1O14668 218 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 TLR2O60603 784 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 NUP93Q8N1F7 819 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 NRBF2Q96F24 287 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 YIPF2Q9BWQ6 316 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 VCPKMTQ9H867 229 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 FAM187AA6NFU0 413 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 BRD2P25440 801 aaKnown RBP19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 KCNJ1P48048 391 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 ST13P4Q8IZP2 240 aaPredicted RBP19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 PGBD3Q8N328 593 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 RIN2Q8WYP3 895 aaPredicted RBP19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 SENP7Q9BQF6 1050 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 SPON1Q9HCB6 807 aa19.67■□□□□ 0.74
SMARCC1-201ENST00000254480 ADCY10Q96PN6 1610 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 HLA-DRAP01903 254 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 AARSP49588 968 aaKnown RBP eCLIP19.66■□□□□ 0.742e-6■■■■□ 23.5
SMARCC1-201ENST00000254480 ELMO2Q96JJ3 720 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 STK33Q9BYT3 514 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 CELF4Q9BZC1 486 aaKnown RBP19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 TRABDQ9H4I3 376 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 NOP53Q9NZM5 478 aaKnown RBP19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 CHMP2BQ9UQN3 213 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 GH1P01241 217 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 SNAPC2Q13487 334 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 DCAF6Q58WW2 860 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 ATF7IP2Q5U623 682 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 PPHLN1Q8NEY8 458 aaKnown RBP19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 CCSER1Q9C0I3 900 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 DEFB129Q9H1M3 183 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 TMCC1O94876 653 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 CSE1LP55060 971 aaKnown RBP19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 SLC18A3Q16572 532 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 SNX12Q9UMY4 172 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 NPTXRO95502 500 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 AKT1P31749 480 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 LRRC36Q1X8D7 754 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 ATL2Q8NHH9 583 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 DACH2Q96NX9 599 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 MTA3Q9BTC8 594 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 HACL1Q9UJ83 578 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 CHD1O14646 1710 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 CCL15-CCL14A0A0B4J2E2 113 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 GTF2H1P32780 548 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 RAD51Q06609 339 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 NR1H3Q13133 447 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 CCL15Q16663 113 aa19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 ZNF513Q8N8E2 541 aaPredicted RBP19.66■□□□□ 0.74
SMARCC1-201ENST00000254480 NTSR2O95665 410 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 IFNA8P32881 189 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 DCUN1D1Q96GG9 259 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 TARS2Q9BW92 718 aaKnown RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 NPHS2Q9NP85 383 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 PCMTD2Q9NV79 361 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.65■□□□□ 0.741e-12■□□□□ 8.9
SMARCC1-201ENST00000254480 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 MEFVO15553 781 aaPredicted RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 TAL1P17542 331 aaPredicted RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 TRIM28Q13263 835 aaKnown RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 SF3B3Q15393 1217 aaKnown RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 DDX42Q86XP3 938 aaKnown RBP eCLIP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 ATPAF2Q8N5M1 289 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 KCNH7Q9NS40 1196 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 CLCA2Q9UQC9 943 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 AP1ARQ63HQ0 302 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 EEF2KO00418 725 aaKnown RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 SRGNP10124 158 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 HLA-DPA1P20036 260 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 RNF168Q8IYW5 571 aaPredicted RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 TEKT4Q8WW24 435 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 C7orf25Q9BPX7 421 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 MYO1CO00159 1063 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 ZFXP17010 805 aaPredicted RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 KCNJ6P48051 423 aa19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 ZC3H12BQ5HYM0 836 aaKnown RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 RBM15Q96T37 977 aaKnown RBP eCLIP19.65■□□□□ 0.746e-7■□□□□ 10.9
SMARCC1-201ENST00000254480 PRG3Q9Y2Y8 225 aaPredicted RBP19.65■□□□□ 0.74
SMARCC1-201ENST00000254480 KBTBD13C9JR72 458 aa19.64■□□□□ 0.74
SMARCC1-201ENST00000254480 PDAP1Q13442 181 aaKnown RBP19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms