RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Celf4Q7TSY6 486 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Cadm1Q8R5M8 456 aaKnown RBP17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Zswim7Q9CWQ2 152 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tlr8P58682 1032 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Cdca2Q14B71 982 aaKnown RBP17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Srek1ip1Q4V9W2 153 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 SpdyaQ5IBH7 310 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ccdc90bQ8C3X2 256 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 DnerQ8JZM4 737 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Agap3Q8VHH5 910 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rpap3Q9D706 660 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 1700123K08RikQ9D991 295 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Dip2bQ3UH60 1574 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 D830030K20RikE9PYQ5 218 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gm3043K7N693 218 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gm16440K7N6G6 218 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gm2244L7N2A3 218 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gm3278L7N2D2 218 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gm8271L7N2E2 218 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 KitP05532 979 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pdha1P35486 390 aaKnown RBP17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Atp13a5Q3TYU2 1216 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Trappc3lQ4KL14 181 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ppp1r13lQ5I1X5 824 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Fbxo10Q7TQF2 950 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Trim35Q8C006 501 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ttc4Q8R3H9 386 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Trpd52l3Q9CQ14 231 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 BcamQ9R069 622 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 PdgfraP26618 1089 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Scg3P47867 471 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gsdmc4Q3TR54 480 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 D630036H23RikQ3UQD6 204 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 TdrkhQ80VL1 560 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Q8BGD0 127 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 NemfQ8CCP0 1064 aaKnown RBP17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Anxa13Q99JG3 317 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rgs10Q9CQE5 181 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Asah2Q9JHE3 756 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 StrnO55106 780 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Aff1O88573 1216 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Serpinh1P19324 417 aaKnown RBP17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 FntaQ61239 377 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Lrfn2Q80TG9 788 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ddx42Q810A7 929 aaKnown RBP17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tmem39bQ810L4 492 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Nim1kQ8BHI9 436 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Cgref1Q8R1U2 281 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Dach2Q925Q8 634 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 RpainQ9CWY9 219 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Chit1Q9D7Q1 464 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tekt1Q9DAJ2 418 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Dnajc7Q9QYI3 494 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rabgap1lA6H6A9 815 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 4930444G20RikD3Z741 495 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Chil3O35744 398 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rps6P62754 249 aaKnown RBP17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ttc39dQ0VF76 604 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Vmn2r43Q80Z08 845 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Vps37aQ8CHS8 397 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pcdhb11Q91UZ8 797 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tmx2Q9D710 295 aaKnown RBP17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ccdc97Q9DBT3 340 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Xpo7Q9EPK7 1087 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 C130060K24RikG3UWA8 416 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Bcat1P24288 386 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Znf746Q3U133 652 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Spc25Q3UA16 226 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 CybbQ61093 570 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Lrrc8eQ66JT1 795 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Scaf8Q6DID3 1268 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rnf168Q80XJ2 565 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Clec4gQ8BNX1 294 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ppp1r12aQ9DBR7 1029 aaKnown RBP17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 EtfbQ9DCW4 255 aaKnown RBP17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Scgb2b20Q9JI02 112 aa17.44■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Igsf9bE9PZ19 1328 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Mindy4b-psA0A1W2P7H6 457 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 FscbA1EGX6 1074 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Usp35M0QWN7 1009 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 RalaP63321 206 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gm7247Q6UY52 187 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tigd4Q8BUZ3 513 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Epc2Q8C0I4 808 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Dclre1bQ8C7W7 541 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Trpm8Q8R4D5 1104 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ddx47Q9CWX9 455 aaKnown RBP17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Eif2ak3Q9Z2B5 1114 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Kiaa0232Q80U59 1396 aaKnown RBP17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Zscan4-ps3A0A1B0GRH6 506 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Zscan4-ps2A0A1C7CYU6 506 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Magea6O89010 325 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Fgl2P12804 432 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 LmnaP48678 665 aaKnown RBP17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rnf10Q3UIW5 804 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Klra5Q60652 266 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Magea3Q6T340 320 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Q9CYI0 393 aa17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Cdc42ep4Q9JM96 349 aaKnown RBP17.43■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pdcd2P46718 343 aa17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms